# Mapping Intestinal Paracellular Perm Eability in Mice: Regional and Cellular Variability Under Physiological and Stimulated Conditions

**Authors:** Mathilde Miquel, Kadirey Verwaerde, Anissa Edir‐Kibri, Mikael Albin, Florence Blas‐Y‐Estrada, Audrey Samper, Elodie Rousseau‐Bacquie, Hervé Robert, Hélène Eutamène, Vassilia Théodorou, Christine Coméra

PMC · DOI: 10.1096/fba.2025-00325 · FASEB BioAdvances · 2026-03-05

## TL;DR

This study maps how substances pass through the intestinal walls in mice under normal and stressed conditions, revealing cell-specific permeability patterns.

## Contribution

A new method using fluorescent dyes and confocal microscopy was developed to detect paracellular permeability in mouse intestines.

## Key findings

- FM dye selectively labels specific intestinal cell types like Goblet cells and enteroendocrine cells.
- Chronic stress increases paracellular permeability in the colon, detectable with FM staining.
- Lipid-rich diets increase permeability around jejunal enterocytes.

## Abstract

Intestinal paracellular permeability was analyzed ex vivo by incubation of tissue segments at 0°C with the fluorescent dyes FM1‐43FX (FM) or TRITC‐dextran 3 kDa lysine‐fixable (TD3L) and confocal microscopy in (i) healthy mice and (ii) mice submitted to chronic stress or lipid diets. In the small intestine of healthy mice, FM staining was restricted to the apical surface of enterocytes but fully penetrated around Goblet cells, enteroendocrine cells, tuft cells, and apoptotic cells. The same cell types were similarly labeled in the colon when located on the tissue surface but not within the crypts. TD3L exhibited a comparable labeling pattern but also showed moderate staining of the basolateral surface of enterocytes at the tips of small intestinal villi, and also substantial penetration around colonic epithelial cells at the surface or top of crypts. The study reveals patterns of permeability likely corresponding to the “leak” pathway of paracellular transport through the intestinal epithelium, because transcellular endocytosis is blocked at 0°C. This pathway is found around specific cell populations involved in the luminal detection of food, antigens, microbes, or their secretions. These trigger immune, neural, and tissue responses that maintain intestinal homeostasis. Chronic stress induced by glucocorticoid exposure increased FITC‐dextran 4 kDa permeability in vivo. Using FM, increased paracellular permeability was also detected ex vivo and selectively localized in the colon of stressed mice. A single oral administration of a lipid‐rich food also increased ex vivo permeability around jejunal enterocytes. Pathophysiological increases in paracellular permeability are therefore detectable using the FM methodology.

This study analyzed the paracellular permeability of the intestines of healthy mice at a basal level. A new detection method involving tissue incubation for 5 min with luminal fluorescent dyes, such as FM1‐43FX (FM), which bind to accessible plasma (or external) cell membranes, was developed. Using confocal microscopy, we identified certain epithelial cells, such as goblet cells, as being naturally permeable to FM, while others were impermeable. This selective passage may belong to the leak intestinal paracellular pathway.

## Linked entities

- **Chemicals:** FM1-43FX (PubChem CID 168679810)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Dcx (doublecortin) [NCBI Gene 13193] {aka Dbct}, Casp3 (caspase 3) [NCBI Gene 12367] {aka A830040C14Rik, AC-3, CASP-3, CC3, CPP-32, CPP32}, Ocln (occludin) [NCBI Gene 18260] {aka Ocl}, Cldn4 (claudin 4) [NCBI Gene 304407], Chga (chromogranin A) [NCBI Gene 12652] {aka ChrA, cgA}, Hp (haptoglobin) [NCBI Gene 15439] {aka HP-1, preHP2}, Dclk1 (doublecortin-like kinase 1) [NCBI Gene 13175] {aka 1700113D08Rik, 2810480F11Rik, Click-I, Cpg16, Dcamkl1, Dcl}, Muc2 (mucin 2) [NCBI Gene 17831] {aka 2010015E03Rik, MCM, wnn}, Rasa1 (RAS p21 protein activator 1) [NCBI Gene 218397] {aka Gap, RasGAP, Rasa}
- **Diseases:** dysbiosis (MESH:D064806), weight gain (MESH:D015430), TD3L (MESH:D020167), digestive and extra-digestive diseases (MESH:D004066), dislocation (MESH:D004204)
- **Chemicals:** Triton X100 (MESH:D017830), corticosterone (MESH:D003345), cortisone (MESH:D003348), FITC (MESH:D016650), nitrogen (MESH:D009584), beta-cyclodextrin (MESH:C031215), P (MESH:D010758), sugar (MESH:D000073893), carbamylcholine chloride (MESH:D002217), Fat (MESH:D005223), NaCl (MESH:D012965), FITC-dextran (MESH:C015219), palm oil (MESH:D000073878), lactulose (MESH:D007792), atropine (MESH:D001285), water (MESH:D014867), lanthanum (MESH:D007811), phospholipid (MESH:D010743), luminal (MESH:D010634), oil (MESH:D009821), carbohydrates (MESH:D002241), cyclodextrin (MESH:D003505), amino acid (MESH:D000596), olive oil (MESH:D000069463), CORT (-), dextran (MESH:D003911), 4-6 diamino-2-phenylindole (MESH:C000607851), DAPI (MESH:C007293), barium (MESH:D001464), ice (MESH:D007053), Tween-20 (MESH:D011136), lysine (MESH:D008239), heparin (MESH:D006493), cellulose (MESH:D002482), sucrose (MESH:D013395), paraformaldehyde (MESH:C003043), Lipid (MESH:D008055), palmitic acid (MESH:D019308), LPS (MESH:D008070), TRITC (MESH:C009434), mannitol (MESH:D008353), TiO2 (MESH:C009495)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Olea europaea (common olive, species) [taxon 4146], Rodentia (rodent, order) [taxon 9989], Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116], Listeria monocytogenes (species) [taxon 1639]
- **Cell lines:** Caco-2 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0025)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12963463/full.md

## References

50 references — full list in the complete paper: https://tomesphere.com/paper/PMC12963463/full.md

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Source: https://tomesphere.com/paper/PMC12963463