# Pharmacological potential of Chinese botanical drugs in managing chronic kidney disease by targeting mitochondrial quality control

**Authors:** Hongyu Liu, Shumin Huang, Shichun Chen, Shuzhen Liang, Minying Huang, Shiyu Li, Yongxiang Xu, Baocheng Xie

PMC · DOI: 10.3389/fphar.2025.1725842 · Frontiers in Pharmacology · 2026-02-19

## TL;DR

This paper reviews how Chinese botanical drugs may help manage chronic kidney disease by targeting mitochondrial health and gut microbiota interactions.

## Contribution

The paper systematically summarizes CBD's potential in CKD treatment through mitochondrial quality control and gut-microbiota interactions.

## Key findings

- CBD can modulate mitochondrial quality control to slow CKD progression.
- The gut microbiota-mitochondria axis plays a pivotal role in CKD development.
- Current CBD formulations show promise but lack sufficient clinical validation.

## Abstract

Chronic kidney disease (CKD) is a multifactorial health issue characterized by structural and functional impairments of the kidneys, with significant incidence and mortality rates in global populations. Mitochondrial quality control (MQC) comprises cellular mechanisms that maintain mitochondrial health, and imbalances in the MQC system, including abnormalities in mitochondrial oxidative stress, dynamics, biogenesis, autophagy, and apoptosis, have been implicated in the onset and progression of CKD. In addition, the interplay between gut microbiota, microbial metabolites, and mitochondrial integrity has gained increasing attention in CKD research. Consequently, therapeutic strategies targeting MQC have attracted considerable research interest. Chinese botanical drugs (CBD), known for their multi-component, multi-target profiles and favorable safety, demonstrate considerable potential in slowing CKD progression by modulating MQC. This review systematically summarizes current evidence on CBD metabolites and formulations that ameliorate CKD through MQC regulation. Firstly, we outline the mechanisms of action of MQC system, with a focus on its role in CKD. We then discussed the pivotal role of the gut microbiota-microbial metabolites-mitochondria axis in the progression of CKD. Finally, we provide a summary of CBD metabolites and formulations that target the MQC system for CKD treatment to date, and explore their specific therapeutic mechanisms. Despite promising preclinical findings, we also critically assess limitations within the available literature, such as methodological variability and a lack of clinical validation. By integrating current knowledge and identifying key research gaps, this review aims to inform future studies and advance the development of CBD-based therapies for CKD.

## Linked entities

- **Diseases:** chronic kidney disease (MONDO:0005300)

