# oxPAPC‐Mediated lncRNA CYP1B1‐AS1 From Dendritic Cells Accelerates Atherosclerosis

**Authors:** Yuheng Cheng, Lang Ni, Changhao Ke, Yuanjie He, Youyang Huang, Shiwan Lu, Yongchao Zhao, Junbo Ge, Bei Shi, Zhenglong Wang

PMC · DOI: 10.1111/jcmm.71066 · Journal of Cellular and Molecular Medicine · 2026-02-27

## TL;DR

This study shows that a specific long non-coding RNA from dendritic cells, triggered by oxPAPC, worsens atherosclerosis through a regulatory loop involving NFATC2.

## Contribution

Identifies CYP1B1-AS1 as a novel DC-derived lncRNA that accelerates atherosclerosis via a positive regulatory loop with NFATC2.

## Key findings

- CYP1B1-AS1 is a key oxPAPC-induced lncRNA in dendritic cells that promotes atherosclerosis.
- CYP1B1-AS1 forms a positive regulatory loop with NFATC2, enhancing CYP1B1 expression.
- Adoptive transfer of CYP1B1-AS1-expressing dendritic cells in mice accelerates atherosclerosis progression.

## Abstract

Oxidised 1‐palmitoyl‐2‐arachidonoyl‐sn‐glycero‐3‐phosphorylcholine (oxPAPC), dendritic cells (DCs), and long non‐coding RNAs (lncRNAs) play crucial roles in atherosclerosis (AS). This study aimed to determine whether oxPAPC‐induced DC‐derived lncRNAs contribute to AS and to elucidate the underlying regulatory mechanisms. DCs were treated with increasing oxPAPC concentrations to assess transcriptomic changes. RNA sequencing was used to identify differential expression of lncRNAs. ChIP‐Seq and RNA pull‐down assays were used to assess direct binding between lncRNA CYP1B1‐AS1 and NFATC2. The association between CYP1B1‐AS1 and CYP1B1 was assessed using Pearson's correlation analysis. Elevated serum oxPAPC levels were confirmed in patients with coronary heart disease. In vitro, sustained oxPAPC stimulation activated the TLR4‐MD2 pathway in DCs. CYP1B1‐AS1 was identified as the key oxPAPC‐induced DC‐derived lncRNA, with Gm33055 as its murine homologue. RNA sequencing revealed oxPAPC‐driven alterations in DC chemotaxis, differentiation, and lymphocyte activation. Analysis of human atherosclerotic plaque‐derived DCs showed significant CYP1B1‐AS1 upregulation. Gm33055 enhanced Cyp1b1 expression in murine DCs. Mechanistically, oxPAPC promoted NFATC2 nuclear translocation. NFATC2 binds to the CYP1B1‐AS1 promoter, whereas CYP1B1‐AS1 directly interacts with NFATC2, forming a positive regulatory loop. Adoptive transfer of m‐CYP1B1‐AS1‐expressing DCs into Apoe
−/− mice accelerated AS progression. These findings identify a DC‐derived lncRNA‐mediated regulatory axis that promotes AS and suggest potential therapeutic targets.

