# Frontiers in fungal phosphatases: molecular diversity, regulatory mechanisms, analytical methodologies, ecological significance, and prospects for sustainable utilization

**Authors:** Samiyah Saeed Al-Zahrani

PMC · DOI: 10.3389/fbioe.2026.1735288 · Frontiers in Bioengineering and Biotechnology · 2026-02-20

## TL;DR

This review explores fungal phosphatases, their roles in phosphorus cycling, regulation, and potential for sustainable agriculture and environmental management.

## Contribution

The paper provides a comprehensive review and bibliometric analysis of fungal phosphatases, highlighting their ecological and biotechnological significance.

## Key findings

- Fungal phosphatases are crucial for phosphorus mobilization and soil nutrient cycling.
- Regulatory mechanisms include PHO/PHR pathways, TOR signaling, and post-translational modifications.
- Current analytical methods include colorimetric, fluorometric, and omics-based approaches.

## Abstract

Phosphorus is an indispensable macronutrient essential for all forms of life, as it plays a central role in cellular energy metabolism, nucleic acid synthesis, and structural integrity. Since organisms can only absorb dissolved inorganic phosphate, the phosphatase enzyme is important in the process of converting organic phosphorus into forms that are bioavailable. Fungal phosphatases are a vastly diverse and heterogeneous functional and structural category that catalyzes the liberation of phosphates in a wide variety of organic compounds and facilitates the mobilization of phosphorus in the soil and symbiotic interactions. This review summarizes the existing information on fungal phosphatases, their classification, molecular regulation, methods of their analysis, ecological significance, and biotechnological use. Bibliometric analysis has been conducted using 3,944 publications published between 1944 and June-2025, and the analysis rate has shown an increase of 7.11% which indicates the rising relevance of the research. Phosphate-sensitive transcriptional networks (PHO/PHR pathways), nutrient signaling (TOR), MAPK cascades, and post-translational modifications control their activity. Analytical methods have either the traditional colorimetric assays or fluorometric and omics-based ones, such as transcriptomics and proteomics. These enzymes mediate organic phosphorus mineralization, symbiotic nutrient exchange in mycorrhizal systems, saprotrophic decomposition, and global phosphorus cycling, which are ecologically relevant. Its uses would be in biofertilizers, soil nutrient management, recovery of phosphorus in waste, industrial bioprocesses, and climate-smart agriculture. Nevertheless, a number of gaps exist in terms of the phosphatase diversity in non-model fungi, complexity of regulatory networks, and methodological sophistication. To promote sustainable phosphorus management, the combination of molecular, ecological and applied viewpoints is a requirement, especially due to the global exhaustion of phosphorus resources and the necessity of environmental sustainability.