## Full-text entities

- **Genes:** Pparg (peroxisome proliferator-activated receptor gamma) [NCBI Gene 25664] {aka PPARgamma2}, BBC3 (BCL2 binding component 3) [NCBI Gene 27113] {aka JFY-1, JFY1, PUMA}, Havcr1 (hepatitis A virus cellular receptor 1) [NCBI Gene 286934] {aka KIM-1, Kim1}, Anxa3 (annexin A3) [NCBI Gene 25291] {aka Anx3, LC3, LRRGT00047}, PRKAA2 (protein kinase AMP-activated catalytic subunit alpha 2) [NCBI Gene 5563] {aka AMPK, AMPK2, AMPKa2, PRKAA}, Pink1 (PTEN induced putative kinase 1) [NCBI Gene 68943] {aka 1190006F07Rik, BRPK, mFLJ00387}, Pink1 (PTEN induced kinase 1) [NCBI Gene 298575], Khdrbs1 (KH RNA binding domain containing, signal transduction associated 1) [NCBI Gene 117268] {aka P62, Sam68}, Prkaa2 (protein kinase AMP-activated catalytic subunit alpha 2) [NCBI Gene 78975] {aka Ampk, Ampka2}, HMOX1 (heme oxygenase 1) [NCBI Gene 3162] {aka HMOX1D, HO-1, HSP32, bK286B10}, Gabarap (GABA type A receptor-associated protein) [NCBI Gene 58974], Hspa5 (heat shock protein family A (Hsp70) member 5) [NCBI Gene 25617] {aka BIP, GRP 78, GRP78}, Grn (granulin precursor) [NCBI Gene 29143] {aka PEPI, PGRN}, F2rl2 (coagulation factor II (thrombin) receptor-like 2) [NCBI Gene 29636] {aka PAR3}, Fundc1 (FUN14 domain containing 1) [NCBI Gene 72018] {aka 1500005J14Rik, 1810033P05Rik}, Eif2ak3 (eukaryotic translation initiation factor 2 alpha kinase 3) [NCBI Gene 13666] {aka Pek, Perk}, Pkm (pyruvate kinase M1/2) [NCBI Gene 25630] {aka PK, PKM12, Pk3, Pkm2}, BCL2L14 (BCL2 like 14) [NCBI Gene 79370] {aka BCLG}, Qprt (quinolinate phosphoribosyltransferase) [NCBI Gene 293504], Ddit3 (DNA-damage inducible transcript 3) [NCBI Gene 29467] {aka CHOP, CHOP-10, Chop10, Gadd153, RM4}, PMAIP1 (phorbol-12-myristate-13-acetate-induced protein 1) [NCBI Gene 5366] {aka APR, NOXA}, Ahr (aryl hydrocarbon receptor) [NCBI Gene 25690], Casp3 (caspase 3) [NCBI Gene 25402] {aka CPP32-beta, Lice, Yama}, MCL1 (MCL1 apoptosis regulator, BCL2 family member) [NCBI Gene 4170] {aka BCL2L3, EAT, MCL1-ES, MCL1L, MCL1S, Mcl-1}, Casp12 (caspase 12) [NCBI Gene 156117], Bcl2 (BCL2, apoptosis regulator) [NCBI Gene 24224] {aka Bcl-2}, Nfe2l2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 83619], Dnm1l (dynamin 1-like) [NCBI Gene 114114] {aka DLP1, Dnml1, Drp1}, BCL2L11 (BCL2 like 11) [NCBI Gene 10018] {aka BAM, BIM, BOD}, OPA1 (OPA1 mitochondrial dynamin like GTPase) [NCBI Gene 4976] {aka BERHS, MGM1, MTDPS14, MTDPS14A, MTDPS14B, NPG}, Map1lc3a (microtubule-associated protein 1 light chain 3 alpha) [NCBI Gene 362245] {aka LC3-I, LC3-II, LC3A}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, Prdx6-ps2 (peroxiredoxin 6 pseudogene 2) [NCBI Gene 384001] {aka Aop2-rs2, GPx*, Prdx6-rs2}, SLC5A2 (solute carrier family 5 member 2) [NCBI Gene 6524] {aka SGLT2}, Bnip3l (BCL2 interacting protein 3 like) [NCBI Gene 140923] {aka Nix, UV93}, BCL2L1 (BCL2 like 1) [NCBI Gene 598] {aka BCL-XL/S, BCL2L, BCLX, Bcl-X, PPP1R52}, Agt (angiotensinogen) [NCBI Gene 24179] {aka ANRT, Ang, AngII, PAT}, Aifm1 (apoptosis inducing factor, mitochondria associated 1) [NCBI Gene 83533] {aka Aif, Pdcd8}, Nup62 (nucleoporin 62) [NCBI Gene 18226] {aka D7Ertd649e, Nupc1, p62}, MFN2 (mitofusin 2) [NCBI Gene 9927] {aka CMT2A, CMT2A2, CMT2A2A, CMT2A2B, CPRP1, HMSN6A}, Tlr4 (toll-like receptor 4) [NCBI Gene 29260], Akt1 (AKT serine/threonine kinase 1) [NCBI Gene 24185] {aka Akt}, Mfn1 (mitofusin 1) [NCBI Gene 192647] {aka Fzo1b}, Fn1 (fibronectin 1) [NCBI Gene 25661] {aka FIBNEC, fn-1}, Tjp1 (tight junction protein 1) [NCBI Gene 292994] {aka ZO-1}, Xdh (xanthine dehydrogenase) [NCBI Gene 22436] {aka XO, Xor, Xox-1, Xox1}, Foxo1 (forkhead box O1) [NCBI Gene 84482] {aka