# Activation of IRF3 in cardiomyocytes impairs mitochondrial oxidative function through PGC-1α inhibition and drives heart failure

**Authors:** Manju Kumari, Ioannis Evangelakos, Anushka Deshpande, Kirstie A. De Jong, Nesrin Schmiedel, Nicolàs Palacio-Escat, Adriano de Britto Chaves-Filho, Roberto Carlos Frias-Soler, Glynis Klinke, Hyun Cheol Roh, Luisa Lange, Michael Berlin, Marceline M. Fuh, Jakob Johannes Buss, Tian Tian, Carolin Lerchenmüller, Marc Freichel, Almut Schulze, Viacheslav O. Nikolaev, Thomas Eschenhagen, Evan D. Rosen, Ludger Scheja, Ashraf Yusuf Rangrez, Joerg Heeren, Norbert Frey

PMC · DOI: 10.1038/s41467-026-69792-4 · Nature Communications · 2026-02-27

## TL;DR

This study shows that IRF3 activation in heart muscle cells disrupts mitochondrial function and worsens heart failure by inhibiting PGC-1α.

## Contribution

The paper identifies IRF3 as a novel transcriptional regulator linking inflammation and metabolic dysfunction in heart failure.

## Key findings

- Elevated IRF3 phosphorylation is observed in patients and mice with ischemic cardiomyopathy.
- IRF3 activation represses Ppargc1α, leading to mitochondrial dysfunction and excessive IFN activation.
- Restoring Ppargc1α in IRF3-overexpressing mice improves cardiac function and reduces inflammation.

## Abstract

Heightened sterile inflammation and mitochondrial metabolic dysfunction drives the pathophysiology of heart failure in ischemic cardiomyopathy. Yet, the transcriptional regulators within cardiomyocytes driving crosstalk between inflammation and energy metabolism remain ill-defined. Here we identify elevated Ser396/Ser398 phosphorylation of the type I interferon (IFN) response regulating transcription factor IRF3 in the myocardium of patients and male mice with ischemic cardiomyopathy. Cardiomyocyte-specific IRF3 deficiency attenuates ischemia induced contractile dysfunction. Conversely, IRF3 activation in cardiomyocytes through a phosphomimetic IRF3 mutant represses Ppargc1α expression leading to dysfunctional mitochondrial oxidative phosphorylation, altered metabolic flux in the pentose phosphate pathway/TCA cycle, impaired NAD metabolism and an excessive type I IFN activation, collectively detrimental for cardiac function. Restoring cardiomyocyte-specific Ppargc1α expression in IRF3-overexpressor male mice attenuates contractile dysfunction by augmenting a metabolic shift towards fatty acid oxidation and decreasing inflammatory fibrotic responses. These findings identify IRF3 activation in cardiomyocytes as a transcriptional nexus between cardiac inflammation and metabolic fuel switch contributing to heart failure progression.

Transcriptional crosstalk between inflammation and energy metabolism within cardiomyocytes remains unclear. Here, the authors identify IRF3/PGC-1α as a bidirectional transcriptional nexus between IFN response and mitochondrial oxidative phosphorylation in cardiomyocytes altering cardiac function.

## Linked entities

- **Genes:** IRF3 (interferon regulatory factor 3) [NCBI Gene 3661], PPARGC1A (PPARG coactivator 1 alpha) [NCBI Gene 10891]
- **Diseases:** heart failure (MONDO:0005252)

