# Gut Microbiota Alterations in Hypothyroidism: A Pilot Study Revealing Increased Abundance of Specific Bacterial Genera

**Authors:** Zahra Hoseini Tavassol, Farima Farsi, Fateme Ettehad-Marvasti, Hanieh-Sadat Ejtahed, Shirin Hasani-Ranjbar

PMC · DOI: 10.1155/jnme/9988966 · Journal of Nutrition and Metabolism · 2026-02-27

## TL;DR

This pilot study found that people with hypothyroidism have higher levels of certain gut bacteria, suggesting a possible link between gut health and thyroid function.

## Contribution

The study identifies specific bacterial genera associated with hypothyroidism, offering new insights into gut-thyroid interactions.

## Key findings

- Hypothyroid patients had significantly higher levels of Bacteroides, Bifidobacterium, Escherichia, Fecalibacterium, and Prevotella.
- No significant differences were found in Akkermansia, Lactobacillus, or the Bacteroides/Prevotella ratio.
- The study suggests gut microbiota may influence thyroid regulation, warranting further research.

## Abstract

Hypothyroidism (HT) is a prevalent thyroid disorder characterized by insufficient thyroid hormone production, leading to metabolic complications. Emerging research suggests a link between gut microbiota and thyroid regulation, positing that alterations in gut bacterial populations may contribute to HT’s development and progression. This study aimed to investigate these associations by comparing gut microbiota compositions between individuals with HT and healthy adults, potentially refining diagnostic tools and therapeutic strategies.

In this pilot study conducted between 2019 and 2023, 15 hypothyroid patients and 15 age‐ and gender‐matched healthy controls participated in the study. Exclusion criteria were applied to eliminate confounding factors. Anthropometric data were collected, and stool samples underwent microbial analysis. Total bacterial DNA was extracted, and quantitative real‐time PCR targeting 16S rRNA genes across eight bacterial genera was performed. The Mann–Whitney U test was used for statistical analyses.

No significant differences were observed in baseline demographic and anthropometric characteristics between groups. However, hypothyroid patients exhibited significantly elevated levels of Bacteroides, Bifidobacterium, Escherichia, Fecalibacterium, and Prevotella (p values < 0.001–0.030). No significant differences were found in levels of Akkermansia, Lactobacillus, or in the Bacteroides/Prevotella ratio.

This pilot study provides preliminary indications of a possible role of gut microbiota in the pathophysiology of HT. Variations in bacterial composition suggest a significant influence of gut health on thyroid regulation. Future studies with larger cohorts are needed to explore the biological pathways linking the gut microbiome to thyroid function, which may lead to novel microbiota‐targeted therapeutic approaches.

## Linked entities

- **Diseases:** hypothyroidism (MONDO:0005420)

## Full-text entities

- **Genes:** TPO (thyroid peroxidase) [NCBI Gene 7173] {aka MSA, TDH2A, TPX}, TG (thyroglobulin) [NCBI Gene 7038] {aka AITD3, TGN}
- **Diseases:** metabolic (MESH:D008659), thyroid-related disorders (MESH:D013966), cognitive disturbances (MESH:D003072), Hashimoto's thyroiditis (MESH:D050031), intestinal bacterial overgrowth (MESH:D001765), Thyroid disorders (MESH:D013959), autoimmune thyroiditis (MESH:D013967), type 2 diabetes (MESH:D003924), obese (MESH:D009765), inflammatory bowel disease (MESH:D015212), autoimmune conditions (MESH:D001327), renal or liver disorders (MESH:D017093), hyperthyroidism (MESH:D006980), overweight (MESH:D050177), cardiovascular disease (MESH:D002318), cancer (MESH:D009369), gastrointestinal diseases (MESH:D005767), Dysbiosis (MESH:D064806), COVID-19 (MESH:D000086382), gut-thyroid axis dysfunction (MESH:C566610), inflammation (MESH:D007249), autoimmune HT (MESH:C562768), systemic illness (MESH:D012140), HT (MESH:D007037), acute or chronic diarrhea (MESH:D001930)
- **Chemicals:** acetate (MESH:D000085), T3 (MESH:D014284), dicarboxylic acids (MESH:D003998), SCFAs (MESH:D005232), lipid (MESH:D008055), iodine (MESH:D007455), butyrate (MESH:D002087), propionate (MESH:D011422), selenium (MESH:D012643), fatty acid (MESH:D005227), FT4 (-), levothyroxine (MESH:D013974), bile acid (MESH:D001647)
- **Species:** gut metagenome (species) [taxon 749906], Bacteroidia (class) [taxon 200643], Mediterraneibacter torques (species) [taxon 33039], Parasutterella (genus) [taxon 577310], Bacillota (clostridial firmicutes, phylum) [taxon 1239], Phascolarctobacterium (genus) [taxon 33024], Akkermansia (genus) [taxon 239934], Prevotella (genus) [taxon 838], Bacteroides (genus) [taxon 816], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Faecalibacterium prausnitzii (species) [taxon 853], Homo sapiens (human, species) [taxon 9606], Lactobacillus (genus) [taxon 1578], Bifidobacterium (genus) [taxon 1678], Akkermansia muciniphila (species) [taxon 239935], Anaerobutyricum hallii (species) [taxon 39488], Escherichia coli (E. coli, species) [taxon 562]

## Full text

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## References

36 references — full list in the complete paper: https://tomesphere.com/paper/PMC12946809/full.md

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Source: https://tomesphere.com/paper/PMC12946809