# Challenges and advances in drug resistance and tolerance in cancer

**Authors:** Trever G Bivona, Itai Yanai, Fabio Calabrò, Fatima Mechta-Grigoriou, Giacomo Corleone, Marta Di Martile, Annalisa Tocci, Piera Tocci, Sebastiano Vaccarella, Marilia Consiglia Ferriero, Andrea Alimonti, Eytan Ruppin, Paola Nisticò, Anna Bagnato, Giovanni Blandino

PMC · DOI: 10.1186/s13046-026-03665-y · Journal of Experimental & Clinical Cancer Research : CR · 2026-03-04

## TL;DR

This paper discusses how cancer cells develop resistance to drugs and how new research is uncovering ways to overcome this challenge through advanced techniques and new therapeutic strategies.

## Contribution

The paper introduces new insights into the mechanisms of drug resistance and tolerance in cancer, emphasizing adaptive processes and ecological interactions within the tumor microenvironment.

## Key findings

- Cancer resistance involves complex interactions between tumor cells and their microenvironment.
- New technologies like single-cell transcriptomics and AI are revealing actionable vulnerabilities in resistant cancers.
- Drug tolerance is a dynamic continuum shaped by evolutionary and ecological factors.

## Abstract

Therapeutic resistance remains the principal barrier to durable clinical benefit in oncology, particularly in oncogene-driven malignancies and immune-refractory tumors. This meeting brought together leading experts to dissect the multifaceted biological mechanisms underlying drug tolerance, adaptive resistance, and immune escape across diverse cancer types. Presentations highlighted how cancer cell-intrinsic plasticity, chromatin reprogramming, and stress-responsive transcriptional networks intersect with tumor microenvironment-derived cues, including inflammatory signaling, stromal heterogeneity, mechanotransduction, and paracrine crosstalk, to sustain drug-tolerant persister states. Novel insights into cancer-associated fibroblast plasticity, spatially organized immunosuppressive niches, secretory autophagy, and senescence-associated programs underscored the dynamic and adaptive nature of resistance. Cutting-edge approaches, including single-cell and spatial transcriptomics, chromatin accessibility profiling, organoid-based co-culture platforms, and artificial intelligence-driven spatial inference, revealed actionable vulnerabilities and predictive biomarkers. Collectively, these studies emphasize that resistance is not a binary phenomenon but a continuum shaped by evolutionary adaptation and ecological interactions within the TME. This report synthesizes the conceptual advances and translational implications emerging from the meeting, outlining new therapeutic strategies aimed at disrupting adaptive tolerance states, reprogramming immunosuppressive niches, and enabling fast, accessible precision oncology.

## Linked entities

- **Diseases:** cancer (MONDO:0004992)

