# Differential antiviral effects and immune responses in nasal and airway organoid during RSV infection: implications for interferon therapy

**Authors:** Linmei Wang, Lina Chen, Lin Yang, Yanan Hu, Danli Lu, You Duan, Li Qiu, Yan Li, Rui Zhang, Hanmin Liu, Wenhao Yang

PMC · DOI: 10.3389/fimmu.2026.1754206 · Frontiers in Immunology · 2026-02-18

## TL;DR

This study explores how different interferons affect RSV infection in nasal and airway organoids, offering insights into better antiviral therapies.

## Contribution

The study reveals distinct antiviral and anti-inflammatory effects of type I and III interferons in nasal versus airway organoids during RSV infection.

## Key findings

- Type I and III interferons reduce RSV viral load and inflammation in organoids.
- Nasal epithelium shows a stronger immune response compared to airway epithelium.
- IFN-λ1 is most effective in nasal epithelium, while IFN-β does not worsen inflammation in airway epithelium.

## Abstract

Respiratory syncytial virus (RSV) is a leading cause of lower respiratory tract infections in infants and young children, and it constitutes a significant risk factor for the development of bronchiolitis and subsequent childhood asthma. The severity of the disease is notably higher in infants compared to adults, underscoring the urgent need for effective therapeutic interventions.

In our study, we utilized pediatric nasal and airway epithelial organoids to demonstrate that both type I and type III interferons (IFNs) markedly reduce viral load and downregulate key inflammatory mediators, including IL-6, CXCL8, IL-1α, and TNF, during RSV infection. Through transcriptome Sequencing and multiplex cytokine profiling of 46 immune mediators, we observed a more robust immune response in the nasal epithelium compared to the airway epithelium.

Notably, IFN-λ1 was most effective in suppressing inflammation in the nasal epithelium, whereas IFN-β did not exacerbate inflammatory responses in the airway epithelium.

These findings provide novel insights for optimizing clinical IFN therapy, particularly in terms of selecting the appropriate interferon type, delivery site, and dosing strategy.

## Linked entities

- **Proteins:** IL6 (interleukin 6), CXCL8 (C-X-C motif chemokine ligand 8), IL1A (interleukin 1 alpha), TNF (tumor necrosis factor), IFNL1 (interferon lambda 1), IFNB1 (interferon beta 1)
- **Diseases:** bronchiolitis (MONDO:0002465), asthma (MONDO:0004979)

