# Molecular pathways and emerging therapeutic targets in the pathogenesis of diabetic kidney disease

**Authors:** Sima Al-Masri, Jennifer N. Coelho, Linto Thomas

PMC · DOI: 10.3389/fphys.2026.1747053 · Frontiers in Physiology · 2026-02-19

## TL;DR

This paper reviews molecular pathways in diabetic kidney disease and explores new therapeutic strategies to prevent kidney damage.

## Contribution

The paper synthesizes recent mechanistic insights and highlights novel upstream therapeutic approaches for diabetic kidney disease.

## Key findings

- Multiple pathways like AGE-RAGE signaling and RAAS dysregulation contribute to diabetic kidney disease progression.
- Epigenetic and non-coding RNA changes sustain kidney damage despite improved blood sugar control.
- Emerging therapies target gene-regulatory circuits and metabolic pathways to prevent kidney injury.

## Abstract

Diabetic kidney disease (DKD) arises from intersecting metabolic, hemodynamic, inflammatory, and epigenetic programs that progressively remodel the glomerulus and tubulointerstitium on a molecular level. Hyperglycemia-driven AGE-RAGE signaling, PKC activation, and RAAS dysregulation converge on oxidative stress, endothelial dysfunction, and profibrotic transcription (e.g., TGF-beta/Smad), while mitochondrial and endoplasmic-reticulum stress amplify lipotoxicity and cell death. Innate immune activation (macrophage recruitment and inflammasome signaling) and maladaptive repair promote extracellular-matrix accumulation and nephron loss. Multi-omics studies further implicate durable chromatin and non-coding RNA changes that sustain metabolic memory despite improved glycemia. In this review, we synthesize landmark and recent mechanistic data spanning glomerular filtration barrier injury, tubular stress pathways, and immune-metabolic crosstalk, and we highlight therapeutic strategies that move upstream of symptom control. We discuss established disease-modifying agents (RAAS blockade, SGLT2 inhibitors, and non-steroidal MR antagonists) alongside investigational approaches including epigenetic modulators, AMPK/NAD + axis targeting, and gene/RNA-based interventions. Together, these advances frame DKD as a disorder of rewired signaling and gene-regulatory circuitry, where convergent molecular nodes across podocytes, endothelium, and tubules offer the actionable considerations for durable renal protection.

## Linked entities

- **Genes:** TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040], Smox (Smad on X) [NCBI Gene 31738]
- **Diseases:** diabetic kidney disease (MONDO:0005016)

