# Rational design of click-assembled chiral dendrimers: anticancer activity and molecular dynamics study

**Authors:** Tamer El Malah, Ahmed A. El-Rashedy

PMC · DOI: 10.1039/d6ra00668j · RSC Advances · 2026-03-02

## TL;DR

This study designs and tests chiral dendrimers using click chemistry, finding that a fully chiral version shows strong anticancer activity and selectivity.

## Contribution

The paper introduces a rational design of chiral dendrimers with varying chirality and evaluates their anticancer potential.

## Key findings

- Fully chiral dendrimer (9) showed the highest anticancer activity against cancer cell lines.
- Dendrimer (9) had reduced toxicity to normal cells compared to reference drugs.
- Molecular dynamics confirmed stable ERα binding with strong van der Waals interactions.

## Abstract

This study details the rational design, synthesis, and biological evaluation of a range of chiral dendritic compounds created using modular copper(i)-catalyzed azide–alkyne cycloaddition (CuAAC) click chemistry. We developed first-generation dendrimers (6–9) with systematically different degrees of chirality, comprising fully chiral, achiral, and mixed-chirality systems, as well as a multivalent second-generation dendrimer (12). The biological screening against human cancer cell lines (HCT-116, HepG-2, and MCF-7) revealed that the fully chiral first-generation dendrimer (9) was the most effective. Significantly, dendrimer (9) presented improved selectivity, as evidenced by a favorable therapeutic window with considerably reduced toxicity to normal WI-38 fibroblasts (IC50 = 46.79 ± 2.8 µM) relative to the reference drugs doxorubicin and sorafenib. On the other hand, the second-generation dendrimer (12) revealed slight cytotoxic effects, which can be attributed to limited cellular absorption related to its larger molecular size. Molecular dynamics (MD) simulations conducted on the ERα receptor have verified that dendrimer (9) establishes a stable complex with a total binding free energy (ΔGbind) of −65.07 ± 0.20 kcal mol−1, which is mainly influenced by robust van der Waals interactions and hydrophobic packing. Moreover, frontier molecular orbital (FMO) analysis has characterized dendrimer (9) as a kinetically stable entity with a HOMO–LUMO energy gap of 2.74 eV. These observations emphasize the important role of chirality and dendritic generation in anticancer potency, positioning these click-assembled chiral frameworks as promising lead structures for further development in targeted cancer therapy.

This study describes the design, synthesis, and evaluation of chiral dendrimers using click chemistry. The fully chiral dendrimer showed the highest anticancer activity, good selectivity, stable ERα binding, and promising potential for targeted cancer therapy.

## Linked entities

- **Proteins:** ESR1 (estrogen receptor 1)
- **Chemicals:** doxorubicin (PubChem CID 31703), sorafenib (PubChem CID 216239)

## Full-text entities

- **Genes:** TAT (tyrosine aminotransferase) [NCBI Gene 6898], ESR1 (estrogen receptor 1) [NCBI Gene 2099] {aka ER, ESR, ESRA, ESTRR, Era, NR3A1}, ERBB2 (erb-b2 receptor tyrosine kinase 2) [NCBI Gene 2064] {aka CD340, HER-2, HER-2/neu, HER2, MLN 19, MLN-19}
- **Diseases:** deaths (MESH:D003643), colorectal carcinoma (MESH:D015179), Cytotoxicity (MESH:D064420), breast adenocarcinoma (MESH:D001943), hepatocellular carcinoma (MESH:D006528), multidrug resistance (MESH:D018088), Cancer (MESH:D009369), colon carcinoma (MESH:D003110)
- **Chemicals:** 1H (-), 2H (MESH:D003903), TBTA (MESH:C047985), DOX (MESH:D004317), Na+ (MESH:D012964), CuSO4 (MESH:D019327), penicillin (MESH:D010406), amino acid (MESH:D000596), MTT (MESH:C070243), MgSO4 (MESH:D008278), Cl- (MESH:D002713), acetylene (MESH:D000114), tert-butanol (MESH:D020002), Acetone (MESH:D000096), oil (MESH:D009821), triazole (MESH:D014230), ATP (MESH:D000255), 4-hydroxytamoxifen (MESH:C016601), CO2 (MESH:D002245), PAMAM (MESH:C531249), lipid (MESH:D008055), Cu(i) (MESH:C073870), dendrimer (MESH:D050091), H (MESH:D006859), DMSO (MESH:D004121), argon (MESH:D001128), alkyne (MESH:D000480), folic acid (MESH:D005492), 3H (MESH:D014316), NaCl (MESH:D012965), formic acid (MESH:C030544), anthracyclines (MESH:D018943), PPI (MESH:C443641), formazan (MESH:D005562), CH2Cl2 (MESH:D008752), azide (MESH:D001386), carbon (MESH:D002244), streptomycin (MESH:D013307), H2O (MESH:D014867), sodium azide (MESH:D019810), SOR (MESH:D000077157), sodium ascorbate (MESH:D001205), 13C (MESH:C000615229)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** WI-38 — Homo sapiens (Human), Finite cell line (CVCL_0579), HePG-2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_0027), HCT-116 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_0291), MCF-7 — Homo sapiens (Human), Invasive breast carcinoma of no special type, Cancer cell line (CVCL_0031)

## Full text

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## Figures

12 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12951598/full.md

## References

59 references — full list in the complete paper: https://tomesphere.com/paper/PMC12951598/full.md

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Source: https://tomesphere.com/paper/PMC12951598