# Time-dependent adaptations of damaged neurons and their microenvironment in the regenerating adult zebrafish spinal cord

**Authors:** Leslie Lafouasse, Konstantinos Koutsogiannis, Yu-Wen E. Dai, Lisa Del Vecchio, Andrea Pedroni, Dimitrios Tsagkogiannis, Judith Habicher, Konstantinos Ampatzis

PMC · DOI: 10.1126/sciadv.aea2882 · 2026-03-06

## TL;DR

Zebrafish spinal cord healing relies on timed interactions between neurons and their surroundings, including changes in the extracellular matrix.

## Contribution

The study reveals a dual role of CSPG-rich extracellular matrix in zebrafish spinal cord regeneration.

## Key findings

- Injured neurons show reversible changes in properties and synaptic input via glutamatergic signaling.
- Extracellular matrix reorganization with CSPG deposition initially restricts plasticity but later supports regeneration.
- Enzymatic CSPG degradation partially impairs long-term axonal regrowth and recovery.

## Abstract

Spinal cord injury (SCI) triggers complex cellular and extracellular responses that disrupt neuronal connectivity and hinder repair. While mammals have limited regenerative abilities, zebrafish achieve functional recovery through coordinated neuroprotection and plasticity. Here, we examined how structural and functional adaptations of damaged spinal neurons interact with extracellular matrix (ECM) dynamics during regeneration in adult zebrafish. We found that injured neurons undergo reversible changes in cellular properties and synaptic input, mediated mainly by glutamatergic signaling. These modifications coincide with a transient ECM reorganization marked by increased deposition of chondroitin sulfate proteoglycans (CSPGs). Enzymatic CSPG degradation paradoxically partially impaired long-term axonal regrowth and locomotor recovery. Thus, CSPG-rich ECM exerts a dual role: initially restricting plasticity but subsequently supporting structural stabilization and regeneration. Our findings highlight a temporally coordinated interplay between neuronal excitability, synaptic remodeling, and ECM reorganization as key determinants of spinal cord repair, offering mechanistic insights for enhancing nervous system regeneration.

Spinal cord healing in zebrafish depends on a perfectly timed interaction between neurons and their microenvironment.

## Linked entities

- **Diseases:** spinal cord injury (MONDO:0043797)
- **Species:** Danio rerio (taxon 7955)

## Full-text entities

- **Genes:** sv2 (synaptic vesicle glycoprotein 2) [NCBI Gene 570651] {aka id:ibd5037}, chata (choline O-acetyltransferase a) [NCBI Gene 100170938] {aka chat, unm_tk64}, rab1ab (RAB1A, member RAS oncogene family b) [NCBI Gene 368883] {aka RAB1B, RAS, fb53a02, oncogene, rab1a, si:zc101n13.3}, vsx2 (visual system homeobox 2) [NCBI Gene 796163] {aka Vsx-2, alx, chx10}, gria3b (glutamate receptor, ionotropic, AMPA 3b) [NCBI Gene 368416] {aka AMPA, GRIN3A, SI:zC231H1.1, glur3b, gria3, gria3.2}, fosab (Fos proto-oncogene, AP-1 transcription factor subunit b) [NCBI Gene 394198] {aka cb1065, fos, zgc:77885}, sv2a (synaptic vesicle glycoprotein 2A) [NCBI Gene 568033] {aka si:ch211-271d10.3}
- **Diseases:** fatigue (MESH:D005221), excitotoxic damage (MESH:D020263), neuronal dysfunction (MESH:D009461), SCI (MESH:D013119), trauma (MESH:D014947), neuronal damage (MESH:D009410), spinal injury (MESH:D013124), death (MESH:D003643), infection (MESH:D007239)
- **Chemicals:** acetylsalicylic acid (MESH:D001241), water (MESH:D014867), biotin (MESH:D001710), NB (MESH:D009556), CaCl2 (MESH:D002122), N-acetylgalactosamine (MESH:D000116), glutamate (MESH:D018698), NaCl (MESH:D012965), paraformaldehyde (MESH:C003043), sucrose (MESH:D013395), 2,3-dioxo-6-nitro-7-sulfamoyl-benzo [f]quinoxaline (MESH:C062865), glucose (MESH:D005947), MS-222 (MESH:C003636), sodium acetate (MESH:D019346), KCl (MESH:D011189), PBS (MESH:D007854), neurobiotin (MESH:C070614), tetramethylrhodamine-dextran (MESH:C067661), glycerol (MESH:D005990), Hepes (MESH:D006531), Alexa Fluor (-), PI (MESH:D011419), dextran (MESH:D003911), isopentane (MESH:C067038), carbohydrates (MESH:D002241), oil (MESH:D009821)
- **Species:** Proteus vulgaris (species) [taxon 585], Danio rerio (leopard danio, species) [taxon 7955], Wisteria floribunda (Japanese wistaria, species) [taxon 3922]

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12965314/full.md

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Source: https://tomesphere.com/paper/PMC12965314