## Full-text entities

- **Genes:** C1R (complement C1r) [NCBI Gene 715] {aka EDS8, EDSPD1}, GBP3 (guanylate binding protein 3) [NCBI Gene 2635], TLR8 (toll like receptor 8) [NCBI Gene 51311] {aka CD288, IMD98, TLR-8, hTLR8}, FOSB (FosB proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 2354] {aka AP-1, G0S3, GOS3, GOSB}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, HLA-C (major histocompatibility complex, class I, C) [NCBI Gene 3107] {aka D6S204, HLA-JY3, HLAC, HLC-C, MHC, PSORS1}, CCL2 (C-C motif chemokine ligand 2) [NCBI Gene 6347] {aka GDCF-2, HC11, HSMCR30, MCAF, MCP-1, MCP1}, MAVS (mitochondrial antiviral signaling protein) [NCBI Gene 57506] {aka CARDIF, IPS-1, IPS1, VISA}, CSF2 (colony stimulating factor 2) [NCBI Gene 1437] {aka CSF, GMCSF}, TRIM63 (tripartite motif containing 63) [NCBI Gene 84676] {aka CMH31, IRF, MURF1, MURF2, RNF28, SMRZ}, DHX58 (DExH-box helicase 58) [NCBI Gene 79132] {aka D11LGP2, D11lgp2e, LGP2, RLR-3}, NOD2 (nucleotide binding oligomerization domain containing 2) [NCBI Gene 64127] {aka ACUG, BLAU, BLAUS, CARD15, CD, CLR16.3}, C1QA (complement C1q A chain) [NCBI Gene 712] {aka C1QD1}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, RSPO1 (R-spondin 1) [NCBI Gene 284654] {aka CRISTIN3, RSPO}, GBP2 (guanylate binding protein 2) [NCBI Gene 2634], CXCL10 (C-X-C motif chemokine ligand 10) [NCBI Gene 3627] {aka C7, IFI10, INP10, IP-10, SCYB10, crg-2}, IL17A (interleukin 17A) [NCBI Gene 3605] {aka CTLA-8, CTLA8, IL-17, IL-17A, IL17, ILA17}, IL3 (interleukin 3) [NCBI Gene 3562] {aka IL-3, MCGF, MULTI-CSF}, MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318] {aka CLG4B, GELB, MANDP2, MMP-9}, FGF10 (fibroblast growth factor 10) [NCBI Gene 2255] {aka LADD3}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, TLR4 (toll like receptor 4) [NCBI Gene 7099] {aka ARMD10, CD284, TLR-4, TOLL}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, TNFSF10 (TNF superfamily member 10) [NCBI Gene 8743] {aka APO2L, Apo-2L, CD253, TANCR, TL2, TNLG6A}, NOG (noggin) [NCBI Gene 9241] {aka SYM1, SYNS1, SYNS1A}, IL1A (interleukin 1 alpha) [NCBI Gene 3552] {aka IL-1 alpha, IL-1A, IL1, IL1-ALPHA, IL1F1}, IFNL2 (interferon lambda 2) [NCBI Gene 282616] {aka IFNL2a, IFNL3a, IL-28A, IL28A}, CCL19 (C-C motif chemokine ligand 19) [NCBI Gene 6363] {aka CKb11, ELC, MIP-3b, MIP3B, SCYA19}, TLR2 (toll like receptor 2) [NCBI Gene 7097] {aka CD282, TIL4}, IRF3 (interferon regulatory factor 3) [NCBI Gene 3661] {aka IIAE7}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, RIGI (RNA sensor RIG-I) [NCBI Gene 23586] {aka DDX58, RIG-I, RIG1, RLR-1, SGMRT2}, IFIH1 (interferon induced with helicase C domain 1) [NCBI Gene 64135] {aka AGS7, Hlcd, IDDM19, IMD95, MDA-5, MDA5}, CSF3 (colony stimulating factor 3) [NCBI Gene 1440] {aka C17orf33, CSF3OS, GCSF}, IL10 (interleukin 10) [NCBI Gene 3586] {aka CSIF, GVHDS, IL-10, IL10A, TGIF}, CXCL1 (C-X-C motif chemokine ligand 1) [NCBI Gene 2919] {aka FSP, GRO1, GROa, MGSA, MGSA-a, NAP-3}, TLR6 (toll like receptor 6) [NCBI Gene 10333] {aka CD286}, TP63 (tumor protein p63) [NCBI Gene 8626] {aka AIS, B(p51A), B(p51B), EEC3, KET, LMS}, IFNB1 (interferon beta 1) [NCBI Gene 3456] {aka IFB, IFF, IFN-beta, IFNB}, TGFA (transforming growth factor alpha) [NCBI Gene 7039] {aka TFGA}, LTA (lymphotoxin alpha) [NCBI Gene 4049] {aka LT, TNFB, TNFSF1, TNLG1E}, GZMB (granzyme B) [NCBI Gene 