# Multi-omics analysis reveals the mechanism of verbenalin in treating gout via modulating purine metabolism, gut microbiota, and inflammatory pathways

**Authors:** Yan Xiao, Ting Zhang, Qianglong Chen, Yiqian Zhang, Bingyan Chen, Meiling Wang, Yingjie Zhang, Mingqing Huang, Youxin Su, Jiemei Guo

PMC · DOI: 10.3389/fimmu.2026.1761558 · Frontiers in Immunology · 2026-02-20

## TL;DR

Verbenalin, a natural compound, may treat gout by reducing uric acid, inflammation, and gut microbiota imbalance in rats.

## Contribution

This study is the first to reveal verbenalin's multi-target anti-gout mechanisms using a multi-omics approach in a rat model.

## Key findings

- Verbenalin reduced joint inflammation, uric acid levels, and improved gait and kidney/liver function in gouty rats.
- It suppressed inflammatory pathways (PI3K-AKT, MAPK) and modulated gut microbiota and purine metabolism.
- Histopathological damage in joints, kidneys, and liver was significantly reduced by verbenalin treatment.

## Abstract

Gout is a prevalent metabolic disorder characterized by hyperuricemia and inflammation. Verbenalin, an iridoid glycoside from Verbena officinalis, possesses anti-inflammatory properties; however, its therapeutic potential and underlying mechanisms in gout remain underexplored.

This study aimed to evaluate the pharmacological effects and elucidate the molecular mechanisms of verbenalin in a rat model of gout.

Hyperuricemia and acute gouty arthritis were induced in rats using potassium oxonate/hypoxanthine and monosodium urate, respectively. Verbenalin was administered orally for 7 days. Therapeutic efficacy was assessed via physical symptom scores (inflammation, gait, swelling), renal/hepatic function indices, and histopathology. Furthermore, a multi-omics strategy integrating transcriptomics, metagenomics, and metabolomics, combined with Western blotting, was employed to investigate the pharmacological mechanisms.

Verbenalin treatment significantly alleviated joint inflammation and swelling while improving gait scores. It effectively lowered serum uric acid (UA), creatinine, and BUN levels, inhibited hepatic xanthine oxidase (XOD) activity, and promoted urinary UA excretion. Histopathological damage in the joints, kidneys, and liver was markedly mitigated. Mechanistically, verbenalin downregulated the expression of urate transporters (URAT1, GLUT9) and inflammatory mediators (NLRP3, IL-1β) by inhibiting the PI3K-AKT and MAPK signaling pathways. Multi-omics analysis further revealed that verbenalin restored gut microbiota diversity and modulated purine metabolism, correlating with reduced UA levels.

These findings demonstrate that verbenalin may exert anti-gout effects through the potential synergy of modulating purine metabolism, shifting gut microbiota composition, and suppressing PI3K-AKT and MAPK inflammatory signaling pathways. This study provides a preliminary scientific basis for further investigation into verbenalin as a prospective multi-target therapeutic candidate.

Verbenalin exerts anti-gout effects by synergistically modulating purine metabolism, restoring gut microbiota balance, and suppressing inflammatory signaling (PI3K-AKT, MAPK).Infographic illustrating gout rat modeling using hypoxanthine, potassium oxonate, and MSU, with effects on gut microbiota disorder and downstream liver and kidney inflammation via MAPK and PI3K/AKT pathways, modulated by verbenalin inhibition.

Verbenalin exerts anti-gout effects by synergistically modulating purine metabolism, restoring gut microbiota balance, and suppressing inflammatory signaling (PI3K-AKT, MAPK).

## Linked entities

- **Genes:** SLC22A12 (solute carrier family 22 member 12) [NCBI Gene 116085], SLC2A6 (solute carrier family 2 member 6) [NCBI Gene 11182], NLRP3 (NLR family pyrin domain containing 3) [NCBI Gene 114548], IL1B (interleukin 1 beta) [NCBI Gene 3553], MAPK (mitogen activated kinase-like protein) [NCBI Gene 7446652]
- **Chemicals:** verbenalin (PubChem CID 73467), potassium oxonate (PubChem CID 2723920), hypoxanthine (PubChem CID 135398638), monosodium urate (PubChem CID 23690430), creatinine (PubChem CID 588), BUN (PubChem CID 91971254)
- **Diseases:** gout (MONDO:0005393)
- **Species:** Rattus norvegicus (taxon 10116)