Fkhr, Foxo1a}, Hif1a (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 29560] {aka HIF1-alpha, MOP1}, Pyy (peptide YY) [NCBI Gene 287730] {aka GHYY, RATGHYY, Yy, peptide-YY}, Dnm1l (dynamin 1-like) [NCBI Gene 74006] {aka 6330417M19Rik, Dlp1, Dnmlp1, Drp1, python}, Kcp (kielin cysteine rich BMP regulator) [NCBI Gene 296952] {aka Crim2, RGD1561119}, Bak1 (BCL2-antagonist/killer 1) [NCBI Gene 12018] {aka Bak, N-BAK1, N-Bak}, Ppargc1b (PPARG coactivator 1 beta) [NCBI Gene 291567] {aka PGC1beta, Perc}, Tfrc (transferrin receptor) [NCBI Gene 64678] {aka Trfr}, Alb (albumin) [NCBI Gene 24186] {aka Alb1, Albza}, Sds (serine dehydratase) [NCBI Gene 25044] {aka RATSDHE1, SDH2, Sdh, Sdhe1, TDH}, Nox4 (NADPH oxidase 4) [NCBI Gene 85431], Opa1 (OPA1, mitochondrial dynamin like GTPase) [NCBI Gene 171116], Txnip (thioredoxin interacting protein) [NCBI Gene 117514] {aka Vdup1}, Atg5 (autophagy related 5) [NCBI Gene 365601]
- **Diseases:** hepatic diseases (MESH:D056486), CBD (MESH:C562377), inflammatory bowel disease (MESH:D015212), Renal mitochondrial dysfunction (MESH:D007674), infarction (MESH:D007238), MQC (MESH:D007174), mitochondrial fragmentation (MESH:D012892), IMM (MESH:D015433), T2DM (MESH:D003924), necrosis (MESH:D009336), UUO (MESH:D014517), pheochromocytoma (MESH:D010673), ketoacidosis (MESH:D007662), renal tubulointerstitial fibrosis (OMIM:162000), DKD (MESH:D003928), gut microbiota (MESH:C536735), liver and kidney yin deficiency syndrome (MESH:D016710), qi deficiency (MESH:D007153), hyperglycemic (MESH:D006944), III (MESH:C537189), hypertension (MESH:D006973), blood deficiency (MESH:D006402), diabetic tubular damage (MESH:D058065), rhabdomyolysis (MESH:D012206), RF (MESH:C538347), thrombosis (MESH:D013927), IRI (MESH:D015427), biogenesis (MESH:C536664), OS (MESH:D000079225), glomerulonephritis (MESH:D005921), Clostridium difficile (MESH:D003015), insulin resistance (MESH:D007333), toxicity (MESH:D064420), renal tubular EMT (MESH:D000141), TMAO (MESH:C536108), vascular injury (MESH:D057772), colitis (MESH:D003092), MCAO/R (MESH:C580424), glomerular hypertrophy (MESH:D006984), cardiovascular, gastrointestinal, and respiratory disorders (MESH:D005767), chronic renal failure (MESH:D007676), infection (MESH:D007239), cardiovascular diseases (MESH:D002318), uremic toxin (MESH:D006463), Crohn's disease (MESH:D003424), hemoptysis (MESH:D006469), diarrhea (MESH:D003967), acute kidney injury (MESH:D058186), chronic nephritis (MESH:D009393), diabetic vascular complications (MESH:D003925), hypoxic (MESH:D002534), obesity (MESH:D009765), hemorrhage (MESH:D006470), structural (MESH:D020914), organ failure (MESH:D009102), hematemesis (MESH:D006396), CIN (MESH:D005119), hypoxia (MESH:D000860), contrast-associated nephropathy (MESH:D016263), HN (MESH:C563161)
- **Chemicals:** HSA (MESH:D006585), OH- (MESH:C031356), AS-IV (MESH:C052064), coenzyme Q (MESH:D014451), lipid (MESH:D008055), chicoric acid (MESH:C100435), urea nitrogen (MESH:C530477), Leonurine (MESH:C013587), LPS (MESH:D008070), palmitic acid (MESH:D019308), docosahexaenoic acid (MESH:D004281), butyric acid (MESH:D020148), Steroid hormone (MESH:D013256), GSH (MESH:D005978), Sorbic acid (MESH:D013011), Polyphenols (MESH:D059808), ATP (MESH:D000255), Catalpol (MESH:C078040), APS (MESH:D000250), CM (MESH:D003476), Berberine (MESH:D001599), CA (MESH:D002118), saponins (MESH:D012503), ROS (MESH:D017382), MitoSOX (MESH:C521281), Glycosides (MESH:D006027), Baicalin (MESH:C038044), SCFA (MESH:D005232), SA (MESH:C001945), Flavonoids (MESH:D005419), potassium oxide (MESH:C068440), glucose (MESH:D005947), creatinine (MESH:D003404), tryptophan (MESH:D014364), NAD+ (MESH:D009243), flavones (MESH:D047309), acetate (MESH:D000085), glucuronic acid (MESH:D020723), disulfide (MESH:D004220), sodium (MESH:D012964), indoxyl sulfate (MESH:D007200), bismuth (MESH:D001729), doxorubicin (MESH:D004317), AS-II (MESH:C580601), bile acid (MESH:D001647), H2S (MESH:D006862), sulfur (MESH:D013455), Curcumin (MESH:D003474), puerarin (MESH:C033607), GA (MESH:D006034), aluminum (MESH:D000535), superoxide (MESH:D013481), Fe2+ (-), H2O2 (MESH:D006861), SB (MESH:D000077385), Grape seed proanthocyanidin (MESH:C511402), CP (MESH:D002945), fatty acid (MESH:D005227), malondialdehyde (MESH:D008315), monoterpene (MESH:D039821)
- **Species:** Panax notoginseng (notoginseng, species) [taxon 44586], Akkermansia (genus) [taxon 239934], Glycyrrhiza glabra (species) [taxon 49827], Angelica archangelica (wild parsnip, species) [taxon 40949], Bacillota (clostridial firmicutes, phylum) [taxon 1239], Enterobacteriaceae (enterobacteria, family) [taxon 543], Radix (genus) [taxon 55689], Shigella (genus) [taxon 620], Curcuma longa (turmeric, species) [taxon 136217], Bacteroidia (class) [taxon 200643], Spirillaceae (family) [taxon 119068], Ophiopogon japonicus (species) [taxon 100506], Abelmoschus manihot (aibika, species) [taxon 183220], Salvia miltiorrhiza (Chinese salvia, species) [taxon 226208], Codonopsis pilosula (species) [taxon 86864], Euphorbia humifusa (species) [taxon 212301], Lactobacillus gasseri (species) [taxon 1596], Atractylodes macrocephala (species) [taxon 265785], Paeonia lactiflora (Chinese peony, species) [taxon 35924], Centella asiatica (Asiatic pennywort, species) [taxon 48106], Dioscorea bulbifera (aerial yam, species) [taxon 35874], Rhodiola rosea (rose-root, species) [taxon 203015], Ziziphus jujuba (Chinese jujube, species) [taxon 326968], Homo sapiens (human, species) [taxon 9606], Bifidobacterium (genus) [taxon 1678], Rodentia (rodent, order) [taxon 9989], Wisteriopsis reticulata (species) [taxon 54882], Clostridium (genus) [taxon 1485], Fusobacterium (genus) [taxon 848], Bacteroides (genus) [taxon 816], Rehmannia glutinosa (Chinese foxglove, species) [taxon 99300], Curcuma zedoaria (species) [taxon 136224], Rattus norvegicus (brown rat, species) [taxon 10116], Pseudomonadota (proteobacteria, phylum) [taxon 1224], Veillonella (genus) [taxon 29465], Leonurus cardiaca (species) [taxon 587664], Ruminococcus (genus) [taxon 1263], Sutterella (genus) [taxon 40544], Plantago asiatica (Asian plantain, species) [taxon 197796], Wolfiporia cocos (species) [taxon 81056], Escherichia coli (E. coli, species) [taxon 562], Scrophularia ningpoensis (xuan shen, species) [taxon 291326], Faecalibacterium (genus) [taxon 216851], Coptis chinensis (species) [taxon 261450], Cuscuta epithymum (clover dodder, species) [taxon 186058], Paeonia suffruticosa (moutan peony, species) [taxon 45171], Angelica sinensis (Chinese angelica, species) [taxon 165353], Mus musculus (house mouse, species) [taxon 10090], Prevotella (genus) [taxon 838]
- **Cell lines:** PC12 — Rattus norvegicus (Rat), Rat adrenal gland pheochromocytoma, Cancer cell line (CVCL_0481), LLC-PK1 — Sus scrofa (Pig), Spontaneously immortalized cell line (CVCL_0391), NRK-52E — Rattus norvegicus (Rat), Spontaneously immortalized cell line (CVCL_0468), MPC-5 — Mus musculus (Mouse), Conditionally immortalized cell line (CVCL_AS87), T3-L1 — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_0123)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12960602/full.md

## References

324 references — full list in the complete paper: https://tomesphere.com/paper/PMC12960602/full.md

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Source: https://tomesphere.com/paper/PMC12960602