# Exploring lactic acid bacteria from fresh fruits, vegetables, and edible flowers: from biodiversity valorisation to food applications

**Authors:** Ester Presutto, Vittorio Capozzi, Maria Lucia Valeria de Chiara, Djamel Drider, Giuseppe Spano, Mariagiovanna Fragasso

PMC · DOI: 10.1007/s11274-026-04872-7 · 2026-03-06

## TL;DR

This paper reviews lactic acid bacteria found in fresh fruits, vegetables, and flowers, exploring their roles in food quality and potential biotech applications.

## Contribution

This is the first review integrating genomic and ecological insights of lactic acid bacteria in fresh plant matrices.

## Key findings

- Lactic acid bacteria contribute to food quality through fermentation and bioprotection.
- Recent studies highlight their adaptability to plant-specific stressors and functional traits.
- Potential applications include probiotics, biocontrol, and fermented plant-based foods.

## Abstract

Fresh plant matrices of food interest host complex microbial communities. Within these microbial ecosystems, biochemical and ecological interactions are relevant in contributing to food quality and safety. In particular, lactic acid bacteria (LAB) play key roles in fermentative processes, bioprotection, and bioactivity. Despite their well-recognised importance in food biotechnology, the ecological dynamics and metabolic versatility of LAB in plant-based environments are still poorly explored. Understanding their diversity and how they adapt to matrix-specific stressors is crucial for identifying new strains with distinctive technological and biofunctional traits. This review summarises a selection of recent studies on LAB associated with fresh plant-derived matrices (i.e., fresh fruits, vegetables, and edible flowers). Particular attention is given to culture-dependent and culture-independent approaches employed for their identification. The main technological and functional aspects are also examined, aiming to assess their properties of interest, including resistance to adverse environmental conditions and mechanisms of microbial interaction. Furthermore, the discussion addresses the main biotechnological applications of selected LAB, including the development of fermented plant-based foods and beverages, the design of probiotic cultures/biocontrol solutions, and the valorisation of plant by-products. To our knowledge, this is the first review to provide an integrated overview of genomic and ecological insights into LAB associated with fresh plant matrices. This approach would help to improve understanding of LAB adaptive dynamics and identify sustainable drivers of innovation in agro-food systems.

## Full-text entities

- **Diseases:** microbial infections (MESH:D015163), inflammatory (MESH:D007249), fungal (MESH:D009181), haemolytic (MESH:D006463)
- **Chemicals:** peptides (MESH:D010455), indoles (MESH:D007211), biogenic amines (MESH:D001679), glucosinolates (MESH:D005961), isothiocyanates (MESH:D017879), cholesterol (MESH:D002784), galactans (MESH:D005685), CaCO3 (MESH:D002119), sugar (MESH:D000073893), nitrogen (MESH:D009584), EDTA (MESH:D004492), lactic acid (MESH:D019344), polysaccharide (MESH:D011134), glucans (MESH:D005936), carbon (MESH:D002244), polyphenols (MESH:D059808), fructose (MESH:D005632), sucrose (MESH:D013395), lipids (MESH:D008055), caffeic acid (MESH:C040048), Tween 80 (MESH:D011136), NAD+ (MESH:D009243), flavonoids (MESH:D005419), glucose (MESH:D005947), dextran (MESH:D003911), FYP agar (-), amino acids (MESH:D000596), carbohydrate (MESH:D002241)
- **Species:** Enterococcus faecalis (species) [taxon 1351], Enterococcus hirae (species) [taxon 1354], Enterococcus casseliflavus (species) [taxon 37734], Weissella viridescens (species) [taxon 1629], Weissella oryzae (species) [taxon 1129792], Acinetobacter sp. CP-B (species) [taxon 464739], Weissella bombi (species) [taxon 1505725], Fungi (kingdom) [taxon 4751], Allium sativum (garlic, species) [taxon 4682], Carica papaya (mamon, species) [taxon 3649], Weissella soli (species) [taxon 155866], Weissella cibaria (species) [taxon 137591], Pediococcus pentosaceus (species) [taxon 1255], Medicago sativa (alfalfa, species) [taxon 3879], Lactococcus sp. (species) [taxon 44273], Lactobacillus sp. (species) [taxon 1591], Weissella paramesenteroides (species) [taxon 1249], Enterococcus sp. (species) [taxon 35783], Malus domestica (apple, species) [taxon 3750], Escherichia coli (E. coli, species) [taxon 562], Prunus persica (peach, species) [taxon 3760], Fructobacillus (genus) [taxon 559173], Caenorhabditis elegans (species) [taxon 6239], Mus musculus (house mouse, species) [taxon 10090], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Musa acuminata (banana, species) [taxon 4641], Acinetobacter (genus) [taxon 469], Enterococcus durans (species) [taxon 53345], Lacticaseibacillus rhamnosus (species) [taxon 47715], Weissella (genus) [taxon 46255], Laonice sp. MB (species) [taxon 1931142], Pseudomonas (RNA similarity group I, genus) [taxon 286], Cocos nucifera (coconut palm, species) [taxon 13894], Weissella confusa (species) [taxon 1583], Botrytis cinerea (gray fruit mold, species) [taxon 40559], Ananas comosus (pineapple, species) [taxon 4615], Enterococcus faecium (species) [taxon 1352], Pantoea (genus) [taxon 53335], Streptococcus (genus) [taxon 1301], Ochrobactrum (genus) [taxon 528], Enterococcus pseudoavium (species) [taxon 44007], Daucus carota (carrot, species) [taxon 4039], Danio rerio (leopard danio, species) [taxon 7955], Leptospira sp. AB (species) [taxon 103236], Leuconostoc sp. (species) [taxon 1930076], Homo sapiens (human, species) [taxon 9606], Pediococcus acidilactici (species) [taxon 1254]
- **Cell lines:** Caco-2 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0025)

## Figures

1 figure with captions in the complete paper: https://tomesphere.com/paper/PMC12966196/full.md

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Source: https://tomesphere.com/paper/PMC12966196