# Impact of Fire and Heat Stress on Soil Microorganisms: A Review of Community Changes, Molecular Responses and Plant‐Beneficial Roles

**Authors:** Ma. del Carmen Orozco‐Mosqueda, Aurora Flores‐Piña, Ajay Kumar, Fannie I. Parra‐Cota, Sergio de los Santos‐Villalobos, Debasis Mitra, Olubukola Oluranti Babalola, Gustavo Santoyo

PMC · DOI: 10.1111/1758-2229.70247 · Environmental Microbiology Reports · 2026-03-05

## TL;DR

This paper reviews how fire affects soil microbes, changing their communities and roles in ways that can impact plant health and agriculture.

## Contribution

The paper provides a comprehensive review of microbial resilience and functional shifts in soil due to fire and heat stress.

## Key findings

- Fires increase abundance of Firmicutes and Actinobacteria while reducing less resilient microbes.
- Fungi like Ascomycota aid in post-fire recovery and support plant regrowth through enhanced nutrient availability.
- Fire impacts microbial metabolic activity and nutrient cycling, influencing agroecosystem health.

## Abstract

Fire, whether occurring on the surface or underground, significantly influences soil microbial dynamics by reshaping community composition, functional diversity and overall soil and plant health. This review examines the effects of fire on soil‐beneficial microbial communities, with particular attention to how surface and underground fires drive shifts in microbial diversity and functional roles within the agroecosystems. These changes impact key processes such as nutrient cycling, soil physicochemical structure and organic matter decomposition, ultimately affecting crop production. Bacterial groups such as Firmicutes and Actinobacteria often increase in abundance following fire events, while others lacking survival strategies tend to decline. Resilient fungal groups, including Ascomycota (such as Aspergillus, Penicillium and Trichoderma), frequently play pivotal roles during the recovery process. Fire can also enhance microbial metabolic activity, particularly in pathways involved in organic matter degradation, leading to short‐term increases in nutrient availability that support plant regrowth. Finally, the review discusses the molecular responses of microbes to fire and outlines perspectives for better understanding this type of stress and how it affects the beneficial soil microbiota in agricultural edaphic systems.

This work reviewed the direct and indirect effects of fires on microbial communities and the resilience strategies microbes use to withstand high temperatures .

## Linked entities

- **Species:** Ascomycota (taxon 4890), Aspergillus (taxon 5052), Penicillium (taxon 5073), Trichoderma (taxon 5543)

## Full-text entities

- **Genes:** HSPA4 (heat shock protein family A (Hsp70) member 4) [NCBI Gene 3308] {aka APG-2, HEL-S-5a, HS24/P52, HSPH2, RY, hsp70}, HSP90AA1 (heat shock protein 90 alpha family class A member 1) [NCBI Gene 3320] {aka EL52, HEL-S-65p, HSP86, HSP89A, HSP90A, HSP90N}
- **Diseases:** burn (MESH:D002056), Fire (MESH:D000092422)
- **Chemicals:** oxygen (MESH:D010100), ammonia (MESH:D000641), glycerophospholipids (MESH:D020404), phosphorus (MESH:D010758), N (MESH:D009584), methane (MESH:D008697), ammonium (MESH:D064751), C (MESH:D002244), chitin (MESH:D002686), CL (MESH:D002308), water (MESH:D014867), phospholipids (MESH:D010743), PG (MESH:D010715), colanic acid (MESH:C004275), PE (MESH:C483858), sulphur (MESH:D013455), PLFA (-), potassium (MESH:D011188), mercury (MESH:D008628), unsaturated fatty acids (MESH:D005231), nitrite (MESH:D009573), CO2 (MESH:D002245), lignin (MESH:D008031), lipid (MESH:D008055), biochar (MESH:C540010), cellulose (MESH:D002482), G + C (MESH:C057580), calcium (MESH:D002118), heavy metals (MESH:D019216)
- **Species:** Flavobacterium johnsoniae (species) [taxon 986], Rhizophagus irregularis (species) [taxon 588596], Clostridium pasteurianum (species) [taxon 1501], Bacillus subtilis (species) [taxon 1423], Scytonema javanicum (species) [taxon 1170706], Heteromita globosa (species) [taxon 45107], Agaricus bisporus (common mushroom, species) [taxon 5341], Escherichia coli (E. coli, species) [taxon 562], Laccaria bicolor (species) [taxon 29883], Nitrososphaera viennensis (species) [taxon 1034015], Aspergillus niger (species) [taxon 5061], Deinococcota (phylum) [taxon 1297], Penicillium chrysogenum (species) [taxon 5076], Chitinophaga pinensis (species) [taxon 79329], Pseudomonas syringae (species) [taxon 317], Trichoderma harzianum (species) [taxon 5544], Streptomyces coelicolor (species) [taxon 1902], Halobacterium salinarum (species) [taxon 2242], Cyanobacteriota (blue-green algae, phylum) [taxon 1117], Acidobacterium capsulatum (species) [taxon 33075], Methanobacteriales (order) [taxon 2158], Phormidium ambiguum (species) [taxon 71191], Pseudomonadota (proteobacteria, phylum) [taxon 1224], Chaetomium (genus) [taxon 5149], Ganoderma lucidum (species) [taxon 5315], Alveolata (alveolates, clade) [taxon 33630], Hypoxylon (genus) [taxon 42308], Actinomycetota (actinobacteria, phylum) [taxon 201174], Acanthamoeba castellanii (species) [taxon 5755], Pectobacterium carotovorum (species) [taxon 554], Penicillium (genus) [taxon 5073], Xylaria (genus) [taxon 37991], Linnemannia elongata (species) [taxon 310910], Powellomyces sp. EA (species) [taxon 252690], Microcoleus vaginatus (species) [taxon 119532], Terriglobia (class) [taxon 204432], Pseudomonas fluorescens (species) [taxon 294], Vermamoeba vermiformis (species) [taxon 5778], Methanosarcina barkeri (species) [taxon 2208], Burkholderiales (order) [taxon 80840], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Methanomicrobiales (order) [taxon 2191], Methanosarcinales (order) [taxon 94695], Amoebozoa (amoebozoans, clade) [taxon 554915], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Ascomycota (ascomycete fungi, phylum) [taxon 4890], Methanocellales (order) [taxon 570264], Homo sapiens (human, species) [taxon 9606], Trichoderma (genus) [taxon 5543], Candidatus Solibacter usitatus (species) [taxon 332163], Pinus koraiensis (channamu, species) [taxon 88728], Mucor circinelloides (species) [taxon 36080], Bacillota (clostridial firmicutes, phylum) [taxon 1239], Nitrosopumilus (genus) [taxon 338191], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Nostoc commune (species) [taxon 1178], Ammonia (genus) [taxon 29189], Haloferax volcanii (species) [taxon 2246], Methanobacterium formicicum (species) [taxon 2162], Bacillus (genus) [taxon 55087]

## Full text

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## References

106 references — full list in the complete paper: https://tomesphere.com/paper/PMC12963670/full.md

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Source: https://tomesphere.com/paper/PMC12963670