## Full-text entities

- **Genes:** PPQ1 (protein-serine/threonine phosphatase) [NCBI Gene 855923] {aka SAL6}, OCA6 (protein-tyrosine-phosphatase) [NCBI Gene 851639], PPH21 (phosphoprotein phosphatase 2A catalytic subunit PPH21) [NCBI Gene 851421], RTS1 (protein phosphatase 2A regulatory subunit RTS1) [NCBI Gene 854179] {aka SCS1}, HOG1 (mitogen-activated protein kinase HOG1) [NCBI Gene 850803] {aka SSK3}, TAP42 (Tap42p) [NCBI Gene 855043], CDC55 (protein phosphatase 2A regulatory subunit CDC55) [NCBI Gene 852685] {aka TMR4}, PTC1 (type 2C protein phosphatase PTC1) [NCBI Gene 851558] {aka CWH47, KCS2, TPD1}, SSU72 (RNA polymerase II subunit A C-terminal domain phosphatase) [NCBI Gene 855499], MSG5 (tyrosine/serine/threonine protein phosphatase MSG5) [NCBI Gene 855674], GLC7 (type 1 serine/threonine-protein phosphatase catalytic subunit GLC7) [NCBI Gene 856870] {aka CID1, DIS2}, SDP1 (mitogen-activated protein kinase tyrosine protein phosphatase SDP1) [NCBI Gene 854693], PTP3 (tyrosine protein phosphatase PTP3) [NCBI Gene 856807], MYCBP2 (MYC binding protein 2) [NCBI Gene 23077] {aka Myc-bp2, PAM, PHR1, Phr}, MIH1 (putative tyrosine protein phosphatase MIH1) [NCBI Gene 855052], TPD3 (protein phosphatase 2A structural subunit TPD3) [NCBI Gene 851217] {aka FUN32}, SLT2 (mitogen-activated serine/threonine-protein kinase SLT2) [NCBI Gene 856425] {aka BYC2, LYT2, MPK1, SLK2}, PTP2 (tyrosine protein phosphatase PTP2) [NCBI Gene 854383], PPH22 (phosphoprotein phosphatase 2A catalytic subunit PPH22) [NCBI Gene 851339] {aka PPH2}
- **Diseases:** infection (MESH:D007239), fungal (MESH:D009181), PTC (MESH:D000077273)
- **Chemicals:** FK520 (MESH:C058028), phosphotyrosine (MESH:D019000), fluorescein (MESH:D019793), 4-methylumbelliferyl phosphate (MESH:C005359), amino-acid (MESH:D000596), nitrogen (MESH:D009584), aluminum phosphates (MESH:C012714), ester (MESH:D004952), Ser (MESH:D012694), hydroxyapatite (MESH:D017886), rapamycin (MESH:D020123), carbon (MESH:D002244), polymer (MESH:D011108), phosphothreonine (MESH:D010769), metal (MESH:D008670), ELFP (-), organophosphates (MESH:D010755), ELF-97 (MESH:C079177), phytate (MESH:D010833), aluminium (MESH:D000535), glycerophosphocholine (MESH:D005997), acids (MESH:D000143), inositol phosphates (MESH:D007295), FK506 (MESH:D016559), sugars (MESH:D000073893), humic acids (MESH:D006812), P (MESH:D010758), Pi (MESH:D010716), Phosphate (MESH:D010710), zinc (MESH:D015032), Glycerol (MESH:D005990), CsA (MESH:D016572), cyclic nucleotides (MESH:D009712), alcohol (MESH:D000438), p-nitrophenyl phosphate (MESH:C008644), glucose (MESH:D005947), polyphosphate (MESH:D011122), manganese (MESH:D008345), bis-pNPP (MESH:C002887), magnesium (MESH:D008274), Thr (MESH:D013912), Ca- (MESH:D002118), 4-methylumbelliferone (MESH:D006923), phosphoserine (MESH:D010768), tricalcium phosphate (MESH:C018392), phospholipids (MESH:D010743), tyrosine (MESH:D014443), GPI (MESH:D017261), lipids (MESH:D008055), iron (MESH:D007501), aflatoxin (MESH:D000348)
- **Species:** Aspergillus niger (species) [taxon 5061], Pyricularia oryzae (rice blast fungus, species) [taxon 318829], Trichoderma (genus) [taxon 5543], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Aspergillus fumigatus (species) [taxon 746128], Candida albicans (species) [taxon 5476], Escherichia coli (E. coli, species) [taxon 562], Penicillium sp. (species) [taxon 5081], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Aspergillus flavus (species) [taxon 5059], Mortierella (genus) [taxon 4855], Pinus massoniana (Chinese red pine, species) [taxon 88730], Allium cepa (onion, species) [taxon 4679], Hymenoscyphus ericae [taxon 1745343], Pinus subgen. Pinus (diploxylon pines, subgenus) [taxon 139271], Fungi (kingdom) [taxon 4751], Thermothelomyces thermophilus (species) [taxon 78579], Komagataella pastoris (species) [taxon 4922], Cephalosporium (genus) [taxon 81097], Cryptococcus neoformans (Cryptococcus neoformans serotype A, species) [taxon 5207]
- **Cell lines:** ELF-97 — Homo sapiens (Human), Embryonic stem cell (CVCL_C115)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12963243/full.md

## References

163 references — full list in the complete paper: https://tomesphere.com/paper/PMC12963243/full.md

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Source: https://tomesphere.com/paper/PMC12963243