# Single-cell sequencing reveals reversible glial remodeling in the visual cortex during visual deprivation and recovery

**Authors:** Xiaoqi Gong, Jiaojiao Feng, Zhe Xu, Yunxiao Xie, Yibo Han, Jing Li, Guodong Tang, Yuxi Liu, Xiaoyun Dong, Shuhan Li, Jun Zhang, Junru Wang, Runxun Liu, Jike Song, Hongsheng Bi

PMC · DOI: 10.3389/fimmu.2026.1730619 · Frontiers in Immunology · 2026-02-18

## TL;DR

This study shows that visual deprivation causes changes in brain support cells, but these changes can be reversed when vision is restored.

## Contribution

The study reveals reversible glial remodeling in the visual cortex during visual deprivation and recovery using single-cell sequencing.

## Key findings

- Visual deprivation causes pro-inflammatory changes in microglia and reduces oligodendrocyte numbers.
- Recovery reverses these changes, restoring myelin and reducing inflammation.
- Microglia-oligodendrocyte communication is a key mechanism in cortical plasticity during myopia.

## Abstract

The visual cortex exhibits remarkable experience-dependent plasticity, which can be profoundly disrupted by abnormal visual input. Form-deprivation myopia (FDM) is a well-established model for studying ocular growth; however, the specific responses and functional roles of non-neuronal cells in the visual cortex during both deprivation and recovery remain poorly understood. This study aimed to comprehensively characterize the dynamic alterations in these cells across the course of deprivation and subsequent visual restoration.

We employed single-cell RNA sequencing (scRNA-seq) to delineate the transcriptomic landscape of the primary visual cortex (V1) in a guinea pig model. Two-week-old animals were assigned to three groups: normal control (NC), form-deprivation (FDM; 5 weeks of monocular deprivation), and recovery (REC; 4 weeks of deprivation followed by 1 week of restored vision). Key findings were validated using immunofluorescence, quantitative PCR, Western blotting, and transmission electron microscopy. Bioinformatic analyses, including trajectory inference and cell-cell communication mapping, were performed to elucidate cellular dynamics and interactions.

Visual deprivation induced a pronounced pro-inflammatory transformation in microglia compared with the NC group, characterized by significant upregulation of immune-related pathways such as IL-17, TNF-α, and Toll-like receptor signaling. Concurrently, oligodendrocyte numbers were markedly reduced in the FDM group, accompanied by myelin deficits and downregulation of the key transcription factor Zbtb16. Trajectory analysis revealed a blockade in oligodendrocyte differentiation, while intercellular communication analysis indicated enhanced inflammatory signaling from microglia to oligodendrocyte precursors. Notably, the recovery phase largely reversed these alterations: microglial inflammation was substantially attenuated, the expression of myelin-related genes such as Plp1 was restored, oligodendrocyte numbers and myelin integrity were restored to near-control levels, and the differentiation blockade was resolved.

This study demonstrates that non-neuronal cells in the visual cortex, which include microglia and oligodendrocytes, undergo extensive yet reversible reprogramming in response to changes in visual input. These findings highlight a dynamic microglia–oligodendrocyte axis as a critical cellular mechanism underlying cortical plasticity in myopia, suggesting potential molecular targets for visual rehabilitation strategies.

## Linked entities

- **Genes:** ZBTB16 (zinc finger and BTB domain containing 16) [NCBI Gene 7704], PLP1 (proteolipid protein 1) [NCBI Gene 5354]
- **Proteins:** IL17A (interleukin 17A), TNF (tumor necrosis factor)
- **Diseases:** myopia (MONDO:0001384)

## Full-text entities

- **Genes:** Mbp [NCBI Gene 100731253], TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, ITPA [NCBI Gene 100718887], ZFP36 [NCBI Gene 100733110], beta-actin [NCBI Gene 100135470], Mag [NCBI Gene 100735905], Zbtb16 (zinc finger and BTB domain containing 16) [NCBI Gene 235320] {aka PLZF, Zfp145, lu}, Plp1 [NCBI Gene 100714212], Myt1 [NCBI Gene 100726615], IL-1beta [NCBI Gene 100135556], Mog [NCBI Gene 100714985], Zbtb16 [NCBI Gene 100732029], TNF [NCBI Gene 100135630], ZBTB16 (zinc finger and BTB domain containing 16) [NCBI Gene 7704] {aka PLZF, ZNF145}
- **Diseases:** myopia (MESH:D009216), form (MESH:C565541), visual (MESH:D014786), pain (MESH:D010146), hypomyelination (MESH:D003711), inflammation (MESH:D007249), mydriasis (MESH:D015878), axial elongation (MESH:C537791), overdose (MESH:D062787), Eye Disease (MESH:D005128), cortical dysfunction (MESH:D054220), REC (MESH:D055191), cataract (MESH:D002386), corneal opacity (MESH:D003318), Deprivation Myopia (MESH:D012892), sensory (MESH:D009477)
- **Chemicals:** pentobarbital sodium (MESH:D010424), acetone (MESH:D000096), Alexa Fluor 488 (MESH:C000711379), Triton X-100 (MESH:D017830), uranyl acetate (MESH:C005460), tropicamide (MESH:D014331), osmium tetroxide (MESH:D009993), phosphate (MESH:D010710), oxybuprocaine hydrochloride (MESH:C005298), EMBed 812 resin (-), DAPI (MESH:C007293), ethanol (MESH:D000431), glutamate (MESH:D018698), copper (MESH:D003300), PB (MESH:D007854), Trizol (MESH:C411644), sucrose (MESH:D013395), PFA (MESH:C003043), lipid (MESH:D008055), lipopolysaccharide (MESH:D008070), SYBR Green (MESH:C098022), water (MESH:D014867)
- **Species:** Felis catus (cat, species) [taxon 9685], Mus musculus (house mouse, species) [taxon 10090], Cavia porcellus (domestic guinea pig, species) [taxon 10141]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12956521/full.md

## References

47 references — full list in the complete paper: https://tomesphere.com/paper/PMC12956521/full.md

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Source: https://tomesphere.com/paper/PMC12956521