# Microbial Life Inside Posidonia Seeds: Beneficial Endophytes and Implications for Marine Plant Health

**Authors:** Dalila Crucitti, Alberto Sutera, Francesco Carimi, Stefano Barone, Francesca La Bella, Fabio Badalamenti, Roberto De Michele, Davide Pacifico

PMC · DOI: 10.1002/mbo3.70259 · 2026-03-05

## TL;DR

This study identifies beneficial microbes in Posidonia oceanica seeds that may help marine plants grow and survive, offering potential for conservation and restoration.

## Contribution

The first evidence of culturable bacterial and fungal endophytes in Posidonia oceanica seeds, including potential vertical transmission of nitrogen-fixing microbes.

## Key findings

- Posidonia oceanica seeds host diverse bacterial and fungal endophytes with plant-growth-promoting traits.
- The presence of Candidatus Celerinatantimonas neptuna suggests possible vertical transmission of microbes from parent plants to seeds.

## Abstract

Plant–microbe interactions are key drivers of plant health and ecosystem functioning, yet their roles in marine environments remain poorly understood. The seagrass Posidonia oceanica, a foundation species in the Mediterranean Sea, forms complex associations with microbial communities that influence its development and stress tolerance. Here, we provide the first evidence of culturable bacterial and fungal endophytes inhabiting P. oceanica seeds collected from the central Mediterranean, a region representing a major center of the species' genetic diversity. Using two different marine culture media, we isolated a diverse assemblage of endophytes, predominantly affiliated with Marinomonas, Celerinatantimonas, Vibrio, Halomonas, Kocuria, Bacillus, Metabacillus, Lysobacter, and Aureimonas, along with the fungi Paecilomyces maximus and Halophytophthora sp. Most bacterial isolates displayed plant growth–promoting (PGP) traits such as indole‐3‐acetic acid production and nitrogen fixation, supporting their potential contribution to seed germination and early seedling establishment. The detection of Candidatus Celerinatantimonas neptuna, a nitrogen‐fixing symbiont previously described in P. oceanica roots, suggests a possible route of vertical transmission. Although fungal endophytes were less frequent, their presence indicates that P. oceanica seeds may serve as a reservoir of both beneficial and potentially pathogenic taxa. These findings expand our understanding of the P. oceanica holobiont, highlight the role of seeds in the persistence and dissemination of endophytic communities and lay the groundwork for the biotechnological use of seed‐associated microbes in marine plant restoration and conservation, and in crop stress tolerance.

Seagrass Posidonia oceanica seeds host diverse bacterial and fungal endophytes with plant‐growth–promoting traits, including nitrogen fixation and hormone production. These microbes may be vertically transmitted and support seedling establishment, offering insights for marine plant conservation and biotechnological applications.

## Linked entities

- **Species:** Posidonia oceanica (taxon 55489)

## Full-text entities

- **Genes:** PGP (phosphoglycolate phosphatase) [NCBI Gene 283871] {aka AUM, G3PP, PGPase}, Protease [NCBI Gene 52187526]
- **Diseases:** fungal (MESH:D009181), Zostera infection (MESH:D007239), sterility (MESH:D007246)
- **Chemicals:** Water (MESH:D014867), phenol (MESH:D019800), iron (MESH:D007501), NB (MESH:D009556), tungsten carbide (MESH:C002802), isoamyl alcohol (MESH:C029683), HCl (MESH:D006851), 1-aminocyclopropane-1-carboxylic acid (MESH:C023863), ethanol (MESH:D000431), alpha-ketobutyric acid (MESH:C005087), metal (MESH:D008670), TE (MESH:D013691), NaCl (MESH:D012965), Phosphate (MESH:D010710), salt (MESH:D012492), oxygen (MESH:D010100), EDTA (MESH:D004492), Nitrogen (MESH:D009584), chitin (MESH:D002686), Agar (MESH:D000362), CAS (MESH:C015076), carbon (MESH:D002244), carboxymethylcellulose (MESH:D002266), chloroform (MESH:D002725), NFB (MESH:C523711), lugol (MESH:C010389), GA (MESH:D005708), Tween 80 (MESH:D011136), l-tryptophan (MESH:D014364), arsenic (MESH:D001151), IAA (MESH:C030737), Glucose (MESH:D005947), heavy metal (MESH:D019216), CAS medium (-), crystal violet (MESH:D005840), mercury (MESH:D008628), glycerol (MESH:D005990), NA (MESH:D012964), CTAB (MESH:D000077286), alpha-ketobutyrate (MESH:C016635), Starch (MESH:D013213), chlorine (MESH:D002713), sodium hypochlorite (MESH:D012973), Congo Red (MESH:D003224)
- **Species:** Vibrio nitrifigilis (species) [taxon 2789781], Hymenoscyphus fraxineus (ash dieback fungus, species) [taxon 746836], Juncus roemerianus (species) [taxon 879918], Pseudomonadota (proteobacteria, phylum) [taxon 1224], Celerinatantimonas (genus) [taxon 412033], Sporobolus alterniflorus (salt marsh cordgrass, species) [taxon 29706], Halophila ovalis (species) [taxon 62339], Halophytophthora sp. (species) [taxon 1904033], Kocuria (genus) [taxon 57493], Penicillium (genus) [taxon 5073], Thalassia hemprichii (species) [taxon 55496], Halomonas sp. (species) [taxon 1486246], Actinomycetota (actinobacteria, phylum) [taxon 201174], Vibrio (genus) [taxon 662], Vibrio aestuarianus (species) [taxon 28171], Zostera marina (species) [taxon 29655], Vibrio europaeus (species) [taxon 300876], Vibrio ruber (species) [taxon 184755], Marinomonas rhizomae (species) [taxon 491948], Halomonas (genus) [taxon 2745], Marinomonas (genus) [taxon 28253], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Fusarium oxysporum (species) [taxon 5507], Celerinatantimonas yamalensis (species) [taxon 559956], Salicornia subgen. Salicornia (subgenus) [taxon 2116532], Ochroconis [taxon 227045], Lulwoana [taxon 575459], Bacillota (clostridial firmicutes, phylum) [taxon 1239], Vibrio proteolyticus (species) [taxon 671], Posidonia oceanica (species) [taxon 55489], Sesuvium portulacastrum (sea-purslane, species) [taxon 221166], Vibrio sp. (species) [taxon 678], Bacillus (genus) [taxon 55087], P. australis [taxon 425650], Paecilomyces [taxon 357688], Lysobacter (genus) [taxon 68], Sphaeralcea angustifolia (copper globemallow, species) [taxon 217322], Celerinatantimonas diazotrophica (species) [taxon 412034], Staphylococcus warneri (species) [taxon 1292], Atriplex portulacoides (species) [taxon 376799], Salsola rosmarinus (species) [taxon 454547], Anabasis elatior (species) [taxon 798176], Aureimonas (genus) [taxon 414371], Staphylococcus epidermidis (species) [taxon 1282], Kocuria palustris (species) [taxon 71999], Homo sapiens (human, species) [taxon 9606]

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12961358/full.md

---
Source: https://tomesphere.com/paper/PMC12961358