# The expanding role of m6A RNA modification in plant-virus dynamics: friend, foe, or both?

**Authors:** Jia-Hui Liu, Hao Yu, Cheng-Guo Duan

PMC · DOI: 10.1007/s44307-026-00100-3 · 2026-03-06

## TL;DR

This paper explores how m6A RNA modification influences interactions between plants and viruses, acting as both a defense mechanism and a tool for viral survival.

## Contribution

The paper reveals the dual role of m6A in plant-virus dynamics and its impact on viral infection and host response.

## Key findings

- Plant viruses acquire m6A through host methyltransferase complexes, often mediated by viral proteins.
- m6A can either restrict viral infection by promoting RNA decay or enhance replication by stabilizing viral RNAs.
- Viral infection alters host m6A homeostasis, affecting immune and hormone pathways.

## Abstract

N6-methyladenosine (m6A), the most prevalent internal mRNA modification, regulates plant development and stress responses through modulating various mRNA metabolic processes and epigenetic effects. Although well studied in animals, its roles in plant–virus interactions have only recently begun to be elucidated. Multiple plant viruses carry m6A modifications on their RNAs, validated by MeRIP-seq, LC–MS/MS, and direct RNA sequencing. Viral RNAs acquire m6A through the recruitment or relocalization of host methyltransferase complexes, which is often mediated by viral proteins. Functionally, m6A can restrict infection by promoting viral RNA decay via YTH-domain readers and RNA surveillance pathways, or alternatively stabilize viral RNAs to enhance replication and systemic spread. In turn, viruses disrupt the functionality of host m6A machinery to promote infection. Moreover, viral infection reprograms host m6A homeostasis, altering methylation landscapes in immune and hormone pathways. These findings establish m6A as a dynamic epitranscriptomic switch in plant-virus interactions, with promising implications for antiviral strategies and crop improvement.

## Full-text entities

- **Genes:** WTAP (WT1 associated protein) [NCBI Gene 9589] {aka Mum2}, TAG1 (membrane bound O-acyl transferase (MBOAT) family protein) [NCBI Gene 816464] {aka ABX45, AS11, ATDGAT, Arabidopsis thaliana acyl-CoA:diacylglycerol acyltransferase, AtDGAT1, DGAT1}, FTO (FTO alpha-ketoglutarate dependent dioxygenase) [NCBI Gene 79068] {aka ALKBH9, BMIQ14, GDFD, IFEX9}, ECT2 (epithelial cell transforming 2) [NCBI Gene 1894] {aka ARHGEF31}, RdRP [NCBI Gene 951226], GOLPH3 (golgi phosphoprotein 3) [NCBI Gene 64083] {aka GOPP1, GPP34, MIDAS, Vps74}, ALKBH5 (alkB homolog 5, RNA demethylase) [NCBI Gene 54890] {aka ABH5, OFOXD, OFOXD1}, POR (cytochrome p450 oxidoreductase) [NCBI Gene 5447] {aka CPR, CYPOR, P450R}, CCR4 (C-C motif chemokine receptor 4) [NCBI Gene 1233] {aka CC-CKR-4, CD194, CKR4, CMKBR4, ChemR13, HGCN:14099}, METTL14 (methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit) [NCBI Gene 57721] {aka hMETTL14}, MT1JP (metallothionein 1J, pseudogene) [NCBI Gene 4498] {aka MT1, MT1J, MT1NP, MTB}, ECT8 (evolutionarily conserved C-terminal region 8) [NCBI Gene 844267] {aka evolutionarily conserved C-terminal region 8}, FIP37 (FKBP12 interacting protein 37) [NCBI Gene 824584] {aka ATFIP37, FKBP12 interacting protein 37}, EIF4A3 (eukaryotic translation initiation factor 4A3) [NCBI Gene 9775] {aka DDX48, Fal1, MUK34, NMP265, NUK34, RCPS}, CP (ceruloplasmin) [NCBI Gene 1356] {aka AB073614, CP-2}, NPR3 (natriuretic peptide receptor 3) [NCBI Gene 4883] {aka ANP-C, ANPR-C, ANPRC, BOMOS, C5orf23, GUCY2B}, CBLL1 (Cbl proto-oncogene like 1) [NCBI Gene 79872] {aka HAKAI, RNF188}, SMG7 (SMG7 nonsense mediated mRNA decay factor) [NCBI Gene 9887] {aka C1orf16, EST1C, SGA56M}, MTA (mRNAadenosine methylase) [NCBI Gene 826670] {aka EMB1706, EMBRYO DEFECTIVE 1706, T12H20.6, T12H20_6, mRNAadenosine methylase}, UPF3A (UPF3A regulator of nonsense mediated mRNA decay) [NCBI Gene 65110] {aka HUPF3A, RENT3A, UPF3}, PYL7 (PYR1-like 7) [NCBI Gene 827923] {aka PYR1-like 7, RCAR2, regulatory components of ABA receptor 2}
- **Diseases:** CMV (MESH:D014777), embryonic lethality (MESH:D020964), infection (MESH:D007239)
- **Chemicals:** m6A (MESH:C005955), jasmonic acid (MESH:C011006), ZmMTA (-), salicylic acid (MESH:D020156), ABA (MESH:D000040), N6-methyladenosine (MESH:C010223), chlorophyll (MESH:D002734)
- **Species:** Oryza sativa (Asian cultivated rice, species) [taxon 4530], Nicotiana benthamiana (species) [taxon 4100], Plum pox virus (no rank) [taxon 12211], Human gammaherpesvirus 8 (no rank) [taxon 37296], Dengue virus (no rank) [taxon 12637], Triticum aestivum (bread wheat, species) [taxon 4565], Alfamovirus AMV (species) [taxon 12321], Chikungunya virus (no rank) [taxon 37124], Influenza A virus (no rank) [taxon 11320], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Cytorhabdovirus hordei (no rank) [taxon 1985699], Solanum lycopersicum (tomato, species) [taxon 4081], Wheat yellow mosaic virus (no rank) [taxon 75746], Orthonairovirus abuminaense (species) [taxon 2843618], Bamboo mosaic virus (no rank) [taxon 35286], Potato virus Y (no rank) [taxon 12216], Tobacco mosaic virus (no rank) [taxon 12242], Nicotiana tabacum (American tobacco, species) [taxon 4097], Sugarcane mosaic virus (no rank) [taxon 12224], Human immunodeficiency virus 1 (no rank) [taxon 11676], Cucumber mosaic virus (cucumber mosaic cucumovirus, no rank) [taxon 12305], Zika virus (no rank) [taxon 64320], Pepino mosaic virus (no rank) [taxon 112229], watermelon [taxon 260674], Cucumber green mottle mosaic virus (no rank) [taxon 12235], Dendrocalamus latiflorus (sweet bamboo, species) [taxon 257763], Rice stripe virus [taxon 12331], Rice black streaked dwarf virus (no rank) [taxon 10990]
- **Mutations:** A6556 to G

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12965944/full.md

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Source: https://tomesphere.com/paper/PMC12965944