# Episodic Ataxia Associated With Synaptosomal-Associated Protein 25 (SNAP25) Variant: Beyond Epilepsy and Developmental Delay

**Authors:** Inês F Fernandes, Ana Cristina Figueiredo, João Parente Freixo, Juliette Dupont, João Carvalho

PMC · DOI: 10.7759/cureus.102586 · Cureus · 2026-01-29

## TL;DR

A child with a new SNAP25 gene variant showed seizures, developmental delay, and febrile-triggered ataxia, expanding the known effects of this genetic condition.

## Contribution

A novel de novo SNAP25 splice-site variant is reported, adding febrile-triggered episodic ataxia to the phenotypic spectrum of SNAP25-related disorders.

## Key findings

- A novel SNAP25 variant (c.114+2dup) was identified in a child with seizures and developmental delay.
- Febrile illness-triggered episodic ataxia is a newly reported feature of SNAP25-related developmental and epileptic encephalopathy.
- Levetiracetam monotherapy achieved complete seizure control in the patient.

## Abstract

Developmental and epileptic encephalopathies (DEEs) of infancy and childhood are characterized by early-onset seizures and developmental impairment. Heterozygous missense or loss-of-function variants in synaptosomal-associated protein 25 (SNAP25), a core component of the presynaptic soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) complex, have been implicated in a spectrum of DEEs with variable neurological features. We report a male child carrying a novel de novo splice-site variant in SNAP25, expanding the known mutational and phenotypic spectrum of this condition.

The patient presented at 32 months with afebrile seizures since seven months of age, with frequent seizure clusters and status epilepticus. He exhibited a moderate global developmental delay and recurrent, transient episodes of gait ataxia triggered by febrile illnesses, lasting up to one week and resolving without residual deficits. Neurological examination revealed mild microcephaly and a clumsy gait without persistent ataxia or weakness between febrile episodes. Brain magnetic resonance imaging (MRI) was normal, and the electroencephalogram (EEG) showed bilateral frontal paroxysmal activity. Genetic testing identified a heterozygous SNAP25 variant (NM_003081.5:c.114+2dup), predicted to abolish the donor splice site and confirmed as de novo, classified as likely pathogenic. The patient achieved complete seizure control under levetiracetam monotherapy and continues to show moderate global developmental delay.

This case broadens the genotypic and phenotypic spectrum of SNAP25-related DEE, highlighting febrile illness-triggered episodic ataxia as a previously unreported manifestation. It underscores the relevance of recognizing transient neurological decompensations in the context of SNARE complex dysfunction and highlights the potential for meaningful neurodevelopmental progress despite early epileptic encephalopathy.

## Linked entities

- **Genes:** SNAP25 (synaptosome associated protein 25) [NCBI Gene 6616]
- **Chemicals:** levetiracetam (PubChem CID 5284583)
- **Diseases:** developmental and epileptic encephalopathy (MONDO:0100062), episodic ataxia (MONDO:0016227)

## Full-text entities

- **Genes:** SNAR-E (small NF90 (ILF3) associated RNA E) [NCBI Gene 100170220], SNAP25 (synaptosome associated protein 25) [NCBI Gene 6616] {aka CMS18, DEE117, RIC-4, RIC4, SEC9, SNAP}, PRRT2 (proline rich transmembrane protein 2) [NCBI Gene 112476] {aka BFIC2, BFIS2, DSPB3, DYT10, EKD1, FICCA}, CACNA1A (calcium voltage-gated channel subunit alpha1 A) [NCBI Gene 773] {aka APCA, BI, CACNL1A4, CAV2.1, DEE42, EA2}, KCNA1 (potassium voltage-gated channel subfamily A member 1) [NCBI Gene 3736] {aka AEMK, EA1, HBK1, HUK1, KV1.1, MBK1}, GGT1 (gamma-glutamyltransferase 1) [NCBI Gene 2678] {aka CD224, D22S672, D22S732, GGT, GGT 1, GGTD}
- **Diseases:** ocular deviation (MESH:D010262), Episodic Ataxia (MESH:C580065), orotic aciduria (MESH:C537136), behavioral disturbances (MESH:D001523), weakness (MESH:D018908), dysmorphic (MESH:D057215), cerebral visual impairment (MESH:D014786), paroxysmal movement disorders (MESH:D002819), ophthalmoparesis (MESH:D009886), episodic ataxia type 2 (MESH:C535506), dysmorphic features (MESH:D000013), dystonia (MESH:D004421), status epilepticus (MESH:D013226), DEE (MESH:C562695), neuromuscular junction dysfunction (MESH:D020511), metabolic disorders (MESH:D008659), Seizure (MESH:D012640), febrile illness (MESH:D005334), cerebellar dysfunction (MESH:D002526), dysarthria (MESH:D004401), vertigo (MESH:D014717), developmental motor coordination disorder (MESH:D019957), intellectual impairment (MESH:C565406), Microcephaly (MESH:D008831), paroxysmal kinesigenic dyskinesia (MESH:C537180), carbohydrate-deficient transferrin (MESH:D018981), febrile (MESH:D000071072), developmental impairment (MESH:D007805), ptosis (MESH:C564553), CDT (MESH:C537067), ataxia (MESH:D001259), intellectual disability (MESH:D008607), brain volume loss (MESH:D001927), tremor (MESH:D014202), cerebellar ataxia (MESH:D002524), epileptic spasms (MESH:D013035), Muscular hypotonia (MESH:D009123), Epilepsy (MESH:D004827), neurodevelopmental impairment (MESH:D009422), movement disorders (MESH:D009069), motor impairment (MESH:D000068079), Developmental Delay (MESH:D002658), myopathic (MESH:D009135), choreoathetosis (MESH:C567034), epileptiform activity (MESH:D014277), clumsy gait (MESH:D020234), neurological decompensations (MESH:D006333)
- **Chemicals:** clonazepam (MESH:D002998), phenobarbital (MESH:D010634), valproate (MESH:D014635), 3-hydroxy-isovalerilcarnitine (-), levetiracetam (MESH:D000077287), calcium (MESH:D002118)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** c.114+2dup, c.649dupC, c.114+2dup

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## References

11 references — full list in the complete paper: https://tomesphere.com/paper/PMC12949669/full.md

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Source: https://tomesphere.com/paper/PMC12949669