# Structural remodeling of the mitochondrial protein biogenesis machinery under proteostatic stress

**Authors:** Kenneth Ehses, Jorge P. López-Alonso, Odetta Antico, Yannik Lang, Till Rudack, Abdussalam Azem, Miratul M. K. Muqit, Iban Ubarretxena-Belandia, Rubén Fernández-Busnadiego

PMC · DOI: 10.1126/sciadv.aed3579 · Science Advances · 2026-03-04

## TL;DR

The study reveals how mitochondria restructure their protein-making systems when under stress to maintain protein balance.

## Contribution

The paper provides structural insights into mitochondrial proteostatic stress using cryo–electron tomography and in vitro structures of mHsp60.

## Key findings

- Protein aggregates and cristae remodeling occur in mitochondria under proteostatic stress.
- Mitochondrial ribosome complexes decrease during stress, and mHsp60 undergoes conformational changes.
- Structural data of mHsp60 interactions reveal its functional cycle in mitochondrial protein folding.

## Abstract

Cells have evolved organelle-specific responses to maintain protein homeostasis (proteostasis). During proteostatic stress, mitochondria down-regulate translation and enhance protein folding, yet the underlying mechanisms remain poorly defined. Here, we used cryo–electron tomography to observe the structural consequences of mitochondrial proteostatic stress within human cells. We detected protein aggregates within the mitochondrial matrix, accompanied by a marked remodeling of cristae architecture. Concomitantly, the number of mitochondrial ribosome complexes was significantly reduced. Mitochondrial Hsp60 (mHsp60), a key protein folding machine, underwent major conformational changes to favor complexes with its co-chaperone mHsp10. We visualized the interactions of mHsp60 with native substrate proteins and determined in vitro mHsp60 cryo–electron microscopy structures enabling nucleotide state assignment of the in situ structures. These data converge on a model of the mHsp60 functional cycle and its essential role in mitochondrial proteostasis. More broadly, our findings reveal structural mechanisms governing mitochondrial protein biosynthesis and their remodeling under proteostatic stress.

Cryo–electron tomography reveals how mitochondria reorganize their translation and folding systems under proteostatic stress.

## Linked entities

- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** GroEL [NCBI Gene 13903475], ATF4 (activating transcription factor 4) [NCBI Gene 468] {aka CREB-2, CREB2, TAXREB67, TXREB}, PTCD3 (pentatricopeptide repeat domain 3) [NCBI Gene 55037] {aka COXPD51, MRP-S39, mS39}, TRAP1 (TNF receptor associated protein 1) [NCBI Gene 10131] {aka HSP 75, HSP75, HSP90L, TRAP-1}, TIMM23 (translocase of inner mitochondrial membrane 23) [NCBI Gene 100287932] {aka TIM23}, OPA1 (OPA1 mitochondrial dynamin like GTPase) [NCBI Gene 4976] {aka BERHS, MGM1, MTDPS14, MTDPS14A, MTDPS14B, NPG}, MARVELD2 (MARVEL domain containing 2) [NCBI Gene 153562] {aka DFNB49, MARVD2, MRVLDC2, Tric}, PINK1 (PTEN induced kinase 1) [NCBI Gene 65018] {aka BRPK, PARK6}, MALSU1 (mitochondrial assembly of ribosomal large subunit 1) [NCBI Gene 115416] {aka C7orf30, mtRsfA}, HSPD1 (heat shock protein family D (Hsp60) member 1) [NCBI Gene 3329] {aka CPN60, GROEL, HLD4, HSP-60, HSP60, HSP65}, PRKN (parkin RBR E3 ubiquitin protein ligase) [NCBI Gene 5071] {aka AR-JP, LPRS2, PARK2, PDJ}, UBI4 (ubiquitin) [NCBI Gene 850620] {aka SCD2, UB14}, PRPF6 (pre-mRNA processing factor 6) [NCBI Gene 24148] {aka ANT-1, ANT1, C20orf14, Prp6, RP60, SNRNP102}, HSPE1 (heat shock protein family E (Hsp10) member 1) [NCBI Gene 3336] {aka CPN10, EPF, GROES, HSP10}, CDC31 (centrin) [NCBI Gene 854431] {aka DSK1}, GGA1 (ubiquitin-binding protein) [NCBI Gene 851960], GroES [NCBI Gene 13876916], LONP1 (lon peptidase 1, mitochondrial) [NCBI Gene 9361] {aka CODASS, LON, LONP, LonHS, PIM1, PRSS15}
- **Diseases:** hypomyelinating leukodystrophy (MESH:C536319), metastasis (MESH:D009362), hereditary spastic paraplegia (MESH:D015419), tumor (MESH:D009369), Alzheimer's (MESH:D000544), Parkinson's (MESH:D010300), neurodegenerative diseases (MESH:D019636)
- **Chemicals:** 2-mercaptoethanol (MESH:D008623), Hoechst 33342 (MESH:C017807), phenylmethylsulfonyl fluoride (MESH:D010664), penicillin (MESH:D010406), puromycin (MESH:D011691), glycerol (MESH:D005990), K+ (MESH:D011188), chloroacetamide (MESH:C013874), Dulbecco's modified Eagle's medium (-), oligomycin (MESH:D009840), Dimethyl sulfoxide (MESH:D004121), 4',6-diamidino-2-phenylindole (MESH:C007293), polyvinylidene difluoride (MESH:C024865), KCl (MESH:D011189), Tween 20 (MESH:D011136), TBS-T (MESH:C027647), PBS (MESH:D007854), CMXRos (MESH:C107472), Agarose (MESH:D012685), antimycin A (MESH:D000968), sodium pyrophosphate (MESH:C003319), sucrose (MESH:D013395), paraformaldehyde (MESH:C003043), EGTA (MESH:D004533), propane (MESH:D011407), bicinchoninic acid (MESH:C047117), l-glutamine (MESH:D005973), gamitrinib-triphenylphosphonium (MESH:C000626826), ATP (MESH:D000255), streptomycin (MESH:D013307), green (MESH:C024537), polyacrylamide (MESH:C016679), Triton X-100 (MESH:D017830), polyethylenimine (MESH:D011094), EDTA (MESH:D004492), nitrogen (MESH:D009584), NP-40 (MESH:C010615), Ni (MESH:D009532), LDS (MESH:C028913), phosphate (MESH:D010710), NaCl (MESH:D012965), gold (MESH:D006046), platinum (MESH:D010984), MgCl2 (MESH:D015636), SDS (MESH:D012967), magnesium acetate (MESH:C000656591), calcium phosphate (MESH:C020243), sodium fluoride (MESH:D012969), Nucleotides (MESH:D009711), sodium glycerophosphate (MESH:C029620), Water (MESH:D014867), ethane (MESH:D004980)
- **Species:** Homo sapiens (human, species) [taxon 9606], Tobacco etch virus (no rank) [taxon 12227], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Escherichia coli (E. coli, species) [taxon 562]
- **Mutations:** Gly-Ser, C with 10, V72I
- **Cell lines:** HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12959407/full.md

## References

100 references — full list in the complete paper: https://tomesphere.com/paper/PMC12959407/full.md

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Source: https://tomesphere.com/paper/PMC12959407