## Linked entities

- **Genes:** CYP1B1 (cytochrome P450 family 1 subfamily B member 1) [NCBI Gene 1545], CYP1B1-AS1 (CYP1B1 antisense RNA 1) [NCBI Gene 285154], Gm33055 (predicted gene, 33055) [NCBI Gene 102635809], NFATC2 (nuclear factor of activated T cells 2) [NCBI Gene 4773]
- **Proteins:** TLR4 (toll like receptor 4), LY96 (lymphocyte antigen 96)
- **Diseases:** atherosclerosis (MONDO:0005311), coronary heart disease (MONDO:0005010)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** NLRP3 (NLR family pyrin domain containing 3) [NCBI Gene 114548] {aka AGTAVPRL, AII, AVP, C1orf7, CIAS1, CLR1.1}, Dcn (decorin) [NCBI Gene 13179] {aka DC, DSPG2, PG40, PGII, PGS2, SLRR1B}, Rbp4 (retinol binding protein 4, plasma) [NCBI Gene 19662] {aka Rbp-4}, Nfatc2 (nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2) [NCBI Gene 18019] {aka NF-ATc2, NF-ATp, NFAT1, NFAT1-D, Nfatp}, CD14 (CD14 molecule) [NCBI Gene 929], CASP1 (caspase 1) [NCBI Gene 834] {aka ICE, IL1BC, P45}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, ALB (albumin) [NCBI Gene 213] {aka FDAHT, HSA, PRO0883, PRO0903, PRO1341}, Csf2 (colony stimulating factor 2 (granulocyte-macrophage)) [NCBI Gene 12981] {aka CSF, Csfgm, GMCSF, Gm-CSf, MGI-IGM}, PYCARD (PYD and CARD domain containing) [NCBI Gene 29108] {aka ASC, CARD5, TMS, TMS-1, TMS1}, CSF2 (colony stimulating factor 2) [NCBI Gene 1437] {aka CSF, GMCSF}, Sox10 (SRY (sex determining region Y)-box 10) [NCBI Gene 20665] {aka Dom, Sox21, gt}, Il4 (interleukin 4) [NCBI Gene 16189] {aka BSF-1, Il-4}, CYP1B1 (cytochrome P450 family 1 subfamily B member 1) [NCBI Gene 1545] {aka ASGD6, CP1B, CYPIB1, GLC3A, P4501B1}, Cyp1b1 (cytochrome P450, family 1, subfamily b, polypeptide 1) [NCBI Gene 13078] {aka CP1B, CYPIB1, P4501b1}, Ptprc (protein tyrosine phosphatase receptor type C) [NCBI Gene 19264] {aka B220, CD45R, Cd45, L-CA, Ly-5, Lyt-4}, Neat1 (nuclear paraspeckle assembly transcript 1 (non-protein coding)) [NCBI Gene 66961] {aka 2310043N10Rik, VINC}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, NEXN-AS1 (NEXN antisense RNA 1) [NCBI Gene 374987] {aka C1orf118}, RELA (RELA proto-oncogene, NF-kB subunit) [NCBI Gene 5970] {aka AIF3BL3, CMCU, NFKB3, p65}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, Ly96 (lymphocyte antigen 96) [NCBI Gene 17087] {aka ESOP-1, MD-2, MD2}, MYD88 (MYD88 innate immune signal transduction adaptor) [NCBI Gene 4615] {aka IMD68, MYD88D, WM1}, LY96 (lymphocyte antigen 96) [NCBI Gene 23643] {aka ESOP-1, MD-2, MD2, ly-96}, APOB (apolipoprotein B) [NCBI Gene 338] {aka FCHL2, FLDB, LDLCQ4, apoB-100, apoB-48}, NFATC2 (nuclear factor of activated T cells 2) [NCBI Gene 4773] {aka JCOSL, NFAT1, NFATP}, CST12P (cystatin 12, pseudogene) [NCBI Gene 106478911] {aka Cst, Ctes4, E2}, Hnf1b (HNF1 homeobox B) [NCBI Gene 21410] {aka HNF-1-beta, HNF-1B, HNF-1Beta, Hnf1beta, LFB3, Tcf-2}, IL4 (interleukin 4) [NCBI Gene 3565] {aka BCGF-1, BCGF1, BSF-1, BSF1, IL-4}, Ahr (aryl-hydrocarbon receptor) [NCBI Gene 11622] {aka Ah, Ahh, Ahre, In, bHLHe76}, Gm33055 (predicted gene, 33055) [NCBI Gene 102635809], TLR4 (toll like receptor 4) [NCBI Gene 7099] {aka