## Full-text entities

- **Genes:** Nlrp3 (NLR family, pyrin domain containing 3) [NCBI Gene 287362] {aka Cias1}, Tnf (tumor necrosis factor) [NCBI Gene 24835] {aka RATTNF, TNF-alpha, Tnfa}, Il1b (interleukin 1 beta) [NCBI Gene 24494] {aka IL-1F2}, Pik3cb (phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta) [NCBI Gene 85243], Gda (guanine deaminase) [NCBI Gene 83585] {aka Cypin}, Il6 (interleukin 6) [NCBI Gene 24498] {aka ILg6, Ifnb2}, Bax (BCL2 associated X, apoptosis regulator) [NCBI Gene 24887], Akt1 (AKT serine/threonine kinase 1) [NCBI Gene 24185] {aka Akt}, Actb (actin, beta) [NCBI Gene 81822] {aka Actx}, Got2 (glutamic-oxaloacetic transaminase 2) [NCBI Gene 25721] {aka ASPATA, mAAT}, Vip (vasoactive intestinal peptide) [NCBI Gene 117064] {aka vip/phi27}, Casp3 (caspase 3) [NCBI Gene 25402] {aka CPP32-beta, Lice, Yama}, Bcl2 (BCL2, apoptosis regulator) [NCBI Gene 24224] {aka Bcl-2}
- **Diseases:** hepatic/renal impairment (MESH:D008107), hepatic inflammation (MESH:D007249), neurodegenerative disorders (MESH:D019636), diseases (MESH:D004194), Gout (MESH:D006073), GA (MESH:C536833), cancer (MESH:D009369), Dysbiosis (MESH:D064806), hypersensitivity syndrome (MESH:D063926), locomotor impairment (MESH:D001523), dysplasia of the renal capsule (MESH:D002062), swelling (MESH:D004487), acute gouty arthritis (MESH:D015210), acute lung injury (MESH:D055371), ankle and foot edema (MESH:D016512), NET (MESH:C536657), MOD (MESH:D004195), Purine metabolism disorder (MESH:D011686), white lesion (MESH:D014912), metabolic abnormality (MESH:D008659), renal (MESH:D006030), renal tubular vacuolar degeneration (MESH:C536522), histopathological damage (MESH:D020263), arthritis (MESH:D001168), atherosclerosis (MESH:D050197), foot swelling (MESH:D005530), gastrointestinal adverse reactions (MESH:D005767), lesions of the kidneys and liver tissue (MESH:D059226), joint swelling (MESH:D007592), herpes simplex virus infection (MESH:D006561), kidney damage (MESH:D007674), hyperuric acid (MESH:D011015), organ damage (MESH:D000092124), spleen deficiency (MESH:D013160), Liver and kidney injury (MESH:D017093), hepatic injury (MESH:D056486), MSU (MESH:C562377), erythema (MESH:D004890), synovial hyperplasia (MESH:D006965), HUA (MESH:D033461)
- **Chemicals:** trans-3-Indoleacrylic acid (MESH:C001446), methanol (MESH:D000432), Hypoxanthine (MESH:D019271), allopurinol (MESH:D000493), formic acid (MESH:C030544), MSU (MESH:D014527), Maltotetraose (MESH:C009819), Potassium oxonate (MESH:C489337), xylene (MESH:D014992), pentobarbital sodium (MESH:D010424), guanine (MESH:D006147), BEN (MESH:C492379), adenine nucleotide (MESH:D000227), water (MESH:D014867), purines (MESH:D011687), TRIzol (MESH:C411644), PO (MESH:D011059), SDS (MESH:D012967), colchicine (MESH:D003078), xanthine (MESH:D019820), ethanol (MESH:D000431), iridoid glycoside (MESH:D057889), H&amp;E (MESH:D006371), febuxostat (MESH:D000069465), EP (-), Hematoxylin (MESH:D006416), Maltotriose (MESH:C008317), guanine nucleotide (MESH:D006150), Aloesin (MESH:C069868), purine nucleotide (MESH:D011685), Butyric acid (MESH:D020148), AMP (MESH:D000249), purine (MESH:C030985), lipid (MESH:D008055), paraformaldehyde (MESH:C003043), urea nitrogen (MESH:C530477), GMP (MESH:C066524), PVDF (MESH:C024865), PBS (MESH:D007854), Verbenalin (MESH:C000511), eosin (MESH:D004801), benzbromarone (MESH:D001553), SCFAs (MESH:D005232), creatinine (MESH:D003404), purine nucleosides (MESH:D011684)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Mediterraneibacter (genus) [taxon 2316020], Streptococcus (genus) [taxon 1301], Rattus norvegicus (brown rat, species) [taxon 10116], Homo sapiens (human, species) [taxon 9606], Duncaniella (genus) [taxon 2518495], Blautia (genus) [taxon 572511], Verbena officinalis (common verbena, species) [taxon 79772]
- **Mutations:** rs16890979

## Full text

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## References

53 references — full list in the complete paper: https://tomesphere.com/paper/PMC12963231/full.md

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Source: https://tomesphere.com/paper/PMC12963231