# Study of grapevine endophytes’ interaction with the host and their potential as biocontrol agents as sustainable alternative to agrochemicals

**Authors:** Simona Pizzi, Alessandra Di Canito, Elena Palencia Mulero, Carmen Cris De Oliveira Nobre Bezerra, Valentina Ricciardi, Giuliana Maddalena, Evelyn Maluleke, Roberto Carmine Foschino, Silvia Laura Toffolatti, Daniela Fracassetti, Gabriella De Lorenzis, Gustavo Cordero-Bueso, Mathabatha Evodia Setati, Ileana Vigentini

PMC · DOI: 10.3389/fmicb.2026.1758446 · Frontiers in Microbiology · 2026-02-18

## TL;DR

This study explores grapevine endophytes that can fight plant pathogens and tolerate agrochemicals, offering a sustainable alternative to pesticides.

## Contribution

The study identifies specific endophyte strains with strong antagonistic activity and agrochemical tolerance for potential biocontrol applications.

## Key findings

- Aureobasidium pullulans and Bacillus velezensis strains showed significant antagonism against Botrytis cinerea.
- Endophytes tolerated high copper and fungicide concentrations but were sensitive to sulfur dioxide.
- Selected strains reduced pathogen infection in grapevine leaves and modulated plant responses.

## Abstract

In sustainable vineyard management, biocontrol agents (BCAs) offer a promising alternative to chemical pesticides. This study focuses on characterizing endophytes isolated from grapevines in different regions of northern Italy for (i) their effectiveness against Botrytis cinerea through in vitro tests and (ii) their capability to survive in the presence of copper and other commercial fungicides with the final goal of investigating their possible future application for an integrated approach in vineyard. Aureobasidium pullulans strains ED203, ED206, ED217, and ED221 demonstrated significant antagonistic activity toward B. cinerea, while Bacillus velezensis ED163 showed the highest levels of pathogen inhibition. Volatile organic compounds (VOCs) analysis identified three distinct microbial clusters based on BCAs volatile profiles, highlighting the production of antifungal compounds such as alcohols, esters, and terpenes to counteract the pathogen growth. The investigated BCAs showed tolerance to high concentrations of copper (up to 100 mg/L) and the fungicide SWITCH (1 g/L), but they were sensitive to a standard oenological dose of sulfur dioxide (50 mg/L). Finally, in vivo tests on grapevine leaves confirmed the ability of B. velezensis and A. pullulans strains ED203 and ED221 candidates to effectively reduce the mycelium infection on plant tissue standing out as strong candidates for pest management. The interaction between BCAs with the host was confirmed through leaves cell culture use, highlighting the capability of the best candidate selected in the study to modulate plant response in presence of pathogen.

## Linked entities

- **Chemicals:** copper (PubChem CID 23978), sulfur dioxide (PubChem CID 1119)
- **Species:** Vitis vinifera (taxon 29760)

## Full-text entities

- **Genes:** ABC (ABC transporter-like) [NCBI Gene 100232918] {aka VvABCG44, VvPDR14}, VvVal [NCBI Gene 100232955]
- **Diseases:** infection (MESH:D007239), DC (MESH:D009105), fungal (MESH:D009181), necrosis (MESH:D009336), AD (MESH:D000544), cancer (MESH:D009369), gray (MESH:D055652)
- **Chemicals:** boscalid (MESH:C550088), cyclodextrins (MESH:D003505), Cyprodinil (MESH:C108338), 6-Benzylaminopurine (MESH:C480551), CPD (MESH:C007077), 2-nonanol (MESH:C526153), acetone (MESH:D000096), carbohydrates (MESH:D002241), hydrocarbons (MESH:D006838), monoterpenes (MESH:D039821), sabinene (MESH:C035127), methyljasmonate (MESH:C072239), cyclohexene (MESH:C052568), 2,4-D (MESH:D015084), sodium hypochlorite (MESH:D012973), depsipeptides (MESH:D047630), trans-piceid (MESH:C058229), aluminum (MESH:D000535), ethyl acetate (MESH:C007650), 2-furanmethanol (MESH:C012986), 1-hexanol-2-ethyl (MESH:C034017), 2-pentene (-), Fludioxonil (MESH:C108339), helium (MESH:D006371), sulfur (MESH:D013455), sulfurous acid (MESH:D013456), Procure (MESH:D018120), copper sulfate (MESH:D019327), octanoic acid (MESH:C031492), glycerol (MESH:D005990), glutaraldehyde (MESH:D005976), 2-nonanone (MESH:C026636), valencene (MESH:C506706), cadmium (MESH:D002104), alcohols (MESH:D000438), SO2 (MESH:D013458), indole (MESH:C030374), 1-hexanol (MESH:C036260), heavy metal (MESH:D019216), beta-glucans (MESH:D047071), polyphenol (MESH:D059808), pyraclostrobin (MESH:C513428), AP (MESH:D000667), SYBR Green (MESH:C098022), 2-pentanone (MESH:C076402), CO2 (MESH:D002245), sucrose (MESH:D013395), potassium metabisulfite (MESH:C005199), agarose (MESH:D012685), melanin (MESH:D008543), ethidium bromide (MESH:D004996), nickel (MESH:D009532), EDTA (MESH:D004492), benzaldehyde (MESH:C032175), ketones (MESH:D007659), stilbene (MESH:D013267), agar (MESH:D000362), hexadecane (MESH:C007932), esters (MESH:D004952), 1-propanol-2-methyl (MESH:C040507)
- **Species:** Bacillus pumilus (species) [taxon 1408], Alternaria solani (species) [taxon 48100], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Colletotrichum gloeosporioides (species) [taxon 474922], Homo sapiens (human, species) [taxon 9606], Colletotrichum acutatum (species) [taxon 27357], Botrytis cinerea B05.10 (strain) [taxon 332648], Plasmopara viticola (species) [taxon 143451], Aspergillus tubingensis (species) [taxon 5068], P. viticola [taxon 83180], Botrytis cinerea (gray fruit mold, species) [taxon 40559], Vitis (genus) [taxon 3603], Penicillium expansum (species) [taxon 27334], Bacillus amyloliquefaciens (species) [taxon 1390], Crohivirus B (no rank) [taxon 2169854], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Euphorbia esula (leafy spurge, species) [taxon 3993], Bacillus subtilis (species) [taxon 1423], Aureobasidium pullulans (species) [taxon 5580], Vitis vinifera (wine grape, species) [taxon 29760], Penicillium digitatum (species) [taxon 36651], Bacillus sp. (in: firmicutes) (species) [taxon 1409], Fouquieria splendens (ocotillo, species) [taxon 13533], Babesia sp. CA (species) [taxon 368020], Bacillus licheniformis (species) [taxon 1402], Serratia liquefaciens (species) [taxon 614]
- **Cell lines:** V. sylvestris — Homo sapiens (Human), Embryonic stem cell (CVCL_ZJ91), ED163 — Mus musculus (Mouse), Hybridoma (CVCL_M036), B05.10 — Homo sapiens (Human), Melanoma, Cancer cell line (CVCL_W876), UCA 992 — Homo sapiens (Human), Transformed cell line (CVCL_1M77)

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12957226/full.md

## References

71 references — full list in the complete paper: https://tomesphere.com/paper/PMC12957226/full.md

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Source: https://tomesphere.com/paper/PMC12957226