# Hydrostatic pressure-enabled transformation in Natronomonas pharaonis: breaking barriers in haloalkaliphilic Archaea genetics

**Authors:** Emma Bonnaud, Philippe M. Oger, Mathieu Orzalesi, Yoann Louis

PMC · DOI: 10.3389/fmicb.2026.1774663 · Frontiers in Microbiology · 2026-02-20

## TL;DR

A new, faster, and more efficient method for transforming Natronomonas pharaonis uses hydrostatic pressure to improve genetic manipulation in haloalkaliphilic Archaea.

## Contribution

A novel hydrostatic pressure-based transformation method for haloalkaliphilic Archaea is introduced, significantly improving efficiency and speed.

## Key findings

- Applying 35 MPa hydrostatic pressure with 1 M NaCl increases transformation efficiency 6.5-fold.
- The new method reduces transformation time by 17 days compared to PEG-mediated methods.
- The technique is promising for genetic manipulation of other difficult-to-transform haloalkaliphilic Archaea.

## Abstract

Haloalkaliphilic Archaea that thrive in hypersaline and hyperalkaline environments represent valuable models for fundamental research as well as promising resources for biotechnological applications. However, fully exploiting their potential is hindered by the difficulty of their genetic manipulation, due to the limited availability of genetic tools and the use of a transformation protocol that remain slow and weakly efficient. This limits both industrial exploitation and the study of these organisms. In this study, we describe the development of a new, faster, and more efficient transformation method. It relies on the application of hydrostatic pressure, followed by a rapid return to atmospheric pressure, which generates transient pores in the cell membrane, facilitating the uptake of exogenous DNA. The results demonstrate that applying a pressure of 35 MPa in the presence of 1 M NaCl allows the rapid and efficient generation of transformants in Natronomonas pharaonis. This protocol enhances transformation efficiency 6.5-fold while cutting the time required to obtain transformants by 17 days, in contrast to Polyethylene Glycol (PEG)-mediated spheroplast transformation. This new transformation method greatly facilitates the genetic manipulation of Nmn. pharaonis (and surely other haloalkaliphilic Archaea that are difficult to transform), thereby opening up new industrial and research applications.

## Linked entities

- **Chemicals:** Polyethylene Glycol (PubChem CID 9033), NaCl (PubChem CID 5234)
- **Species:** Natronomonas pharaonis (taxon 2257)

## Full-text entities

- **Genes:** MRR [NCBI Gene 13906564], Dcm [NCBI Gene 7872371]
- **Chemicals:** novobiocin (MESH:D009675), lipid (MESH:D008055), sucrose (MESH:D013395), ampicillin (MESH:D000667), bacitracin (MESH:D001414), KCl (MESH:D011189), betaine (MESH:D001622), DSM 2160 (-), water (MESH:D014867), HCl (MESH:D006851), PMPa (MESH:D000068698), salt (MESH:D012492), pRo (MESH:D011392), NaCl (MESH:D012965), agar (MESH:D000362), casamino acid (MESH:C017721), EDTA (MESH:D004492), PEG (MESH:D011092)
- **Species:** Halobacterium salinarum NRC-1 (no rank) [taxon 64091], Haloferax volcanii (species) [taxon 2246], Natrialba magadii (species) [taxon 13769], Natronomonas pharaonis (species) [taxon 2257], Escherichia coli (E. coli, species) [taxon 562], Schizosaccharomyces pombe (fission yeast, species) [taxon 4896]
- **Cell lines:** GM48 — Homo sapiens (Human), 46,XY sex reversal 1, Finite cell line (CVCL_H952), coli DH5alpha — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531)

## Full text

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## Figures

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## References

28 references — full list in the complete paper: https://tomesphere.com/paper/PMC12963326/full.md

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Source: https://tomesphere.com/paper/PMC12963326