# SNRPD2-mediated regulation of DDX39B splicing promotes endometrial cancer progression by suppressing the activation of CTSC cryptic exons

**Authors:** Yingwei Li, Zhongshao Chen, Yanling Liu, Yuehan Gao, Yingying Pu, Qianqian Gao, Feng Gao, Ning Yang, Peng Li

PMC · DOI: 10.1038/s41419-026-08489-4 · Cell Death & Disease · 2026-02-20

## TL;DR

This study shows that the protein SNRPD2 promotes endometrial cancer by regulating gene splicing, and targeting it could be a new treatment approach.

## Contribution

The paper identifies a novel SNRPD2–DDX39B–CTSC regulatory axis in endometrial cancer progression.

## Key findings

- SNRPD2 overexpression correlates with poor clinical outcomes in endometrial cancer.
- SNRPD2 silencing reduces tumor growth and metastasis in endometrial cancer models.
- SNRPD2 regulates DDX39B splicing, which in turn affects CTSC expression and cancer progression.

## Abstract

Recent studies have reported the overexpression of Sm proteins in several cancers, suggesting their potential as therapeutic targets; however, the specific Sm family members involved in endometrial cancer and their mechanisms remain unclear. Here, we show that the Sm protein SNRPD2 is markedly upregulated in both fresh-frozen and formalin-fixed paraffin-embedded (FFPE) endometrial cancer specimens and that its overexpression correlates with poorer clinical outcomes. In vitro and in vivo functional assays demonstrate that silencing SNRPD2 suppresses endometrial cancer cell proliferation and metastasis. Specifically, antisense oligonucleotides (ASOs) targeting SNRPD2 markedly reduced tumor growth in a patient-derived xenograft (PDX) model. Mechanistic analyses reveal that SNRPD2 knockdown induces the retention of intron 5 in DDX39B, resulting in the production of a noncoding transcript that is degraded by the nonsense-mediated decay (NMD) pathway and thereby decreases DDX39B expression. Reduced DDX39B levels permit the activation of a cryptic exon (Exon 2_3) in the CTSC mRNA, which introduces premature termination codons (PTCs) and triggers additional NMD-mediated degradation, leading to decreased CTSC expression. Thus, SNRPD2 maintains high DDX39B expression by preventing intron retention, and in turn, elevated DDX39B expression suppresses cryptic exon usage in CTSC to preserve CTSC expression, ultimately supporting malignant phenotypes of endometrial cancer. These results define a novel SNRPD2–DDX39B–CTSC regulatory axis and identify SNRPD2 as a promising therapeutic target for endometrial cancer.

## Linked entities

- **Genes:** SNRPD2 (small nuclear ribonucleoprotein D2 polypeptide) [NCBI Gene 6633], DDX39B (DExD-box helicase 39B) [NCBI Gene 7919], CTSC (cathepsin C) [NCBI Gene 1075]
- **Proteins:** DDX39B (DExD-box helicase 39B), CTSC (cathepsin C)
- **Diseases:** endometrial cancer (MONDO:0002447)

