# A case report and literature review of duodenal adenocarcinoma with complete loss of mismatch repair proteins

**Authors:** Jie Ao, Xiangfeng Zhu, Yuan Zhao, Mimi Zhao, Yi Luo, Qiushi Wang

PMC · DOI: 10.3389/fonc.2026.1749558 · Frontiers in Oncology · 2026-02-19

## TL;DR

This paper reports a rare case of duodenal cancer with complete loss of DNA repair proteins, highlighting its unique molecular features and treatment implications.

## Contribution

The study presents a rare, molecularly confirmed case of complete MMR protein loss in duodenal adenocarcinoma.

## Key findings

- The tumor showed complete loss of MLH1, PMS2, MSH2, and MSH6 proteins.
- Molecular profiling confirmed MSI-H, TMB-H, and somatic mutations in MSH2 and MSH6.
- The case suggests a somatic origin distinct from classic hereditary cancer pathways.

## Abstract

Deficient mismatch repair (dMMR)/microsatellite instability-high (MSI-H) phenotype holds significant prognostic and therapeutic implications in gastrointestinal cancers. While typically characterized by loss of specific MMR protein pairs, the concomitant loss of all four MMR proteins (MLH1, PMS2, MSH2, MSH6) is scarcely documented, with molecularly confirmed cases being exceptionally rare.

We presented a case of duodenal adenocarcinoma whose contrast-enhanced 64-row CT and PET/CT demonstrated characteristic features highly suspicious for malignancy. Subsequently, the patient underwent duodenal resection. Histopathology showed moderately differentiated adenocarcinoma invading the subserosa and immunohistochemical staining revealed MLH1, PMS2, MSH2 and MSH6 were completely lost in tumor cells. Molecular profiling confirmed MSI-H status, high tumor mutational burden (TMB-H), MLH1 promoter hypermethylation and somatic mutations in MSH2 and MSH6 genes, but without pathogenic germline variants.

We represent a molecularly validated case of dMMR duodenal adenocarcinoma, suggesting a somatic molecular pathogenesis distinct from classic intestinal cancer. The findings highlight the critical importance of comprehensive molecular characterization in rare tumors, as accurate identification of these phenotypes are important for optimal treatment selection, particularly immune checkpoint inhibitor therapies for gastrointestinal malignancies.

## Linked entities

- **Genes:** MLH1 (mutL homolog 1) [NCBI Gene 4292], PMS2 (PMS1 homolog 2, mismatch repair system component) [NCBI Gene 5395], MSH2 (mutS homolog 2) [NCBI Gene 4436], MSH6 (mutS homolog 6) [NCBI Gene 2956]
- **Proteins:** MLH1 (mutL homolog 1), PMS2 (PMS1 homolog 2, mismatch repair system component), MSH2 (mutS homolog 2), MSH6 (mutS homolog 6)
- **Diseases:** duodenal adenocarcinoma (MONDO:0006186)

