# Evaluating the Correlation Between Fecal Microbiota Profiles and Clinical Presentation in Pediatric Patients with Celiac Disease

**Authors:** Nastaran Asri, Mohadeseh Mahmoudi Ghehsareh, Fahimeh Sadat Gholam-Mostafaei, Mehdi Azizmohammad Looha, Hamidreza Houri, Somayeh Jahani-Sherafat, Mohammad Rahmanian, Mostafa Rezaei Tavirani, Mohammad Rostami-Nejad

PMC · DOI: 10.34172/mejdd.2025.428 · Middle East Journal of Digestive Diseases · 2025-07-30

## TL;DR

This study explores how gut bacteria in children with celiac disease relate to their symptoms and genetic factors.

## Contribution

The study identifies specific gut microbiota correlations with clinical symptoms and HLA genotypes in pediatric celiac disease.

## Key findings

- Enterobacteriaceae and Streptococcus are linked to diarrhea in celiac patients.
- Firmicutes and Actinobacteria correlate with weight loss, while Verrucomicrobia inversely correlates with fatigue.
- HLA-DQ2 genotype is positively correlated with Betaproteobacteria and Prevotella.

## Abstract

Celiac disease (CD) is an immune-mediated disorder triggered by gluten in genetically susceptible individuals, often presenting with diverse gastrointestinal and non-gastrointestinal symptoms. Emerging evidence suggests that alterations in gut microbiota composition may influence disease manifestation and clinical outcomes. We investigated the correlation between gut microbiota profiles and clinical features in pediatric patients with CD.

38 pediatric patients (mean age 10.24 years) with confirmed CD were enrolled from August 2021 to September 2022. We had the data on the relative abundance of various fecal microbiota from our previous study, and collected their clinical and demographic data through questionnaires. Genotyping of human leukocyte antigens (HLA)-DQ2 and HLA-DQ8 alleles was performed.

Significant correlations were found between gut microbiota and both gastrointestinal (GI) and non-GI symptoms. Enterobacteriaceae and Streptococcus were positively associated with diarrhea (OR: 5.23 and OR: 3.46), whereas deltaproteobacteria showed a negative correlation (OR: 0.07). Betaproteobacteria and Staphylococcus were linked to vomiting (OR: 0.05 and OR: 12.59). Firmicutes and Actinobacteria correlated with weight loss (OR: 2.73 and OR: 16.21), and Verrucomicrobia inversely correlated with fatigue (OR: 0.36). The prevalent HLA genotype DQ2 was correlated positively with Betaproteobacteria (OR: 14.82) and Prevotella (OR: 5.05), while Veillonella showed a negative correlation with HLA-DQ2 (OR: 0.43).

Overall, the analysis revealed distinct microbiota patterns influenced by symptom presentation and HLA-DQ genotypes, underscoring the need for further research into the therapeutic potential of modifying gut microbiota in managing CD.

## Linked entities

- **Diseases:** celiac disease (MONDO:0005130)
- **Species:** Enterobacteriaceae (taxon 543), Streptococcus (taxon 1301), Deltaproteobacteria (taxon 28221), Betaproteobacteria (taxon 28216), Staphylococcus (taxon 1279), Prevotella (taxon 838), Veillonella (taxon 29465)

## Full-text entities

- **Genes:** HLA-A (major histocompatibility complex, class I, A) [NCBI Gene 3105] {aka HLAA}, TOR1A (torsin family 1 member A) [NCBI Gene 1861] {aka AMC5, DQ2, DYT1}
- **Diseases:** sleep disorders (MESH:D012893), eczema (MESH:D004485), skin afflictions (MESH:D012871), gastroenteritis (MESH:D005759), anemia (MESH:D000740), inflammation (MESH:D007249), gastrointestinal (GI) symptoms (MESH:D012817), rheumatoid arthritis (MESH:D001172), symptoms (MESH:D012816), bone disease (MESH:D001847), weight loss (MESH:D015431), abdominal pain (MESH:D015746), atrophy (MESH:D001284), Klebsiella (MESH:D007710), dysbiosis (MESH:D064806), gastrointestinal disorders (MESH:D005767), opportunistic infections (MESH:D009894), Fatigue (MESH:D005221), II and III (MESH:C536044), diarrhea (MESH:D003967), type 1 diabetes (MESH:D003922), constipation (MESH:D003248), immune-mediated disorder (MESH:C567355), irritable bowel syndrome (MESH:D043183), weight gain (MESH:D015430), thyroid dysfunction (MESH:D013959), autoimmune diseases (MESH:D001327), inflammatory bowel disease (MESH:D015212), depression (MESH:D003866), obese (MESH:D009765), villous atrophy (MESH:C564019), CD (MESH:D002446), small intestinal bacterial overgrowth (MESH:D001765), aphthous stomatitis (MESH:D013281), systemic lupus erythematosus (MESH:D008180), and non- (MESH:C580335), vomiting (MESH:D014839), neurologic disorders (MESH:D009461), bloating (MESH:C535647), chronic fatigue syndrome (MESH:D015673), multiple sclerosis (MESH:D009103), acne (MESH:D000152)
- **Species:** Salmonella (genus) [taxon 590], Escherichia coli (E. coli, species) [taxon 562], Clostridium perfringens (species) [taxon 1502], Streptococcus (genus) [taxon 1301], Klebsiella pneumoniae (species) [taxon 573], Bifidobacterium (genus) [taxon 1678], Lactobacillus (genus) [taxon 1578], Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116], Staphylococcus aureus (species) [taxon 1280], Staphylococcus (genus) [taxon 1279], Prevotella (genus) [taxon 838], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Fusobacterium (genus) [taxon 848], Spirochaetota (phylum) [taxon 203691], Enterobacteriaceae (enterobacteria, family) [taxon 543], Bacillota (clostridial firmicutes, phylum) [taxon 1239], Veillonella (genus) [taxon 29465], Enterobacterales (order) [taxon 91347], gut metagenome (species) [taxon 749906], Ruminococcus (genus) [taxon 1263], Parabacteroides (genus) [taxon 375288], Mycoplasmatota (phylum) [taxon 544448], Bacteroidia (class) [taxon 200643], Actinomycetota (actinobacteria, phylum) [taxon 201174], Enterococcus (genus) [taxon 1350], Enterobacter (genus) [taxon 547]

## Full text

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## Figures

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## References

45 references — full list in the complete paper: https://tomesphere.com/paper/PMC12958314/full.md

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Source: https://tomesphere.com/paper/PMC12958314