## Full-text entities

- **Genes:** SOD3 (superoxide dismutase 3) [NCBI Gene 6649] {aka EC-SOD}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, AGER (advanced glycosylation end-product specific receptor) [NCBI Gene 177] {aka RAGE, SCARJ1, sRAGE}, CST3 (cystatin C) [NCBI Gene 1471] {aka ADLDWA, ARMD11, HEL-S-2}, Sting1 (stimulator of interferon response cGAMP interactor 1) [NCBI Gene 72512] {aka 2610307O08Rik, ERIS, MPYS, Mita, STING, STING-beta}, GLP1R (glucagon like peptide 1 receptor) [NCBI Gene 2740] {aka GLP-1, GLP-1-R, GLP-1R}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, MIR192 (microRNA 192) [NCBI Gene 406967] {aka MIRN192, miR-192, miRNA192}, METRNL (meteorin like, glial cell differentiation regulator) [NCBI Gene 284207], VEGFB (vascular endothelial growth factor B) [NCBI Gene 7423] {aka VEGFL, VRF}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, DEFB4A (defensin beta 4A) [NCBI Gene 1673] {aka BD-2, DEFB-2, DEFB102, DEFB2, DEFB4, HBD-2}, SGCB (sarcoglycan beta) [NCBI Gene 6443] {aka A3b, LGMD2E, LGMDR4, SGC}, PRKAB1 (protein kinase AMP-activated non-catalytic subunit beta 1) [NCBI Gene 5564] {aka AMPK, HAMPKb}, CD68 (CD68 molecule) [NCBI Gene 968] {aka GP110, LAMP4, SCARD1}, MIR155 (microRNA 155) [NCBI Gene 406947] {aka MIRN155, miRNA155, mir-155}, HAVCR1 (hepatitis A virus cellular receptor 1) [NCBI Gene 26762] {aka CD365, HAVCR, HAVCR-1, KIM-1, KIM1, TIM}, DNMT3B (DNA methyltransferase 3 beta) [NCBI Gene 1789] {aka FSHD4, ICF, ICF1, M.HsaIIIB}, CCN2 (cellular communication network factor 2) [NCBI Gene 1490] {aka CTGF, HCS24, IBP-8, IGFBP8, KMD, NOV2}, REN (renin) [NCBI Gene 5972] {aka ADTKD4, HNFJ2, RTD}, MIR1263 (microRNA 1263) [NCBI Gene 100302148] {aka MIRN1263, hsa-mir-1263}, VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422] {aka L-VEGF, MVCD1, VEGF, VPF}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, MAPK1 (mitogen-activated protein kinase 1) [NCBI Gene 5594] {aka ERK, ERK-2, ERK2, ERT1, MAPK2, NS13}, PRKCB (protein kinase C beta) [NCBI Gene 5579] {aka PKC-beta, PKCB, PKCI(2), PKCbeta, PRKCB1, PRKCB2}, FN1 (fibronectin 1) [NCBI Gene 2335] {aka CIG, ED-B, FINC, FN, FNZ, GFND}, PPARA (peroxisome proliferator activated receptor alpha) [NCBI Gene 5465] {aka NR1C1, PPAR, PPAR-alpha, PPARalpha, hPPAR}, CYP11B2 (cytochrome P450 family 11 subfamily B member 2) [NCBI Gene 1585] {aka ALDOS, CPN2, CYP11B, CYP11BL, CYPXIB2, P-450C18}, NLRP3 (NLR family pyrin domain containing 3) [NCBI Gene 114548] {aka AGTAVPRL, AII, AVP, C1orf7, CIAS1, CLR1.1}, ESRRG (estrogen related receptor gamma) [NCBI Gene 2104] {aka ERR-gamma, ERR3, ERRg, ERRgamma, NR3B3}, SLC5A2 (solute carrier family 5 member 2) [NCBI Gene 6524] {aka SGLT2}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, AGT (angiotensinogen) [NCBI Gene 183] {aka ANHU, SERPINA8, hFLT1}, SLC5A1 (solute carrier family 5 member 1) [NCBI Gene 6523] {aka D22S675, NAGT, SGLT-1, SGLT1}, HDAC9 (histone deacetylase 9) [NCBI Gene 9734] {aka HD7, HD7b, HD9, HDAC, HDAC7B, HDAC9B}, PRKCA (protein kinase C alpha) [NCBI Gene 5578] {aka AAG6, PKC-alpha, PKCA, PKCI+/-, PKCalpha}, DNER (delta/notch like EGF repeat containing) [NCBI Gene 92737] {aka UNQ26, bet}, NR3C2 (nuclear receptor subfamily 3 group C member 2) [NCBI Gene 4306] {aka MCR, MLR, MR, NR3C2VIT}, PRRT2 (proline rich transmembrane protein 2) [NCBI Gene 112476] {aka BFIC2, BFIS2, DSPB3, DYT10, EKD1, FICCA}, NFE2L2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 4780] {aka IMDDHH, NRF2, Nrf-2}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, Cgas (cyclic GMP-AMP synthase) [NCBI