# Combining tissue-derived microRNAs with clinical risk models for prediction of HCC recurrence after liver transplantation: A proof-of-concept study

**Authors:** Theresa Lederer, Konrad Lehr, Stefanie Bobe, Kim Falkenberg, Cosima Thon, Emily Hoffmann, Wolfgang Roll, Florian Rennebaum, Haluk Morgül, Max Masthoff, Osman Öcal, Jonel Trebicka, Moritz Wildgruber, Alexander Link, Philipp Schindler

PMC · DOI: 10.1038/s41598-026-41688-9 · Scientific Reports · 2026-02-27

## TL;DR

This study shows that combining microRNA profiles from liver cancer tissue with clinical models can better predict cancer recurrence after liver transplants.

## Contribution

The study introduces a 3-miRNA signature that, when combined with clinical models, significantly improves HCC recurrence prediction after liver transplantation.

## Key findings

- A 3-miRNA signature (miR-369-2-5p, miR-424, miR-718) effectively distinguishes between recurrence and non-recurrence cases.
- Adding the miRNA signature to clinical models increased AUC for recurrence prediction from 0.5 to 0.7 to 0.94–0.96.
- High-risk patients had a shorter median recurrence-free survival (17.0 months vs. 38.5 months).

## Abstract

To evaluate the utility of microRNAs (miRNAs) integrated with current clinical risk models as predictive models for hepatocellular carcinoma (HCC) recurrence after liver transplantation (LT). This retrospective proof-of-concept study included 20 patients with HCC who underwent LT between 2007 and 2021 (n = 10 recurrent, n = 10 5-year recurrence-free). MiRNA profiling was performed on formalin-fixed, paraffin-embedded (FFPE) HCC explant tissue at the time of transplantation and clinical data were collected. The predictive value of miRNA expression for HCC recurrence was evaluated in a hybrid data- and hypothesis-driven approach and combined with clinical risk models (Milan, UCSF, Metroticket 2.0 and AFP). Kaplan-Meier analysis was performed to analyze recurrence-free survival (RFS). We identified a 3-miRNA signature - miR-3692-5p, miR-424, and miR-718 - that revealed discriminatory capacity between recurrence and non-recurrence. Adding this signature to clinical models increased the area under the receiver operating characteristic curve (AUC) for modeling HCC recurrence from 0.5 to 0.7 to 0.94–0.96. The combined models were used to categorize patients as high- or low-risk, with patients in the high-risk group having a shorter estimated median RFS (17.0 months vs. 38.5 months, p < 0.05). Integrating tissue-derived molecular miRNA signatures with existing clinical risk models may enhance the prediction of HCC recurrence following LT. Incorporating molecular approaches into current protocols could refine post-transplant risk stratification and surveillance guidance.

## Linked entities

- **Diseases:** hepatocellular carcinoma (MONDO:0007256), HCC (MONDO:0007256)

## Full-text entities

- **Genes:** GGTLC5P (gamma-glutamyltransferase light chain 5 pseudogene) [NCBI Gene 653590] {aka GGT}, MIR3692 (microRNA 3692) [NCBI Gene 100500899], EGR3 (early growth response 3) [NCBI Gene 1960] {aka EGR-3, PILOT}, PTEN (phosphatase and tensin homolog) [NCBI Gene 5728] {aka 10q23del, BZS, CWS1, DEC, GLM2, MHAM}, ALPP (alkaline phosphatase, placental) [NCBI Gene 250] {aka ALP, PALP, PLAP, PLAP-1}, SLC17A5 (solute carrier family 17 member 5) [NCBI Gene 26503] {aka AST, ISSD, NSD, SD, SIALIN, SIASD}, AFP (alpha fetoprotein) [NCBI Gene 174] {aka AFPD, FETA, HPAFP}, MIR718 (microRNA 718) [NCBI Gene 100313781] {aka hsa-mir-718}, GGT1 (gamma-glutamyltransferase 1) [NCBI Gene 2678] {aka CD224, D22S672, D22S732, GGT, GGT 1, GGTD}, HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}, MIR424 (microRNA 424) [NCBI Gene 494336] {aka MIR322, MIRN424, hsa-mir-424, miRNA424, mir-424}
- **Diseases:** liver disease (MESH:D008107), chronic alcohol abuse (MESH:D000437), Solid Tumors (MESH:D009369), Hepatitis C (MESH:D019698), MASH (MESH:D005234), hepatocellular carcinogenesis (MESH:D063646), cholangiocarcinoma (MESH:D018281), ischemia (MESH:D007511), hypoxia (MESH:D000860), End-Stage Liver Disease (MESH:D058625), metastasis (MESH:D009362), death (MESH:D003643), Computed (MESH:C000719218), alcoholic liver disease (MESH:D008108), HCC (MESH:D006528), liver tumor (MESH:D008113)
- **Chemicals:** paraffin (MESH:D010232), H&amp;E (MESH:D006371), formalin (MESH:D005557)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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Source: https://tomesphere.com/paper/PMC12949183