# Hypomorphic mutations in ura6 confer 5-FOA resistance in fission yeast

**Authors:** Constance Kowal, Ying Liu, Claire Denis, Benoît Arcangioli, Stefania Francesconi, Serge Gangloff, Arthur Lustig, Arthur Lustig, Arthur Lustig, Arthur Lustig

PMC · DOI: 10.1371/journal.pone.0344121 · 2026-03-06

## TL;DR

Researchers found that mutations in the ura6 gene in fission yeast allow cells to resist a toxic compound while still making uracil.

## Contribution

The study identifies hypomorphic ura6 mutations as a novel mechanism for 5-FOA resistance in fission yeast.

## Key findings

- Hypomorphic ura6 alleles confer 5-FOA resistance without loss of uracil biosynthesis.
- Non-synonymous substitutions and in-frame duplication in ura6 cluster in conserved regions.
- These mutations reduce toxic metabolite production while maintaining essential function.

## Abstract

Genome integrity is essential for cellular survival and adaptation across diverse physiological states. The fission yeast Schizosaccharomyces pombe relies on conserved DNA repair pathways to maintain genome stability during proliferative growth and in the absence of cell division (quiescence/G0). Using 5-fluoroorotic acid (5-FOA) counter-selection, we examined spontaneous mutation accumulation in both conditions in a wild-type prototrophic strain. Unexpectedly, we identified in growing and quiescent cells a class of 5-FOA–resistant mutants that, unlike canonical ura4 or ura5 loss-of-function mutants, retain the ability to grow without uracil supplementation. Genetic analyses showed that this phenotype is stable and segregates as a single locus. Whole-genome sequencing of tetrads from independent crosses revealed multiple hypomorphic alleles of ura6, which encodes the essential uridylate kinase. These alleles, comprising non-synonymous substitutions and an in-frame duplication, cluster within conserved regions of the protein and likely reduce production of the toxic 5-FOA–derived metabolite while preserving sufficient uracil biosynthesis.

## Linked entities

- **Genes:** URA6 (bifunctional uridylate/adenylate kinase) [NCBI Gene 853844], URA4 (dihydroorotase) [NCBI Gene 851139], URA5 (orotate phosphoribosyltransferase URA5) [NCBI Gene 854865]
- **Chemicals:** 5-fluoroorotic acid (PubChem CID 69711), 5-FOA (PubChem CID 69711)
- **Species:** Schizosaccharomyces pombe (taxon 4896)

## Full-text entities

- **Genes:** URA5 (orotate phosphoribosyltransferase URA5) [NCBI Gene 854865] {aka PYR5}, ADE6 (phosphoribosylformylglycinamidine synthase) [NCBI Gene 852952], URA6 (bifunctional uridylate/adenylate kinase) [NCBI Gene 853844] {aka SOC8}, URA4 (dihydroorotase) [NCBI Gene 851139], URA3 (orotidine-5'-phosphate decarboxylase) [NCBI Gene 856692]
- **Diseases:** MM (MESH:D009402), toxicity (MESH:D064420)
- **Chemicals:** adenine (MESH:D000225), glutamate (MESH:D018698), UDP (MESH:D014530), 5-FU (MESH:D005472), uracil (MESH:D014498), N (MESH:D009584), hygromycin (MESH:C026273), agar (MESH:D000362), Austin (MESH:C012757), UMP (MESH:D014542), glucose (MESH:D005947), FOAR (-), 5-FOA (MESH:C001242), Phloxine B (MESH:D010697)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Schizosaccharomyces pombe (fission yeast, species) [taxon 4896], Drosophila melanogaster (fruit fly, species) [taxon 7227], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** S33I/N, S133R, G10S, R39C, I62F, S33N, C at 180, S33I
- **Cell lines:** PB1653 — Homo sapiens (Human), Finite cell line (CVCL_7331), Pg — Homo sapiens (Human), Finite cell line (CVCL_N547), PB1623 — Homo sapiens (Human), Acute intermittent porphyria, Finite cell line (CVCL_4J34)

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12965553/full.md

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Source: https://tomesphere.com/paper/PMC12965553