# Framework-mediated binding of foreign and self-glycans by IGHV4–34 antibodies

**Authors:** David B. Langley, Christopher J. Jara, Jake Y. Henry, Joanne H. Reed, Christopher C. Goodnow, Daniel Christ

PMC · DOI: 10.3389/fimmu.2026.1767837 · Frontiers in Immunology · 2026-02-18

## TL;DR

This paper explains how IGHV4–34 antibodies bind to glycans in both cold agglutinin disease and HIV, using a unique hydrophobic patch in their framework region.

## Contribution

The study provides structural insights into how the FR1 patch of IGHV4–34 antibodies directly binds glycans, offering a new mechanistic understanding.

## Key findings

- Structures show the FR1 patch of IGHV4–34 antibodies binds high mannose glycans on HIV.
- The FR1 patch engages glycans in a non-CDR mode, suggesting a mechanism for self-antigen binding in cold agglutinin disease.
- Stereochemical similarities between HIV glycans and LacNAc support a conserved binding mechanism.

## Abstract

Cold agglutinin disease is an autoimmune condition characterised by expression of self-reactive antibodies to I/i carbohydrate blood group antigens (polymers of N-acetyllactosamine or ‘LacNAc’ units) resulting in anaemia through the agglutination and complement-mediated destruction of red blood cells. This antibody response is dominated by antibodies of the human IGHV4–34 germline, which display a unique hydrophobic patch formed by germline-encoded tryptophan and tyrosine residues at positions 7 and 25 within framework 1 (FR1). Although the requirement for conservation of this FR1 patch for binding to the I/i carbohydrate antigen has been well established, structural insights regarding the mechanistic role of the FR1 patch have remained elusive. Intriguingly, recent papers describing IGHV4–34 antibodies bound to the glycan-adorned surface of the HIV envelope glycoprotein shed light on the utility of this FR1 surface. Rather than indirectly shaping the conformation of the conventional antigen binding site as previously proposed, the structures reveal direct interfaces between the hydrophobic FR1 patch and high mannose glycans projected by HIV. Given the stereochemical similarities between these glycans and LacNAc, these structures suggest how I/i self-antigen glycans might be similarly engaged by IGHV4–34 antibodies in a framework-centric non-CDR mode and provide a rationale for the preservation of this otherwise self-reactive antibody germline.

## Linked entities

- **Genes:** IGHV4-34 (immunoglobulin heavy variable 4-34) [NCBI Gene 28395]
- **Chemicals:** N-acetyllactosamine (PubChem CID 439271), LacNAc (PubChem CID 9800166)
- **Diseases:** cold agglutinin disease (MONDO:0018922)

## Full-text entities

- **Genes:** LOC102723407 (immunoglobulin heavy variable 4-38-2-like) [NCBI Gene 102723407] {aka IGHV4, IGHV4-30, IGHV4-38-2, IGHV4-39, IGHV4-b, IGVH4-39}, Akr1b8 (aldo-keto reductase family 1, member B8) [NCBI Gene 14187] {aka FR-1, Fgfrp, Fgrp}, ITIH4 (inter-alpha-trypsin inhibitor heavy chain 4) [NCBI Gene 3700] {aka GP120, H4P, IHRP, ITI-HC4, ITIHL1, PK-120}, CTNND1 (catenin delta 1) [NCBI Gene 1500] {aka BCDS2, CAS, CTNND, P120CAS, P120CTN, p120}, IGHV4-34 (immunoglobulin heavy variable 4-34) [NCBI Gene 28395] {aka IGHV434, VH}, GCNA (germ cell nuclear acidic peptidase) [NCBI Gene 93953] {aka ACRC, NAAR1, SPGFX4}, IGKV2D-19 (immunoglobulin kappa variable 2D-19 (pseudogene)) [NCBI Gene 28887] {aka A12, IGKV2D19}, IGHV1-69 (immunoglobulin heavy variable 1-69) [NCBI Gene 28461] {aka IGHV1-E, IGHV169, IGHV1E}, ERVK-20 (endogenous retrovirus group K member 20) [NCBI Gene 100616444] {aka c11_B, env}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, S (surface glycoprotein) [NCBI Gene 43740568] {aka spike glycoprotein}
- **Diseases:** RF (MESH:D001171), cryoglobulinemia (MESH:D003449), infection (MESH:D007239), lymphoproliferative autoimmune disorder (MESH:D056735), Cancer (MESH:D009369), COVID19 (MESH:D000086382), influenza (MESH:D007251), MERS (MESH:D018352), CAD (MESH:D000744), vasculitis (MESH:D014657), rheumatoid arthritis (MESH:D001172), SLE (MESH:D008180), HIV infection (MESH:D015658), anaemia (MESH:D000743), autoimmune condition (MESH:D001327)
- **Chemicals:** Carbohydrates (MESH:D002241), GlcNAc (MESH:D000117), carbon (MESH:D002244), Glycan (MESH:D011134), amino acid (MESH:D000596), N (MESH:D009584), sugar (MESH:D000073893), oxygen (MESH:D010100), N-acetyllactosamine (MESH:C000458), -6-linked glucosamine disaccharide (-), H77 (MESH:C034503), Man (MESH:D008358), sulphur (MESH:D013455), Asn (MESH:D001216), lipid-A (MESH:D008050), indole (MESH:C030374), glucose (MESH:D005947), CH103 (MESH:C014893), glycolipids (MESH:D006017), hydrogen (MESH:D006859), Tryptophan (MESH:D014364), disaccharide (MESH:D004187), Gal (MESH:C101993), I/ (MESH:D007455), phospholipids (MESH:D010743), imidazole (MESH:C029899), tyrosine (MESH:D014443), cardiolipin (MESH:D002308)
- **Species:** Trichoderma (genus) [taxon 5543], Homo sapiens (human, species) [taxon 9606], Mycoplasmoides pneumoniae (Filterable agent of primary atypical pneumonia, species) [taxon 2104], Ebola virus [taxon 186536], human gammaherpesvirus 4 (Epstein Barr virus, no rank) [taxon 10376], Rattus norvegicus (brown rat, species) [taxon 10116], Mus musculus (house mouse, species) [taxon 10090], hepatitis C [taxon 11103], Macaca mulatta (rhesus macaque, species) [taxon 9544], Orthopoxvirus vaccinia (species) [taxon 10245], Lassa virus [taxon 11620], Human immunodeficiency virus 1 (no rank) [taxon 11676], Streptococcus gordonii (species) [taxon 1302], Variola virus (smallpox virus, no rank) [taxon 10255], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049]
- **Mutations:** N88, Y25S, N88A, N295A, Y25N, tyrosine residues at positions 7, tryptophan (W) at position 7, Y25, N295, glutamate residue in position 6, tyrosine residues at positions 7

## Full text

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## Figures

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## References

99 references — full list in the complete paper: https://tomesphere.com/paper/PMC12956792/full.md

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Source: https://tomesphere.com/paper/PMC12956792