Gene 214763] {aka E330016A19Rik, Mb21d1}, MIR21 (microRNA 21) [NCBI Gene 406991] {aka MIRN21, hsa-mir-21, miR-21, miRNA21}, RENBP (renin binding protein) [NCBI Gene 5973] {aka RBP, RNBP}, HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}, Gip (gastric inhibitory polypeptide) [NCBI Gene 14607], NOS3 (nitric oxide synthase 3) [NCBI Gene 4846] {aka EC-NOS, ECNOS, MYMY8, NOSIII, cNOS, eNOS}, SMAD3 (SMAD family member 3) [NCBI Gene 4088] {aka HSPC193, HsT17436, JV15-2, LDS1C, LDS3, MADH3}, PTK2B (protein tyrosine kinase 2 beta) [NCBI Gene 2185] {aka CADTK, CAKB, FADK2, FAK2, PKB, PTK}, Sirt3 (sirtuin 3) [NCBI Gene 64384] {aka 2310003L23Rik, Sir2l3}, DNMT1 (DNA methyltransferase 1) [NCBI Gene 1786] {aka ADCADN, AIM, CXXC9, DNMT, HSN1E, MCMT}
- **Diseases:** fibrosis (MESH:D005355), Hyperglycemia (MESH:D006943), injury (MESH:D014947), Inflammation (MESH:D007249), Mitochondrial dysfunction (MESH:D028361), expansion (OMIM:616452), hyperkalemia (MESH:D006947), endothelial dysfunction (MESH:D014652), Diabetes (MESH:D003920), malignancies (MESH:D009369), tubular injury (MESH:D000230), kidney failure (MESH:D051437), nephron loss (MESH:D007683), CKD (MESH:D051436), atrophy (MESH:D001284), loss of renal function (MESH:D058186), proteinuria (MESH:D011507), hypoxia (MESH:D000860), glomerular and tubular injury (MESH:D015499), albuminuria (MESH:D000419), glomerulosclerosis (MESH:D005921), hypertension (MESH:D006973), diabetic complications (MESH:D048909), death (MESH:D003643), end-stage renal disease (MESH:D007676), glomerular hypertrophy (MESH:D006984), diabetic retinopathy (MESH:D003930), microvascular complications (OMIM:603933), hypoglycemia (MESH:D007003), insulin resistance (MESH:D007333), vascular dysfunction (MESH:D002561), heart failure (MESH:D006333), glomerular and tubular damage (MESH:D007674), type 1 and type 2 diabetes (MESH:D003924), mycotic infections (MESH:D015821), diabetic ketoacidosis (MESH:D016883), organelle dysfunction (MESH:D006331), lipid (MESH:D011017), DKD (MESH:D003928), immune dysregulation (OMIM:614878), chronic (MESH:D002908), neuropathy (MESH:D009422), tissue injury (MESH:D017695)
- **Chemicals:** NaCl (MESH:D012965), oxygen (MESH:D010100), sugars (MESH:D000073893), phosphate (MESH:D010710), urate (MESH:D014527), lipoic acid (MESH:D008063), losartan (MESH:D019808), aldosterone (MESH:D000450), metformin (MESH:D008687), LY333531 (MESH:C099154), AGEs (MESH:D017127), canagliflozin (MESH:D000068896), trichostatin A (MESH:C012589), pentoxifylline (MESH:D010431), free fatty acids (MESH:D005230), glycemia (MESH:D001786), ceramides (MESH:D002518), irbesartan (MESH:D000077405), decitabine (MESH:D000077209), cholesterol (MESH:D002784), BI 690517 (-), sodium (MESH:D012964), apabetalone (MESH:C000628794), bardoxolone methyl (MESH:C445068), dapagliflozin (MESH:C529054), fatty acid (MESH:D005227), valproate (MESH:D014635), Sacubitril (MESH:C000717211), ATP (MESH:D000255), Lipid (MESH:D008055), DAG (MESH:D004075), baricitinib (MESH:C000596027), atrasentan (MESH:D000077868), NAD + (MESH:D009243), Finerenone (MESH:C576501), ROS (MESH:D017382), Val (MESH:D000068756), creatinine (MESH:D003404), NR (MESH:C018613), 5-azacytidine (MESH:D001374), glucose (MESH:D005947), magnesium (MESH:D008274)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]

## Full text

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## References

121 references — full list in the complete paper: https://tomesphere.com/paper/PMC12960186/full.md

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Source: https://tomesphere.com/paper/PMC12960186