# The first complete chloroplast genome sequence and phylogenetic analysis of Actinidia trichogyna

**Authors:** Sen Meng, Zheng Jiang, Jingwen Huang, Xiaohong Yao

PMC · DOI: 10.1080/23802359.2026.2635831 · Mitochondrial DNA. Part B, Resources · 2026-02-27

## TL;DR

This paper presents the first complete chloroplast genome of Actinidia trichogyna and explores its evolutionary relationships.

## Contribution

The study provides the first complete chloroplast genome sequence of Actinidia trichogyna and its phylogenetic analysis.

## Key findings

- The chloroplast genome is 156,507 bp long with 131 annotated genes.
- Phylogenetic analysis shows Actinidia trichogyna forms an independent evolutionary branch.
- The findings offer new genomic resources for kiwifruit research.

## Abstract

Actinidia trichogyna is primarily distributed in the high-altitude regions of southwest China and its genomic data resources are still lacking. In this study, we assembled and annotated its complete chloroplast genome, which spanned 156,507 bp and consisted of a large single-copy region of 88,295 bp, a small single-copy region of 20,610 bp and two inverted repeat regions of 23,801 bp. The genome contained 131 genes, including 84 protein-coding genes, 8 ribosomal RNA genes, and 39 transfer RNA genes. Phylogenetic analysis revealed that it formed an independent branch to other species in the Sect. Maculatae, suggesting its unique evolutionary history. This study provides valuable data resources for kiwifruit evolutionary and functional genomic studies.

## Linked entities

- **Species:** Actinidia trichogyna (taxon 3382280)

## Full-text entities

- **Genes:** atpF [NCBI Gene 23764099], rps16 [NCBI Gene 23764095], ycf1 [NCBI Gene 23764169], ndhB [NCBI Gene 23764158], rpl2 [NCBI Gene 23764152], rpl16 [NCBI Gene 23764148], rpoC1 [NCBI Gene 23764104], petB [NCBI Gene 23764140], ndhA [NCBI Gene 23764166], rps12 [NCBI Gene 23764137], ycf3 [NCBI Gene 23764114], petD [NCBI Gene 23764141]
- **Diseases:** deliciosa NC_026691.1 (OMIM:617025)
- **Chemicals:** Ser (MESH:D012694), CPGAVAS2 (-), silica (MESH:D012822), vitamin C (MESH:D001205)
- **Species:** Actinidia melliana (species) [taxon 165714], Actinidia indochinensis (species) [taxon 165709], Clostridium sp. ATCC 29733 (species) [taxon 1507], Actinidia glaucocallosa (species) [taxon 1286519], Actinidia kolomikta (miyama-mata-tabi, species) [taxon 165710], Actinidia valvata (species) [taxon 165719], Actinidia arguta var. giraldii (varietas) [taxon 1837143], Actinidia rubus (species) [taxon 2781649], Actinidia hubeiensis (species) [taxon 222502], Actinidia polygama (species) [taxon 64480], Actinidia deliciosa (Chinese gooseberry, species) [taxon 3627], Actinidia rufa (nashi-kazura, species) [taxon 165716], Actinidia arguta (species) [taxon 64478], Actinidia suberifolia (species) [taxon 1286524], Amana erythronioides (species) [taxon 241767], Actinidia styracifolia (species) [taxon 165718], Actinidia eriantha (species) [taxon 165200], Actinidia chinensis (golden kiwifruit, species) [taxon 3625]
- **Cell lines:** MN326319.1 — Mus musculus (Mouse), Hybrid cell line (CVCL_U508), NC_026690 — Homo sapiens (Human), Transformed cell line (CVCL_1874)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12951675/full.md

## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12951675/full.md

## References

38 references — full list in the complete paper: https://tomesphere.com/paper/PMC12951675/full.md

---
Source: https://tomesphere.com/paper/PMC12951675