3002] {aka C11, CCPI, CGL-1, CGL1, CSP-B, CSPB}, CCL4 (C-C motif chemokine ligand 4) [NCBI Gene 6351] {aka ACT2, AT744.1, G-26, HC21, LAG-1, LAG1}, IL11 (interleukin 11) [NCBI Gene 3589] {aka AGIF, IL-11}, CCL20 (C-C motif chemokine ligand 20) [NCBI Gene 6364] {aka CKb4, Exodus, LARC, MIP-3-alpha, MIP-3a, MIP3A}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, PLAAT4 (phospholipase A and acyltransferase 4) [NCBI Gene 5920] {aka HRASLS4, HRSL4, PLA1/2-3, PLAAT-4, RARRES3, RIG1}, CD40LG (CD40 ligand) [NCBI Gene 959] {aka CD154, CD40L, HIGM1, IGM, IMD3, T-BAM}, TICAM1 (TIR domain containing adaptor molecule 1) [NCBI Gene 148022] {aka IIAE6, MyD88-3, PRVTIRB, TICAM-1, TRIF}, CCL3 (C-C motif chemokine ligand 3) [NCBI Gene 6348] {aka G0S19-1, LD78, LD78ALPHA, MIP-1-alpha, MIP1A, SCI}, EGF (epidermal growth factor) [NCBI Gene 1950] {aka HOMG4, URG}, IFNA1 (interferon alpha 1) [NCBI Gene 3439] {aka IFL, IFN, IFN-ALPHA, IFN-alphaD, IFNA13, IFNA@}, HLA-A (major histocompatibility complex, class I, A) [NCBI Gene 3105] {aka HLAA}, TLR7 (toll like receptor 7) [NCBI Gene 51284] {aka IMD74, SLEB17, TLR7-like}, IFNL3 (interferon lambda 3) [NCBI Gene 282617] {aka IFN-lambda-3, IFN-lambda-4, IL-28B, IL-28C, IL28B, IL28C}, IL4 (interleukin 4) [NCBI Gene 3565] {aka BCGF-1, BCGF1, BSF-1, BSF1, IL-4}, RAP1A (RAP1A, member of RAS oncogene family) [NCBI Gene 5906] {aka C21KG, G-22K, KREV-1, KREV1, RAP1, SMGP21}, IFNL1 (interferon lambda 1) [NCBI Gene 282618] {aka IL-29, IL29}, CCL5 (C-C motif chemokine ligand 5) [NCBI Gene 6352] {aka D17S136E, RANTES, SCYA5, SIS-delta, SISd, TCP228}
- **Diseases:** COVID-19 (MESH:D000086382), RSV (MESH:D018357), Infection (MESH:D007239), congenital heart disease (MESH:D006330), rhinovirus B (MESH:D006509), asthma (MESH:D001249), fibrosis (MESH:D005355), HL (MESH:C538324), respiratory infections (MESH:D012141), Inflammatory (MESH:D007249), Viral infection (MESH:D014777), influenza infection (MESH:D007251), respiratory tract illness (MESH:D012140), hyperplasia (MESH:D006965), RSV bronchiolitis (MESH:D001988), AO (MESH:D000402), sepsis (MESH:D018805), wheezing (MESH:D012135), PCD (MESH:D002925), lung inflammation (MESH:D011014), allergic (MESH:D004342), COPD (MESH:D029424)
- **Chemicals:** EDTA (MESH:D004492), Poly(I:C) (MESH:D011070), SB202190 (MESH:C090942), nitrogen (MESH:D009584), Nirsevimab (MESH:C000709769), dUTP (MESH:C027078), DPBS (MESH:C012939), Alexa Fluor 488 (MESH:C000711379), Y27632 (MESH:C108830), A-8301 (-), paraffin (MESH:D010232), HEPES (MESH:D006531), N-acetylcysteine (MESH:D000111), palivizumab (MESH:D000069455), PBS (MESH:D007854), GlutaMAX (MESH:C054122), nicotinamide (MESH:D009536), CO2 (MESH:D002245), water (MESH:D014867), TRIzol (MESH:C411644), LPS (MESH:D008070), paraformaldehyde (MESH:C003043)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606], Respiratory syncytial virus (no rank) [taxon 12814]
- **Mutations:** Thr399Ile, Asp299Gly, C-159T
- **Cell lines:** HEp-2 — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_1906)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12957070/full.md

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12957070/full.md

## References

67 references — full list in the complete paper: https://tomesphere.com/paper/PMC12957070/full.md

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Source: https://tomesphere.com/paper/PMC12957070