## Full-text entities

- **Genes:** PPARGC1A (PPARG coactivator 1 alpha) [NCBI Gene 10891] {aka LEM6, PGC-1(alpha), PGC-1alpha, PGC-1v, PGC1, PGC1A}, Esrra (estrogen related receptor, alpha) [NCBI Gene 26379] {aka ERRalpha, Err1, Estrra, Nr3b1}, Sdhb (succinate dehydrogenase complex, subunit B, iron sulfur (Ip)) [NCBI Gene 67680] {aka 0710008N11Rik}, Ifnb1 (interferon beta 1, fibroblast) [NCBI Gene 15977] {aka IFN-beta, IFNB, If1da1, Ifb}, COX2 (cytochrome c oxidase subunit II) [NCBI Gene 17709], Myh6 (myosin, heavy polypeptide 6, cardiac muscle, alpha) [NCBI Gene 17888] {aka A830009F23Rik, Myhc-a, Myhca, alpha-MHC, alphaMHC}, Col12a1 (collagen, type XII, alpha 1) [NCBI Gene 12816], Idh2 (isocitrate dehydrogenase 2 (NADP+), mitochondrial) [NCBI Gene 269951] {aka E430004F23, IDPm, Idh-2}, Nadk2 (NAD kinase 2, mitochondrial) [NCBI Gene 68646] {aka MNADK, Nadkd1}, H3c7 (H3 clustered histone 7) [NCBI Gene 260423] {aka H3.2-221, H3c13, H3c14, H3c15, H3c2, H3c3}, ND4 (NADH dehydrogenase subunit 4) [NCBI Gene 17719], Ppargc1a (peroxisome proliferative activated receptor, gamma, coactivator 1 alpha) [NCBI Gene 19017] {aka A830037N07Rik, Gm11133, PGC-1, PPARGC-1-alpha, Pgc-1alpha, Pgc1}, Mef2a (myocyte enhancer factor 2A) [NCBI Gene 17258] {aka A430079H05Rik}, Col3a1 (collagen, type III, alpha 1) [NCBI Gene 12825] {aka Col3a-1, Tsk-2, Tsk2}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, Ppp2ca (protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform) [NCBI Gene 19052] {aka PP2A}, Ckm (creatine kinase, muscle) [NCBI Gene 12715] {aka CPK-M, Ckmm, M-CK, MCK}, Cpt1b (carnitine palmitoyltransferase 1b, muscle) [NCBI Gene 12895] {aka Cpt1, Cpt1-m, Cpti, Cpti-m, M-cpti}, Ikbke (inhibitor of kappaB kinase epsilon) [NCBI Gene 56489] {aka IKK-E, IKK-i, IKKepsilon, Ikki}, Il6 (interleukin 6) [NCBI Gene 16193] {aka Il-6}, Tfb2m (transcription factor B2, mitochondrial) [NCBI Gene 15278] {aka Hkp1, mTFB2M, mtTFB2}, Rplp0 (ribosomal protein lateral stalk subunit P0) [NCBI Gene 11837] {aka 36B4, Arbp, L10E}, Irf9 (interferon regulatory factor 9) [NCBI Gene 16391] {aka Irf-9, Isgf3g, p48}, Naprt (nicotinate phosphoribosyltransferase) [NCBI Gene 223646] {aka 9130210N20Rik, Naprt1}, Idh3b (isocitrate dehydrogenase 3 (NAD+) beta) [NCBI Gene 170718], Rnase1 (ribonuclease A family member 1, pancreatic) [NCBI Gene 364304] {aka RL1, Rib1}, Rsad2 (radical S-adenosyl methionine domain containing 2) [NCBI Gene 58185] {aka 2510004L01Rik, SAND, Vig1, cig5}, Idh1 (isocitrate dehydrogenase 1 (NADP+), soluble) [NCBI Gene 15926] {aka E030024J03Rik, Id-1, Idh-1, Idpc}, Tfam (transcription factor A, mitochondrial) [NCBI Gene 21780] {aka Hmgts, mtTFA, tsHMG}, Ifit1 (interferon-induced protein with tetratricopeptide repeats 1) [NCBI Gene 15957] {aka GARG-16, IFI-56K, ISG56, Ifi56, P56}, Naxe (NAD(P)HX epimerase) [NCBI Gene 246703] {aka AI-BP, AIBP, Apoa1bp, Apoa1ip, ESTM37}, ND1 (NADH dehydrogenase subunit 1) [NCBI Gene 17716], Ccl5 (C-C motif chemokine ligand 5) [NCBI Gene 20304] {aka MuRantes, RANTES, SISd, Scya5, TCP228}, Pparg (peroxisome proliferator activated receptor gamma) [NCBI Gene 