## Full-text entities

- **Genes:** TNFAIP2 (TNF alpha induced protein 2) [NCBI Gene 7127] {aka B94, EXOC3L3}, SNRPD2 (small nuclear ribonucleoprotein D2 polypeptide) [NCBI Gene 6633] {aka SMD2, SNRPD1, Sm-D2}, SNRPD3 (small nuclear ribonucleoprotein D3 polypeptide) [NCBI Gene 6634] {aka SMD3, Sm-D3}, STMN2 (stathmin 2) [NCBI Gene 11075] {aka SCG10, SCGN10}, SNRPF (small nuclear ribonucleoprotein polypeptide F) [NCBI Gene 6636] {aka SMF, Sm-F, snRNP-F}, Mki67 (antigen identified by monoclonal antibody Ki 67) [NCBI Gene 17345] {aka D630048A14Rik, Ki-67, Ki67}, SNRPC (small nuclear ribonucleoprotein polypeptide C) [NCBI Gene 6631] {aka U1C, Yhc1}, P2RY6 (pyrimidinergic receptor P2Y6) [NCBI Gene 5031] {aka P2Y6}, PABPN1 (poly(A) binding protein nuclear 1) [NCBI Gene 8106] {aka OPMD, PAB2, PABII, PABP-2, PABP2}, MTA1 (metastasis associated 1) [NCBI Gene 9112], CTSC (cathepsin C) [NCBI Gene 1075] {aka CPPI, DPP-I, DPP1, DPPI, HMS, JP}, SNRPE (small nuclear ribonucleoprotein polypeptide E) [NCBI Gene 6635] {aka HYPT11, SME, Sm-E, snRNP-E}, FUT3 (fucosyltransferase 3 (Lewis blood group)) [NCBI Gene 2525] {aka CD174, FT3B, FucT-III, LE, Les}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, Snrpd2 (small nuclear ribonucleoprotein D2) [NCBI Gene 107686] {aka 1810009A06Rik, SMD2}, TNRC6C (trinucleotide repeat containing adaptor 6C) [NCBI Gene 57690], DDX39A (DExD-box helicase 39A) [NCBI Gene 10212] {aka BAT1, BAT1L, DDX39, DDXL, URH49}, BRCA2 (BRCA2 DNA repair associated) [NCBI Gene 675] {aka BRCC2, BROVCA2, FACD, FAD, FAD1, FANCD}, CTNNBIP1 (catenin beta interacting protein 1) [NCBI Gene 56998] {aka ICAT}, GPX4 (glutathione peroxidase 4) [NCBI Gene 2879] {aka GPx-4, GSHPx-4, MCSP, PHGPx, SMDS, snGPx}, TARDBP (TAR DNA binding protein) [NCBI Gene 23435] {aka ALS10, TDP-43}, EWSR1 (EWS RNA binding protein 1) [NCBI Gene 2130] {aka EWS, EWS-FLI1}, UNC13A (unc-13 homolog A) [NCBI Gene 23025] {aka IDDSF, Munc13-1, NEDHES, NEDSMS}, UPF1 (UPF1 RNA helicase and ATPase) [NCBI Gene 5976] {aka HUPF1, NORF1, RENT1, UTF, pNORF1, smg-2}, SNRPG (small nuclear ribonucleoprotein polypeptide G) [NCBI Gene 6637] {aka SMG, Sm-G}, BRCA1 (BRCA1 DNA repair associated) [NCBI Gene 672] {aka BRCAI, BRCC1, BROVCA1, FANCS, IRIS, PNCA4}, HSPA5 (heat shock protein family A (Hsp70) member 5) [NCBI Gene 3309] {aka BIP, GRP78, HEL-S-89n}, DDX39B (DExD-box helicase 39B) [NCBI Gene 7919] {aka BAT1, D6S81E, UAP56}, TGM5 (transglutaminase 5) [NCBI Gene 9333] {aka PSS2, TG(X), TGASE5, TGASEX, TGMX, TGX}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, HSPA4 (heat shock protein family A (Hsp70) member 4) [NCBI Gene 3308] {aka APG-2, HEL-S-5a, HS24/P52, HSPH2, RY, hsp70}, RAC1 (Rac family small GTPase 1) [NCBI Gene 5879] {aka MIG5, MRD48, Rac-1, TC-25, p21-Rac1}, NFIC (nuclear factor I C) [NCBI Gene 4782] {aka CTF, CTF5, NF-I, NF-I/C, NF1-C, NFI}, FGFR4 (fibroblast growth factor receptor 4) [NCBI Gene 2264] {aka CD334, JTK2, TKF}, VDR (vitamin D receptor) [NCBI Gene 7421] {aka NR1I1, PPP1R163}, MYCN (MYCN proto-oncogene, bHLH transcription factor) [NCBI Gene 4613] {aka