ARMD10, CD284, TLR-4, TOLL}, Hotair (HOX transcript antisense RNA (non-protein coding)) [NCBI Gene 100503872] {aka Gm16258}, C16orf82 (chromosome 16 open reading frame 82) [NCBI Gene 162083] {aka TNT}, Il1b (interleukin 1 beta) [NCBI Gene 16176] {aka IL-1beta, Il-1b}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, Apob (apolipoprotein B) [NCBI Gene 238055] {aka Apo B-100, apob-100, apob-48}, Cd86 (CD86 antigen) [NCBI Gene 12524] {aka B7, B7-2, B7.2, B70, CLS1, Cd28l2}, Itgax (integrin alpha X) [NCBI Gene 16411] {aka Cd11c, Cr4, N418}, Nr4a2 (nuclear receptor subfamily 4, group A, member 2) [NCBI Gene 18227] {aka HZF-3, NOT, Nurr1, RNR-1, TINOR, TINUR}, Tlr4 (toll-like receptor 4) [NCBI Gene 21898] {aka Lps, Ly87, Ran/M1, Rasl2-8}, H2 (histocompatibility-2, MHC) [NCBI Gene 111364] {aka H-2, MHC-II}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, Cd80 (CD80 antigen) [NCBI Gene 12519] {aka B71, Cd28l, Ly-53, Ly53, MIC17, TSA1}, Itgam (integrin alpha M) [NCBI Gene 16409] {aka CD11b/CD18, CR3, CR3A, Cd11b, F730045J24Rik, Ly-40}, Cd14 (CD14 antigen) [NCBI Gene 12475], MALAT1 (metastasis associated lung adenocarcinoma transcript 1) [NCBI Gene 378938] {aka HCN, LINC00047, NCRNA00047, NEAT2, PRO2853, miPEP-52}, IL18 (interleukin 18) [NCBI Gene 3606] {aka IGIF, IL-18, IL-1g, IL1F4}, CYP1B1-AS1 (CYP1B1 antisense RNA 1) [NCBI Gene 285154] {aka C2orf58}
- **Diseases:** DC (MESH:D054221), AS (MESH:D050197), hypertension (MESH:D006973), MI (MESH:D009203), VEC injury (MESH:D057772), coronary artery disease (MESH:D003324), necrotic (MESH:D009336), atherosclerotic plaque (MESH:D058226), tissue injury (MESH:D017695), fibrosis (MESH:D005355), inflammation (MESH:D007249), injury (MESH:D014947), panvascular diseases (MESH:D004194), coronary heart disease (MESH:D003327), ACS (MESH:D054058), cancer (MESH:D009369), calcification (MESH:D002114), VEC (MESH:D014652), rupture (MESH:D012421), diabetes (MESH:D003920), stenosis (MESH:D003251), ischemia (MESH:D007511), hypoxia (MESH:D000860)
- **Chemicals:** crystal violet (MESH:D005840), C8470 (-), haematoxylin (MESH:D006416), penicillin (MESH:D010406), glutamine (MESH:D005973), CO2 (MESH:D002245), agarose (MESH:D012685), paraformaldehyde (MESH:C003043), lipid (MESH:D008055), LPS (MESH:D008070), polyvinylidene fluoride (MESH:C024865), Tween-20 (MESH:D011136), polyacrylamide (MESH:C016679), streptomycin (MESH:D013307), Coomassie Brilliant Blue (MESH:C004692), water (MESH:D014867), Oil Red O (MESH:C011049), TRIzol (MESH:C411644), 1-palmitoyl-2-arachidonyl-sn-glycero-3-phosphorylcholine (MESH:C468114), SDS (MESH:D012967), CFSE (MESH:C087165), cholesterol (MESH:D002784)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** C-25 C
- **Cell lines:** C57BL/6J — Mus musculus (Mouse), Transformed cell line (CVCL_C0MW)

## Full text

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## Figures

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## References

44 references — full list in the complete paper: https://tomesphere.com/paper/PMC12948649/full.md

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Source: https://tomesphere.com/paper/PMC12948649