# Bioisostere-Driven Discovery of SePP: A Selenium-Containing Polypharmacological Agent Relevant to Fragile X Syndrome

**Authors:** Jason Wallach, Sean Cameron, Michael Dybek, Branden Stanley, Christopher Orme, Nour Riad, Pierce Kavanagh, Simon D. Brandt, Adam Knapp, James Gamrat, Rebekah Jauhola-Straight, Adeboye Adejare, Alexander J. Rogier, Richa Tyagi, Clinton E. Canal

PMC · DOI: 10.1021/acs.jmedchem.5c02700 · Journal of Medicinal Chemistry · 2026-02-10

## TL;DR

Scientists discovered a new selenium-based compound, SePP, that shows potential for treating Fragile X Syndrome by affecting multiple brain targets.

## Contribution

The novel contribution is the discovery of SePP, a selenium-containing compound with polypharmacological activity relevant to Fragile X Syndrome.

## Key findings

- SePP showed favorable polypharmacology and good brain penetration in mouse studies.
- SePP prevented audiogenic seizures in Fmr1 knockout mice without affecting motor coordination.
- In silico analyses helped explain the structure–activity relationships of SePP and related compounds.

## Abstract

Diphenidine is a prototypical 1,2-diarylethylamine that
functions
as an uncompetitive N-methyl-d-aspartate
receptor (NMDAR) antagonist and monoamine reuptake inhibitor. To examine
the effects of phenyl-ring bioisosteric replacement within this scaffold,
a series of diphenidine analogs incorporating chalcogen heterocycles
(2-furan, 2-thiophene, 3-thiophene, and 2-selenophene) was synthesized.
Compounds were evaluated for in vitro binding to rat forebrain NMDARs
and inhibition of human DAT, NET, and SERT in cell-based assays, enabling
assessment of polypharmacology. In silico analyses (molecular volume,
tPSA, electrostatic surfaces, stockholder charges) and induced-fit
docking were used to rationalize structure–activity relationships.
The 2-selenophene analog SePP is notable given the underexplored role
of selenium in medicinal chemistry. SePP exhibited favorable polypharmacology,
good brain penetration in mouse pharmacokinetic studies, and prevented
audiogenic seizures in Fmr1 knockout mice (10 mg/kg,
i.p.) without impairing motor coordination. These findings support
further exploration of SePP for fragile X syndrome.

## Linked entities

- **Genes:** FMR1 (fragile X messenger ribonucleoprotein 1) [NCBI Gene 2332]
- **Proteins:** Grin1 (glutamate receptor, ionotropic, NMDA1 (zeta 1)), SLC6A3 (solute carrier family 6 member 3), ELK3 (ETS transcription factor ELK3), SLC6A4 (solute carrier family 6 member 4)
- **Chemicals:** diphenidine (PubChem CID 206666)
- **Diseases:** Fragile X Syndrome (MONDO:0010383)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Slc6a3 (solute carrier family 6 (neurotransmitter transporter, dopamine), member 3) [NCBI Gene 13162] {aka DAT, Dat1}, Slc6a4 (solute carrier family 6 (neurotransmitter transporter, serotonin), member 4) [NCBI Gene 15567] {aka 5-HTT, Htt, Sert}, Grin1 (glutamate receptor, ionotropic, NMDA1 (zeta 1)) [NCBI Gene 14810] {aka GluN1, GluRdelta1, GluRzeta1, M100174, NMD-R1, NMDAR1}, Fmr1 (fragile X messenger ribonucleoprotein 1) [NCBI Gene 14265] {aka FMRP, Fmr-1}
- **Diseases:** Fragile X Syndrome (MESH:D005600), audiogenic seizures (MESH:D020195)
- **Chemicals:** Diphenidine (MESH:C000599677), chalcogen (MESH:D018011), 1,2-diarylethylamine (-), Selenium (MESH:D012643)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12951560/full.md

## References

117 references — full list in the complete paper: https://tomesphere.com/paper/PMC12951560/full.md

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Source: https://tomesphere.com/paper/PMC12951560