## Full-text entities

- **Genes:** ERF (ETS2 repressor factor) [NCBI Gene 2077] {aka CHYTS, CRS4, PE-2, PE2}, SOX9 (SRY-box transcription factor 9) [NCBI Gene 6662] {aka CMD1, CMPD1, ENH13, SRA1, SRXX2, SRXY10}, ERBB3 (erb-b2 receptor tyrosine kinase 3) [NCBI Gene 2065] {aka ErbB-3, FERLK, HER3, LCCS2, MDA-BF-1, VSCN1}, PIK3R1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 5295] {aka AGM7, GRB1, IMD36, p85, p85-ALPHA, p85alpha}, KRAS (KRAS proto-oncogene, GTPase) [NCBI Gene 3845] {aka 'C-K-RAS, C-K-RAS, CFC2, K-RAS2A, K-RAS2B, K-RAS4A}, B2M (beta-2-microglobulin) [NCBI Gene 567] {aka AMYLD6, IMD43, MHC1D4}, PMS2 (PMS1 homolog 2, mismatch repair system component) [NCBI Gene 5395] {aka HNPCC4, LYNCH4, MLH4, MMRCS4, PMS-2, PMSL2}, MSX2 (msh homeobox 2) [NCBI Gene 4488] {aka CRS2, FPP, HOX8, MSH, PFM, PFM1}, IFNGR1 (interferon gamma receptor 1) [NCBI Gene 3459] {aka CD119, IFNGR, IMD27A, IMD27B}, RNF43 (ring finger protein 43) [NCBI Gene 54894] {aka RNF124, SSPCS, URCC}, KMT2B (lysine methyltransferase 2B) [NCBI Gene 9757] {aka CXXC10, DYT28, HRX2, MLL1B, MLL2, MLL4}, NRAS (NRAS proto-oncogene, GTPase) [NCBI Gene 4893] {aka ALPS4, CMNS, N-ras, NCMS, NRAS1, NS6}, PBRM1 (polybromo 1) [NCBI Gene 55193] {aka BAF180, PB1, RCC, SMARCH1}, MLH1 (mutL homolog 1) [NCBI Gene 4292] {aka COCA2, FCC2, HNPCC, HNPCC2, LYNCH2, MLH-1}, DNMT3A (DNA methyltransferase 3 alpha) [NCBI Gene 1788] {aka DNMT3A2, HESJAS, M.HsaIIIA, TBRS}, MSH6 (mutS homolog 6) [NCBI Gene 2956] {aka GTBP, GTMBP, HNPCC5, HSAP, LYNCH5, MMRCS3}, MSH2 (mutS homolog 2) [NCBI Gene 4436] {aka COCA1, FCC1, HNPCC, HNPCC1, LCFS2, LYNCH1}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, SETD2 (SET domain containing 2, histone lysine methyltransferase) [NCBI Gene 29072] {aka HBP231, HIF-1, HIP-1, HSPC069, HYPB, KMT3A}, KMT2D (lysine methyltransferase 2D) [NCBI Gene 8085] {aka AAD10, ALR, BCAHH, CAGL114, KABUK1, KMS}, EPCAM (epithelial cell adhesion molecule) [NCBI Gene 4072] {aka Ber-Ep4, BerEp4, DIAR5, EGP-2, EGP314, EGP40}, BRAF (B-Raf proto-oncogene, serine/threonine kinase) [NCBI Gene 673] {aka B-RAF1, B-raf, BRAF-1, BRAF1, NS7, RAFB1}
- **Diseases:** CRC (MESH:D015179), metastases (MESH:D009362), acid reflux (MESH:D005764), Deficiency of MMR system (MESH:C536928), MSI (MESH:D053842), intestinal cancer (MESH:D007414), Duodenal adenocarcinoma (MESH:D000230), cancer (MESH:D009369), tenderness (MESH:D063806), tumorigenesis (MESH:D063646), gastrointestinal cancers (MESH:D005770), intestinal obstruction (MESH:D007415), reactive (MESH:D000275), abdominal distension (MESH:D000007), duodenal lesion (MESH:D004378), vomiting (MESH:D014839), LS (MESH:D003123), duodenal and small intestinal adenocarcinomas (MESH:C538260), hyperplasia (MESH:D006965), duodenal dilation (MESH:D004382), H (MESH:D000848), duodenal and gastric dilation (MESH:D013271)
- **Chemicals:** Hematoxylin (MESH:D006416), H&amp;E (MESH:D006371), dMMR (-), Toripalimab (MESH:C000656314), FDG (MESH:D019788), cetuximab (MESH:D000068818), pembrolizumab (MESH:C582435), panitumumab (MESH:D000077544), eosin (MESH:D004801), nivolumab (MESH:D000077594)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** c.37_38del, p.K567E, G310A, p.R371*, p.P59fs, C817T, C1111T, p.I279fs, p.T478fs, A1699G, c.913delA, c.176delC, p.T305fs, p.R273C, c.3254dupC, p.R196*, p.A328fs, c.896delG, c.835delA, c.252 + 1G>A, p.P2354fs, p.G299fs, c.644delC, p.V104M, p.T1085fs, c.A3052T, p.S378fs, V600E, c.C586T, p.K1018*, c.1433dupC, p.T215fs, c.983delC, p.L13fs, c.7061delC

## Full text

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## Figures

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## References

26 references — full list in the complete paper: https://tomesphere.com/paper/PMC12960096/full.md

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Source: https://tomesphere.com/paper/PMC12960096