# DNA Polymerase Gamma Acetylation Governs Mitochondrial Homeostasis and Vascular Cell Senescence

**Authors:** Pengbo Wang, Liming Yu, Kexin Cao, Xiaofan Guo, Lufan Sun, Shu Zhang, Tong Zhao, Yao Yu, Mengyao Xiong, Chang Liu, Naijin Zhang, Yingxian Sun, Guozhe Sun, Liu Cao

PMC · DOI: 10.7150/ijbs.122298 · 2026-02-04

## TL;DR

This study reveals how acetylation of DNA polymerase gamma affects mitochondrial function and aging in vascular cells.

## Contribution

The discovery of K1039 as a novel acetylation site in Polγ that regulates mitochondrial homeostasis and vascular cell senescence.

## Key findings

- Hyperacetylation of Polγ at K1039 disrupts mtDNA binding and causes mitochondrial dysfunction.
- D257A mutation reduces Sirt3-Polγ complex formation, leading to accelerated senescence.
- Polγ acetylation at K1039 acts as a molecular switch coordinating mtDNA homeostasis and aging.

## Abstract

DNA polymerase gamma (Polγ), the sole polymerase for mitochondrial DNA (mtDNA), emerges as a critical regulator of metabolism-associated senescence. While lysine acetylation represents a key post-translational modification (PTM) influencing mitochondrial function, its mechanistic role in Polγ-mediated vascular aging remains undefined. Through combinatorial approaches employing in vitro acetylation models and POLGD257A/D257A mice, a validated model of mitochondrial dysfunction and senescence, we identify Lys 1039 (K1039) as a novel acetylation site which was dynamically regulated during aging process. Both D257A mutation-driven hyper-acetylation of Polγ K1039 reduced human aortic smooth muscle cell (HASMC) contractility, triggering pathological hyperproliferation and mitochondrial dysfunction, collectively culminating in premature cellular senescence. Pathological stimulation or genetic manipulation inducing hyperacetylation at K1039 disrupts Polγ's binding capacity with mtDNA. This molecular deficiency manifested functionally as compromised contractile performance in HASMCs and accelerated senescence phenotypes. Based on the above foundation and POLGD257A/D257A mice model, we demonstrated that D257A mutation reduced Sirt3-Polγ complex formation constituted the pathologically relevant molecular pathway driving aberrant acetylation homeostasis and leading to the senescence. Our findings establish a previously unrecognized regulatory axis wherein Polγ acetylation status at K1039 serves as a molecular switch coordinating mtDNA homeostasis, HASMCs functionality, and senescence progression. This mechanism might explain the remarkably consistent phenotypic manifestations of Polγ-induced dysfunction across diverse tissues and aging models. This work provides fundamental insights into the epigenetic-metabolic crosstalk governing vascular aging processes, providing a unifying framework for age-related vascular pathologies.

## Linked entities

- **Genes:** POLG (DNA polymerase gamma, catalytic subunit) [NCBI Gene 5428], SIRT3 (sirtuin 3) [NCBI Gene 23410]
- **Proteins:** POLG (DNA polymerase gamma, catalytic subunit), SIRT3 (sirtuin 3)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Klhdc2 (kelch domain containing 2) [NCBI Gene 69554] {aka 2310022K15Rik, D12Ertd522e, HCLP-1, LCP}, Cox4i1 (cytochrome c oxidase subunit 4I1) [NCBI Gene 12857] {aka COX, COX IV-1, COXIV, Cox4, Cox4a, IV-1}, Cyp2b10 (cytochrome P450, family 2, subfamily b, polypeptide 10) [NCBI Gene 13088] {aka Cyp2b, Cyp2b20, p16}, Polg (polymerase (DNA directed), gamma) [NCBI Gene 18975] {aka PolgA}, Cdkn1a (cyclin dependent kinase inhibitor 1A) [NCBI Gene 12575] {aka CAP20, CDKI, CIP1, Cdkn1, P21, SDI1}, Myc (Myc proto-oncogene, bHLH transcription factor) [NCBI Gene 17869] {aka Myc2, Niard, Nird, bHLHe39}, Sirt3 (sirtuin 3) [NCBI Gene 64384] {aka 2310003L23Rik, Sir2l3}, Trp53-ps (transformation related protein 53, pseudogene) [NCBI Gene 22060], Trpc6 (transient receptor potential cation channel, subfamily C, member 6) [NCBI Gene 22068] {aka LLHWJM002, LLHWJM003, LLHWJM004, TRP-6, Trrp6, mtrp6}, Kat2a (K(lysine) acetyltransferase 2A) [NCBI Gene 14534] {aka 1110051E14Rik, Gcn5, Gcn5l2, mmGCN5}, POLG (DNA polymerase gamma, catalytic subunit) [NCBI Gene 5428] {aka MIRAS, MTDPS4A, MTDPS4B, PEO, POLG1, POLGA}, Pkm (pyruvate kinase, muscle) [NCBI Gene 18746] {aka Pk-2, Pk-3, Pk3, Pkm2}, Cs (citrate synthase) [NCBI Gene 12974] {aka 2610511A05Rik, 9030605P22Rik, Ahl4, Cis}, Gapdh (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 14433] {aka Gapd}
- **Diseases:** age (MESH:D019588), diabetes (MESH:D003920), Polgamma deficiency (OMIM:615607), cardiovascular pathologies (MESH:D002318), neurotoxic (MESH:D020258), mitochondrial failure (MESH:D051437), Mitochondrial dysfunction (MESH:D028361), ataxia (MESH:D001259), mitochondrial collapse (MESH:D001261), POLG deficiency (OMIM:613662), vascular calcification (MESH:D061205), mitochondrial defects (MESH:C565376), PEO (MESH:D017246), neuropathies (MESH:D009422), HASMC (MESH:D018235), AHS (MESH:D002549), spinal deformities (MESH:D013122), diabetic vascular injury (MESH:D003925), peripheral neuropathy (MESH:D010523), myopathies (MESH:D009135), vascular pathologies (MESH:D005598), alopecia (MESH:D000505)
- **Chemicals:** streptomycin (MESH:D013307), vitamin D3 (MESH:D002762), EDTA (MESH:D004492), Lipofectamine 2000 (MESH:C086724), corn oil (MESH:D003314), penicillin (MESH:D010406), SA (MESH:D000077145), crystal violet (MESH:D005840), methanol (MESH:D000432), -fat (MESH:D005223), Acetylated-lysine (-), NaOH (MESH:D012972), DAPI (MESH:C007293), formaldehyde (MESH:D005557), SDS (MESH:D012967), PVDF (MESH:C024865), PBS (MESH:D007854), STZ (MESH:D013311), agarose (MESH:D012685), TSA (MESH:C012589), paraformaldehyde (MESH:C003043), CO2 (MESH:D002245), nicotinamide (MESH:D009536), water (MESH:D014867), ATP (MESH:D000255)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** D257A, D257A, K1039Q, W748S, Glycine for 5, (F) for 4, D257, H248Y, K1039R, K1039, K1039K
- **Cell lines:** HEK293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), -1 — Mus musculus (Mouse), Hybridoma (CVCL_C7RB), Sh — Homo sapiens (Human), Amelanotic melanoma, Cancer cell line (CVCL_1E45), MEFs — Mus musculus (Mouse), Finite cell line (CVCL_9115), HASMC — Homo sapiens (Human), Finite cell line (CVCL_4009)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12965149/full.md

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Source: https://tomesphere.com/paper/PMC12965149