FGLDS1, MODED, MPAPA, MYCNsORF, MYCNsPEP, N-myc}, SNRPB (small nuclear ribonucleoprotein polypeptides B and B1) [NCBI Gene 6628] {aka CCMS, COD, SNRPB1, Sm-B/B', SmB/B', SmB/SmB'}, FOXP3 (forkhead box P3) [NCBI Gene 50943] {aka AIID, DIETER, IPEX, JM2, PIDX, XPID}, DAG1 (dystroglycan 1) [NCBI Gene 1605] {aka 156DAG, A3a, AGRNR, DAG, LGMDR16, MDDGA9}, POTEF (POTE ankyrin domain family member F) [NCBI Gene 728378] {aka A26C1B, POTE2alpha, POTEACTIN}, R3HDM1 (R3H domain containing 1) [NCBI Gene 23518] {aka R3HDM}, SNRPD1 (small nuclear ribonucleoprotein D1 polypeptide) [NCBI Gene 6632] {aka HsT2456, SMD1, SNRPD, Sm-D1}, RAP1B (RAP1B, member of RAS oncogene family) [NCBI Gene 5908] {aka K-REV, RAL1B, THC11}, POLA1 (DNA polymerase alpha 1, catalytic subunit) [NCBI Gene 5422] {aka NSX, PDR, POLA, VEODS, p180}, COL11A2 (collagen type XI alpha 2 chain) [NCBI Gene 1302] {aka DFNA13, DFNB53, FBCG2, HKE5, OSMEDA, OSMEDB}, NAA38 (N-alpha-acetyltransferase 38, NatC auxiliary subunit) [NCBI Gene 84316] {aka LSMD1, MAK31, PFAAP2}, LIX1L (limb and CNS expressed 1 like) [NCBI Gene 128077]
- **Diseases:** colorectal cancer (MESH:D015179), IR (MESH:D016055), tumorigenic (MESH:D002471), Endometrial cancer (MESH:D016889), deaths (MESH:D003643), metastasis (MESH:D009362), PDX (MESH:C536408), cytotoxicity (MESH:D064420), ovarian cancer (MESH:D010051), triple-negative breast cancer (MESH:D064726), breast cancer (MESH:D001943), bladder cancer (MESH:D001749), HCC (MESH:D006528), neurodegenerative diseases (MESH:D019636), CANCER (MESH:D009369), tumorigenesis (MESH:D063646), PTC (MESH:D000077273), obesity (MESH:D009765), neuroblastoma (MESH:D009447)
- **Chemicals:** puromycin (MESH:D011691), romidepsin (MESH:C087123), Actinomycin D (MESH:D003609), hydrogen peroxide (MESH:D006861), DAB (-), Lipofectamine 2000 (MESH:C086724), olaparib (MESH:C531550), polybrene (MESH:D006583), lipid (MESH:D008055), CO2 (MESH:D002245), McCoy's 5 A medium (MESH:C113109), formalin (MESH:D005557), CHX (MESH:D003513), PVDF (MESH:C024865), Paraffin (MESH:D010232), EDTA (MESH:D004492), xylene (MESH:D014992), TRIzol (MESH:C411644), ethanol (MESH:D000431), SDS (MESH:D012967), 5-ethynyl-2'-deoxyuridine (MESH:C031086), sorafenib (MESH:D000077157)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090], Mycoplasma (genus) [taxon 2093]
- **Cell lines:** HEC-1A — Homo sapiens (Human), Type II endometrial adenocarcinoma, Cancer cell line (CVCL_0293), PLKO.1 — Mus musculus (Mouse), Hybridoma (CVCL_C7RB), CPTAC — Homo sapiens (Human), Embryonic stem cell (CVCL_9T86), HEK293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), AN3CA — Homo sapiens (Human), Acanthosis nigricans, Cancer cell line (CVCL_0028), Ishikawa — Homo sapiens (Human), Type I endometrial adenocarcinoma, Cancer cell line (CVCL_2529)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12949242/full.md

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12949242/full.md

## References

2 references — full list in the complete paper: https://tomesphere.com/paper/PMC12949242/full.md

---
Source: https://tomesphere.com/paper/PMC12949242