19016] {aka Nr1c3, PPAR-gamma, PPAR-gamma2, PPARgamma, PPARgamma2}, Il1b (interleukin 1 beta) [NCBI Gene 16176] {aka IL-1beta, Il-1b}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, Rxra (retinoid X receptor alpha) [NCBI Gene 20181] {aka 9530071D11Rik, Nr2b1, RXRalpha1}, Ccl2 (C-C motif chemokine ligand 2) [NCBI Gene 20296] {aka HC11, JE, MCAF, MCP-1, MCP1, SMC-CF}, Acox1 (acyl-Coenzyme A oxidase 1, palmitoyl) [NCBI Gene 11430] {aka AOX, Acox, D130055E20Rik, Paox}, Gpi1 (glucose-6-phosphate isomerase 1) [NCBI Gene 14751] {aka Amf, Gpi, Gpi-1, Gpi-1r, Gpi-1s, Gpi-1t}, Mapk14 (mitogen-activated protein kinase 14) [NCBI Gene 26416] {aka CSBP2, Crk1, Csbp1, Mxi2, PRKM14, PRKM15}, Cat (catalase) [NCBI Gene 12359] {aka 2210418N07, Cas-1, Cas1, Cs-1}, Nmnat1 (nicotinamide nucleotide adenylyltransferase 1) [NCBI Gene 66454] {aka 2610529L11Rik, 5730441G13Rik, D4Cole1e, nmnat}, Ppargc1a (PPARG coactivator 1 alpha) [NCBI Gene 83516] {aka LRPGC1, PGC-1v, PGCvf, PGCvf-1, PGCvf1, Ppargc1}, Tnnt2 (troponin T2, cardiac) [NCBI Gene 21956] {aka Tnt, cTnT}, ND4L (NADH dehydrogenase subunit 4L) [NCBI Gene 17720], IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, CYTB (cytochrome b) [NCBI Gene 17711], Idh3a (isocitrate dehydrogenase 3 (NAD+) alpha) [NCBI Gene 67834] {aka 1110003P10Rik, 1500012E04Rik}, Itgax (integrin alpha X) [NCBI Gene 16411] {aka Cd11c, Cr4, N418}, Tbk1 (TANK-binding kinase 1) [NCBI Gene 56480] {aka 1200008B05Rik}, Dgat2 (diacylglycerol O-acyltransferase 2) [NCBI Gene 67800] {aka 0610010B06Rik, ARAT, DGAT-2}, Gt(ROSA)26Sor (gene trap ROSA 26, Philippe Soriano) [NCBI Gene 14910] {aka Gtrgeo26, Gtrosa26, R26, ROSA26, Thumpd3as1}, Sdha (succinate dehydrogenase complex, subunit A, flavoprotein (Fp)) [NCBI Gene 66945] {aka 1500032O14Rik, 2310034D06Rik, 4921513A11, FP, SDH2, SDHF}, Acad10 (acyl-Coenzyme A dehydrogenase family, member 10) [NCBI Gene 71985] {aka 2410021P16Rik}, Ndufb8 (NADH:ubiquinone oxidoreductase subunit B8) [NCBI Gene 67264] {aka 2900010I05Rik, CI-ASHI}, Col1a1 (collagen, type I, alpha 1) [NCBI Gene 12842] {aka Col1a-1, Cola-1, Cola1, Mov-13, Mov13}, ATP6 (ATP synthase F0 subunit 6) [NCBI Gene 17705], Gpam (glycerol-3-phosphate acyltransferase, mitochondrial) [NCBI Gene 14732] {aka GPAT, GPAT-1, GPAT1, P90}, S100a8 (S100 calcium binding protein A8 (calgranulin A)) [NCBI Gene 20201] {aka 60B8Ag, B8Ag, CFAg, CP-10, Caga, MRP8}
- **Diseases:** ICM (MESH:D009202), hypoxic (MESH:D002534), obese (MESH:D009765), hypoxia (MESH:D000860), systemic lupus erythematosus (MESH:D008180), metabolic dysfunction (MESH:D008659), ischemia (MESH:D007511), cardiotoxic (MESH:D066126), myocardial cellular (MESH:D004806), mitochondrial (MESH:D028361), fibrosis (MESH:D005355), Inflammation (MESH:D007249), myocardial insufficiency (MESH:D000309), ischemic myocardium (MESH:D017682), ischemic (MESH:D002545), diabetic (MESH:D003920), carnitine (MESH:C536778), failing hearts (MESH:D055111), Cardiac dysfunction (MESH:D006331), cardiac remodeling (MESH:D020257), NRCMs (MESH:D007232), infarct (MESH:D007238), HF (MESH:D006333), cytokine storm (MESH:D000080424), viral myocarditis (MESH:D014777), hypertension (MESH:D006973), reperfusion injury (MESH:D015427), ES (MESH:D012512), cardiac sterile (MESH:D007246), ischemic injury (MESH:D017202), SARS-CoV-2 (MESH:D000086382), infection (MESH:D007239), MI (MESH:D009203)
