# In vivo inhibition of JAK-STAT signalling enhances high pathogenicity influenza virus replication in ducks

**Authors:** Juliette Gross, Bertille Pouget, Margot Sarrat, Charlotte Foret-Lucas, Sébastien Mathieu Soubies, Céline Bleuart, Nicolas Gaide, Romain Volmer, Pierre Bessière

PMC · DOI: 10.1099/jgv.0.002238 · The Journal of General Virology · 2026-03-02

## TL;DR

Blocking a key immune pathway in ducks infected with a deadly bird flu virus increases virus replication without worsening symptoms.

## Contribution

First demonstration that ruxolitinib inhibits antiviral immunity in birds, increasing HPAIV replication.

## Key findings

- Ruxolitinib reduced IFN-stimulated gene expression in duck lungs.
- Viral shedding peaked earlier and viral RNA levels increased in treated ducks.
- No increase in clinical signs was observed despite higher viral replication.

## Abstract

While rapid death is the usual outcome of high pathogenicity avian influenza virus (HPAIV) infection in gallinaceous poultry, HPAIV-infected ducks usually present milder clinical signs and shed virus for a prolonged time. The difference in disease severity has been linked to a more rapid type I IFN immune response and reduced proinflammatory cytokine expression in ducks compared to chickens. To investigate the role of the early antiviral innate immune response in controlling viral replication in ducks, we evaluated the effects of ruxolitinib, a Janus kinase–signal transducer and activator of transcription (JAK–STAT) pathway inhibitor known to dampen IFN signalling in mammals. We first optimized a treatment protocol in 2-week-old ducklings and showed that repeated intracoelomic injections of ruxolitinib significantly decreased IFN-stimulated gene (ISG) mRNA levels in the lung, while oral administration was ineffective. In subsequent infection experiments with an H5N9 HPAIV strain, ruxolitinib treatment led to an earlier peak of viral shedding and increased viral RNA levels in respiratory tissues, which however was not associated with increased expression of clinical signs. Analysis of host immune gene expression in the respiratory tract confirmed a transient suppression of ISG expression coincident with ruxolitinib treatment, followed by a recovery once treatment was ceased. This work provides the first demonstration of the effectiveness of ruxolitinib at inhibiting the antiviral innate immune response in birds, causing increased levels of virus replication when administered to HPAIV-infected ducks.

## Linked entities

- **Chemicals:** ruxolitinib (PubChem CID 17754772)

## Full-text entities

- **Genes:** GAPDH [NCBI Gene 101803965], OAS [NCBI Gene 101800895]
- **Diseases:** necrosis (MESH:D009336), viral infection (MESH:D014777), death (MESH:D003643), H5N9 infection (MESH:D007239), coelomic effusion (MESH:D000080324), bronchointerstitial pneumonia (MESH:D011014), tissue lesions (MESH:D009383), respiratory lesions (MESH:D012140), influenza (MESH:D007251), H5N9 HPAIV infection (MESH:D005585), inflammation (MESH:D007249), atrophy (MESH:D001284), tracheitis (MESH:D014136), neurological involvement (MESH:C538190), pulmonary parenchymal (MESH:D008171), lymphoid hyperplasia (MESH:D019310)
- **Chemicals:** SYBR  Green (MESH:C098022), Gd (MESH:D005682), DMSO (MESH:D004121), formalin (MESH:D005557), Tween-80 (MESH:D011136), PBS (MESH:D007854), eosin (MESH:D004801), haematoxylin (MESH:D006416), penicillin (MESH:D010406), H&amp;E (MESH:D006371), castor oil (MESH:D002368), NI- (-), TRIzol (MESH:C411644), ethanol (MESH:D000431), Ruxolitinib (MESH:C540383), NaCl (MESH:D012965), paraffin (MESH:D010232), streptomycin (MESH:D013307), PEG (MESH:D011092), Poly(I:C) (MESH:D011070)
- **Species:** unidentified influenza virus (species) [taxon 11309], Gallus gallus (bantam, species) [taxon 9031], H5N9 subtype (serotype) [taxon 140020], Hepatovirus A (no rank) [taxon 12092], Homo sapiens (human, species) [taxon 9606], Anas platyrhynchos (duck, species) [taxon 8839], Numididae sp. (species) [taxon 8997], Mus musculus (house mouse, species) [taxon 10090]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12952537/full.md

## References

34 references — full list in the complete paper: https://tomesphere.com/paper/PMC12952537/full.md

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Source: https://tomesphere.com/paper/PMC12952537