# Genome-wide dissection of PP2 genes reveals CsPP2-3/5/18 as key regulators of phloem protein deposition and bacterial immunity in Citrus sinensis

**Authors:** Wenshan Dai, Tao Hu, Donglian Huang, Yangyang Qin, Nannan Wei, Huanying Xue, Nian Wang, Min Wang

PMC · DOI: 10.1093/hr/uhaf333 · 2025-12-04

## TL;DR

This study identifies key genes in citrus plants that regulate phloem protein deposition and influence resistance to a devastating citrus disease.

## Contribution

The paper systematically identifies and functionally characterizes PP2 genes in citrus, revealing their roles in phloem defense and bacterial immunity.

## Key findings

- CsPP2-3, CsPP2-5, and CsPP2-18 are phloem-specific genes that regulate phloem protein deposition.
- Overexpression of these genes enhances resistance to Xanthomonas citri subsp. citri.
- CsPP2-3 and CsPP2-18 enhance CLas resistance, while CsPP2-5 increases susceptibility.

## Abstract

Citrus Huanglongbing (HLB), caused by the phloem-restricted bacterium Candidatus Liberibacter asiaticus (CLas), is a devastating disease threatening global citrus production. CLas infection triggers excessive accumulation of phloem proteins (PPs) that obstruct sieve pores, a dual-edged process potentially restricting pathogen spread while impairing phloem transport. Despite its pathophysiological significance, systematic identification and functional characterization of PPs in citrus, particularly their roles in CLas defense, remain unclear. Here, we performed a genome-wide analysis of the PP2 gene family in the HLB-susceptible sweet orange (Citrus sinensis) and identified 26 CsPP2 genes. Phylogenetic and structural analyses uncovered evolutionary divergence and regulatory complexity among CsPP2 family members. Using promoter-driven GUS gene expression assays in transgenic hairy roots, we identified three phloem-specific paralogs, CsPP2-3, CsPP2-5, and CsPP2-18, and delineated core regulatory regions conferring tissue specificity. Overexpression of each gene significantly enhanced phloem protein deposition. Notably, although virus-induced silencing of individual CsPP2s did not affect resistance to Xanthomonas citri subsp. citri, overexpression of any of the three genes substantially enhanced resistance against this apoplastic pathogen, demonstrating functional redundancy. However, the three paralogs exhibited marked functional divergence in response to CLas: CsPP2-3 and CsPP2-18 conferred enhanced resistance, whereas CsPP2-5 increased susceptibility. Distinct defense-related gene expression profiles further supported their specialized immune roles. Our study provides the first systematic identification of PP2 genes in citrus and reveals the functional differentiation of CsPP2-3/5/18 as key regulators of phloem-mediated defense. These findings provide crucial insights into phloem defense regulatory networks and identify novel genetic targets for HLB resistance breeding.

## Linked entities

- **Genes:** NPY6RP (neuropeptide Y receptor Y6, pseudogene) [NCBI Gene 4888]
- **Species:** Citrus sinensis (taxon 2711), Candidatus Liberibacter asiaticus (taxon 34021)

## Full-text entities

- **Genes:** NAC [NCBI Gene 102614575], ERF [NCBI Gene 102618338], Actin [NCBI Gene 102612981]
- **Diseases:** necrotic lesions (MESH:D009059), stunting (MESH:D006130), salt (MESH:D013651), citrus canker (MESH:D013281), leaf chlorosis (MESH:D000747), necrotic (MESH:D009336), hypersensitivity (MESH:D004342), bacterial disease (MESH:D001424), red-nosed' fruit deformities (MESH:D009668), CLas infection (MESH:D007239)
- **Chemicals:** 2-(N-morpholino) ethanesulfonic acid (MESH:C004550), gibberellin (MESH:D005875), water (MESH:D014867), nitrogen (MESH:D009584), SA (MESH:D020156), sugars (MESH:D000073893), phosphate (MESH:D010710), ABA (MESH:D000040), ETH (MESH:C005073), MgCl2 (MESH:D015636), paraffin (MESH:D010232), auxin (MESH:D007210), ROS (MESH:D017382), JA (MESH:C011006), alcohol (MESH:D000438), glutaraldehyde (MESH:D005976), GA (MESH:D005708), agarose (MESH:D012685), acetosyringone (MESH:C051667), acetone (MESH:D000096), starch (MESH:D013213), CTAB (MESH:D000077286), amino acids (MESH:D000596), Na+ (MESH:D012964), CLas (-)
- **Species:** Nicotiana tabacum (American tobacco, species) [taxon 4097], Citrus (genus) [taxon 2706], Citrus x aurantiifolia (lime, species) [taxon 159033], Tetranychus urticae (red spider mite, species) [taxon 32264], C. sinensis [taxon 128511], Gossypium hirsutum (American cotton, species) [taxon 3635], Candidatus Liberibacter asiaticus (species) [taxon 34021], Citrus x paradisi (grapefruit, species) [taxon 37656], Phytophthora infestans (potato late blight agent, species) [taxon 4787], Fusarium solani (species) [taxon 169388], Citrus sinensis (apfelsine, species) [taxon 2711], Boehmeria nivea (Chinese silk-plant, species) [taxon 83906], Agrobacterium tumefaciens (species) [taxon 358], Martinezella rhizogenes (species) [taxon 359], Botrytis cinerea (gray fruit mold, species) [taxon 40559], Cucumis sativus (cucumber, species) [taxon 3659], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Nicotiana benthamiana (species) [taxon 4100], Phyllostachys edulis (moso bamboo, species) [taxon 38705], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702]
- **Cell lines:** GV3101 — Manduca sexta (Tobacco hawkmoth), Spontaneously immortalized cell line (CVCL_A8Z7), 35S::GUS — Homo sapiens (Human), Colorectal adenoma, Cancer cell line (CVCL_8754)

## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12966013/full.md

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Source: https://tomesphere.com/paper/PMC12966013