- **Chemicals:** 2,3-butanedione-monoxime (MESH:C004717), TRIzol (MESH:C411644), NaF (MESH:D012969), ammonium carbonate (MESH:C040502), NEFA (MESH:D005230), UK5099 (MESH:C043654), H2O (MESH:D014867), B (MESH:D001895), ceramide (MESH:D002518), NaOH (MESH:D012972), 13C (MESH:C000615229), Blood glucose (MESH:D001786), cholesterol (MESH:D002784), poly-T (MESH:D011071), ketone bodies (MESH:D007657), Sedoheptulose-7-phosphate (MESH:C020495), HCl (MESH:D006851), iPrOH (MESH:D019840), SDS (MESH:D012967), UDP-Glucosamine (MESH:C026712), CaCl2 (MESH:D002122), DTT (MESH:D004229), DBPS (MESH:C038657), Propionyl-Carnitine (MESH:C003223), O2 (MESH:D010100), phosphates (MESH:D010710), formic acid (MESH:C030544), NaCl (MESH:D012965), Methanol (MESH:D000432), KHCO3 (MESH:C026329), succinate (MESH:D019802), 3-Hydroxybutyric acid (MESH:D020155), Etomoxir (MESH:C054207), pentose phosphate (MESH:D010428), Streptomycin (MESH:D013307), ketone (MESH:D007659), Triton X-100 (MESH:D017830), Acetonitrile (MESH:C032159), 2-Deoxy-D-glucose (MESH:D003847), triglyceride (MESH:D014280), N2 (MESH:D009584), dichloromethane (MESH:D008752), F12 (MESH:C007782), choline (MESH:D002794), Poly I:C (MESH:D011070), EDTA (MESH:D004492), Fumaric acid (MESH:C032005), Tamoxifen (MESH:D013629), ammonium hydroxide (MESH:D064753), Pioglitazone (MESH:D000077205), Dimethylglycine (MESH:C025138), MTBE (MESH:C043243), LCER (MESH:C009744), Lipids (MESH:D008055), PFA (MESH:C003043), LPS (MESH:D008070), chloroform (MESH:D002725), ammonium acetate (MESH:C018824), L-glutamine (MESH:D005973), CO2 (MESH:D002245)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Moloney murine leukemia virus (no rank) [taxon 11801], Homo sapiens (human, species) [taxon 9606], Adenoviridae (family) [taxon 10508], Rattus norvegicus (brown rat, species) [taxon 10116]
- **Mutations:** serine/threonine, C with 0, Ser396 and Ser398 to Asp, Ser 398, Ser388 and Ser390 are mutated to Asp
- **Cell lines:** /6 — Homo sapiens (Human), Tongue squamous cell carcinoma, Cancer cell line (CVCL_5985), AAV9 — Homo sapiens (Human), Transformed cell line (CVCL_6871), C57BL/6 N — Mus musculus (Mouse), Embryonic stem cell (CVCL_2H81), fibroblasts — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_0594), CMI3OE — Cercopithecus mitis (Blue monkey), Transformed cell line (CVCL_E161), ES — Homo sapiens (Human), Embryonic stem cell (CVCL_C769), HEK293A — Homo sapiens (Human), Transformed cell line (CVCL_0045), C57BL/6 — Mus musculus (Mouse), Transformed cell line (CVCL_C0MU)

## Full text

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## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12948977/full.md

## References

7 references — full list in the complete paper: https://tomesphere.com/paper/PMC12948977/full.md

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Source: https://tomesphere.com/paper/PMC12948977