Correction: Distinct Distal Gut Microbiome Diversity and Composition in Healthy Children from Bangladesh and the United States
Audrie Lin, Elisabeth M. Bik, Elizabeth K. Costello, Les Dethlefsen, Rashidul Haque, David A. Relman, Upinder Singh
Abstract
Genes, proteins, chemicals, diseases, species, mutations and cell lines named across the full text — each resolved to its canonical identifier and authoritative record.
Click any figure to enlarge with its caption.
Figure 1Peer Reviews
No public reviews on file for this paper yet. If you reviewed it on a platform where reviews are public (OpenReview, ICLR, NeurIPS, ICML), you can paste yours below so the community can read it here.
Videos
No videos yet. Explain this paper in a talk, walkthrough, or lecture? Add one.
Taxonomy
TopicsGut microbiota and health · Oral microbiology and periodontitis research · Infant Nutrition and Health
After this article [1] was published, the following errors were identified in Fig 6. Specifically,
Corresponding author DAR stated that the discontinuous line is an artifact that arose during production of the heatmap and does not represent data. The original, manually curated genus-level data file associated with the Fig 6 heatmap is provided here as S1 Data. In the corrected version of Fig 6, the two Lactobacillus rows in S1 Data were summed prior to visualization, producing a single genus-level row that reflects the total Lactobacillus relative abundance (S2 Data). To replicate the visualization approach in Fig 6 in [1] as closely as possible, the data in S2 Data were replotted using the classic TreeView software (Eisen Lab, version 1.60). An updated version of Fig 6 generated directly from S2 Data is provided below. DAR stated that the corrected Fig 6 exhibits the same overall trends and patterns as the original Fig 6 in [1].
The original underlying sequence data to support all results in [1] remain available from the NCBI Short Read Archive under accession SRA057705 (https://www.ncbi.nlm.nih.gov/sra/?term=SRA057705). The Supporting Information files published with [1] continue to be available at Figshare (https://figshare.com/articles/dataset/Distinct_Distal_Gut_Microbiome_Diversity_and_Composition_in_Healthy_Children_from_Bangladesh_and_the_United_States__/154033). The corrected Fig 6 and both the original and corrected data that are the basis for Fig 6 (S1 and S2 Data) are also available at the Stanford Digital Repository (https://purl.stanford.edu/vz702jd4938).
Supporting information
S1 DataOriginal data underlying the heatmap presented in the uncorrected Fig 6.(XLS)
S2 DataOriginal data underlying the corrected heatmap in the updated Fig 6, showing the combined Lactobacillus relative abundance.(XLS)
The reference list from the paper itself. Each links out to its DOI / PubMed record.