## Full-text entities

- **Genes:** SPP1 (secreted phosphoprotein 1) [NCBI Gene 6696] {aka BNSP, BSPI, ETA-1, OPN}, AR (androgen receptor) [NCBI Gene 367] {aka AIS, AR8, DHTR, HPCX3, HUMARA, HYSP1}, CXCR2 (C-X-C motif chemokine receptor 2) [NCBI Gene 3579] {aka CD182, CDw128b, CMKAR2, IL8R2, IL8RA, IL8RB}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, PIEZO1 (piezo type mechanosensitive ion channel component 1 (Er blood group)) [NCBI Gene 9780] {aka DHS, ER, FAM38A, LMPH3, LMPHM6, Mib}, FOLR2 (folate receptor beta) [NCBI Gene 2350] {aka BETA-HFR, FBP, FBP/PL-1, FR-BETA, FR-P3, FRbeta}, PARP1 (poly(ADP-ribose) polymerase 1) [NCBI Gene 142] {aka ADPRT, ADPRT 1, ADPRT1, ARTD1, PARP, PARP-1}, SPATA2 (spermatogenesis associated 2) [NCBI Gene 9825] {aka PD1, PPP1R145, tamo}, NRF1 (nuclear respiratory factor 1) [NCBI Gene 4899] {aka ALPHA-PAL}, RHOA (ras homolog family member A) [NCBI Gene 387] {aka ARH12, ARHA, EDFAOB, RHO12, RHOH12}, NR3C1 (nuclear receptor subfamily 3 group C member 1) [NCBI Gene 2908] {aka GCCR, GCR, GCRST, GR, GRL}, YAP1 (Yes1 associated transcriptional regulator) [NCBI Gene 10413] {aka COB1, YAP, YAP-1, YAP2, YAP65, YKI}, FOLH1 (folate hydrolase 1) [NCBI Gene 2346] {aka FGCP, FOLH, GCP2, GCPII, NAALAD1, PSM}, EDN1 (endothelin 1) [NCBI Gene 1906] {aka ARCND3, ET1, HDLCQ7, PPET1, QME}, FAP (fibroblast activation protein alpha) [NCBI Gene 2191] {aka DPPIV, FAPA, FAPalpha, SIMP}, IFNA8 (interferon alpha 8) [NCBI Gene 3445] {aka IFN-alphaB}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, KRAS (KRAS proto-oncogene, GTPase) [NCBI Gene 3845] {aka 'C-K-RAS, C-K-RAS, CFC2, K-RAS2A, K-RAS2B, K-RAS4A}, HDAC9 (histone deacetylase 9) [NCBI Gene 9734] {aka HD7, HD7b, HD9, HDAC, HDAC7B, HDAC9B}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, DPP4 (dipeptidyl peptidase 4) [NCBI Gene 1803] {aka ADABP, ADCP2, CD26, DPPIV, TP103}, CTLA4 (cytotoxic T-lymphocyte associated protein 4) [NCBI Gene 1493] {aka ALPS5, CD, CD152, CELIAC3, CTLA-4, GRD4}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, IL23A (interleukin 23 subunit alpha) [NCBI Gene 51561] {aka IL-23, IL-23A, IL23P19, P19, SGRF}, PTK2 (protein tyrosine kinase 2) [NCBI Gene 5747] {aka FADK, FADK 1, FAK, FAK1, FRNK, PPP1R71}, ANTXR1 (ANTXR cell adhesion molecule 1) [NCBI Gene 84168] {aka ATR, GAPO, TEM8}, TEAD4 (TEA domain transcription factor 4) [NCBI Gene 7004] {aka EFTR-2, RTEF1, TCF13L1, TEF-3, TEF3, TEFR-1}, TREM2 (triggering receptor expressed on myeloid cells 2) [NCBI Gene 54209] {aka AD17, PLOSL2, TREM-2, Trem2a, Trem2b, Trem2c}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, F10 (coagulation factor X) [NCBI Gene 2159] {aka FX, FXA}, EDNRA (endothelin receptor type A) [NCBI Gene 1909] {aka ET-A, ETA, ETA-R, ETAR, ETRA, MFDA}, MMRN1 (multimerin 1) [NCBI Gene 22915] {aka ECM, EMILIN4, GPIa*, MMRN}, EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}, JUNB (JunB proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 3726] {aka AP-1}
- **Diseases:** chronic kidney disease (MESH:D051436), MM (MESH:D009101), lung cancer (MESH:D008175), cancer (MESH:D009369), inflammation (MESH:D007249), fibrosis (MESH:D005355), melanoma (MESH:D008545), bladder or prostate cancer (MESH:D011471), NSCLC (MESH:D002289), CRPC (MESH:D064129), muscle infiltrating (MESH:D017254), NMIBC (MESH:D000093284), Marta Di Martile (MESH:D003643), EC (MESH:D016889), SASP (MESH:D008579), urothelial cancer (MESH:D014523), metastasis (MESH:D009362), genito-urinary malignancies (MESH:D014565), Urothelial carcinoma of the bladder (MESH:D001749), invasive (MESH:D009361), prostate tumor (MESH:D011472), TAMs (MESH:D000072716), HG-SOC (MESH:D010051), breast cancer (MESH:D001943)
- **Chemicals:** trastuzumab (MESH:D000068878), abiraterone (MESH:C089740), Platinum (MESH:D010984), oligonucleotides (MESH:D009841), testosterone (MESH:D013739), Bortezomib (MESH:D000069286), ASO (MESH:D016376), Giacomo Corleone (-), calcium (MESH:D002118), macitentan (MESH:C533860), taxanes (MESH:D043823), enzalutamide (MESH:C540278)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12958674/full.md

## References

24 references — full list in the complete paper: https://tomesphere.com/paper/PMC12958674/full.md

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Source: https://tomesphere.com/paper/PMC12958674