# Uncovering mitochondrial dynamics–related genes as potential diagnostic biomarkers for acute myocardial infarction

**Authors:** Xiaolin Yue, Jinlei Wu, Xueyun Shi, Youshun Xu, Xiaowei Han, Ruijian Li

PMC · DOI: 10.3389/fcvm.2026.1755024 · Frontiers in Cardiovascular Medicine · 2026-02-13

## TL;DR

This study identifies COX7B and SNORD54 as potential biomarkers for diagnosing acute myocardial infarction, linked to mitochondrial dynamics and immune cell activity.

## Contribution

The study introduces COX7B and SNORD54 as novel mitochondrial dynamics-related biomarkers for acute myocardial infarction.

## Key findings

- COX7B and SNORD54 show strong diagnostic performance for acute myocardial infarction.
- Monocytes and natural killer cells are key cell types associated with these biomarkers.
- Reduced expression of COX7B and SNORD54 is confirmed in AMI tissues.

## Abstract

Mitochondrial dynamics play a vital role in maintaining cardiac energy balance and cellular homeostasis. Increasing evidence suggests that dysregulated mitochondrial dynamics contribute to the development of acute myocardial infarction (AMI). However, the underlying molecular mechanisms and related biomarkers remain largely unclear.

In this study, transcriptomic profiling of AMI and control samples was used to identify mitochondrial dynamics-associated genes (MD-RGs) linked to AMI progression. Based on the expression of 50 curated MD-RGs, AMI samples were classified into molecular subgroups using single-sample gene set enrichment analysis (ssGSEA). Differentially expressed genes were integrated into multiple machine learning models to identify potential diagnostic biomarkers. Expression validation and receiver operating characteristic (ROC) analyses were performed to assess diagnostic accuracy. Functional enrichment, immune infiltration, and N6-methyladenosine (m6A) regulator correlation analyses were conducted to explore biological mechanisms. Key cell types were identified through single-cell RNA sequencing (scRNA-seq) analysis, and biomarker expression was validated by reverse transcription quantitative PCR (RT-qPCR) in patient-derived samples.

Two genes, COX7B and SNORD54, were identified as novel biomarkers associated with mitochondrial dynamics in AMI. ROC and nomogram analyses confirmed their strong diagnostic performance. Enrichment analysis revealed shared pathways including oxidative phosphorylation and Notch signaling, while six m6A regulators (HNRNPC, KIAA1429, METTL3, WTAP, YTHDC1, and YTHDC2) were markedly downregulated, suggesting possible epigenetic involvement. RT-qPCR confirmed reduced expression of COX7B and SNORD54 in AMI tissues. Single-cell analysis further identified monocytes and natural killer (NK) cells as key cell types linked to these biomarkers.

Collectively, this study identifies COX7B and SNORD54 as mitochondrial dynamics-related biomarkers and highlights the role of monocytes and NK cells in AMI, offering new insight into mitochondrial dysfunction-driven cardiac injury and potential targets for precision diagnosis and therapy.

## Linked entities

- **Genes:** COX7B (cytochrome c oxidase subunit 7B) [NCBI Gene 1349], SNORD54 (small nucleolar RNA, C/D box 54) [NCBI Gene 26795], HNRNPC (heterogeneous nuclear ribonucleoprotein C) [NCBI Gene 3183], VIRMA (vir like m6A methyltransferase associated) [NCBI Gene 25962], METTL3 (methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit) [NCBI Gene 56339], WTAP (WT1 associated protein) [NCBI Gene 9589], YTHDC1 (YTH N6-methyladenosine RNA binding protein C1) [NCBI Gene 91746], YTHDC2 (YTH N6-methyladenosine RNA binding protein C2) [NCBI Gene 64848]
- **Diseases:** acute myocardial infarction (MONDO:0004781)

## Full-text entities

- **Genes:** WTAP (WT1 associated protein) [NCBI Gene 9589] {aka Mum2}, DOCK2 (dedicator of cytokinesis 2) [NCBI Gene 1794] {aka IMD40}, CLC (Charcot-Leyden crystal galectin) [NCBI Gene 1178] {aka GAL10, Gal-10, LGALS10, LGALS10A, LPPL_HUMAN}, FTO (FTO alpha-ketoglutarate dependent dioxygenase) [NCBI Gene 79068] {aka ALKBH9, BMIQ14, GDFD, IFEX9}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, MIR558 (microRNA 558) [NCBI Gene 693143] {aka MIRN558, hsa-mir-558}, MAPK14 (mitogen-activated protein kinase 14) [NCBI Gene 1432] {aka CSBP, CSBP1, CSBP2, CSPB1, EXIP, Mxi2}, KCNQ1OT1 (KCNQ1 opposite strand/antisense transcript 1) [NCBI Gene 10984] {aka KCNQ1-AS2, KCNQ10T1, Kncq1, KvDMR1, KvLQT1-AS, LIT1}, ALKBH5 (alkB homolog 5, RNA demethylase) [NCBI Gene 54890] {aka ABH5, OFOXD, OFOXD1}, MIR607 (microRNA 607) [NCBI Gene 693192] {aka MIRN607, hsa-mir-607}, OPA1 (OPA1 mitochondrial dynamin like GTPase) [NCBI Gene 4976] {aka BERHS, MGM1, MTDPS14, MTDPS14A, MTDPS14B, NPG}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, F3 (coagulation factor III, tissue factor) [NCBI Gene 2152] {aka CD142, TF, TFA}, METTL14 (methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit) [NCBI Gene 57721] {aka hMETTL14}, MFN2 (mitofusin 2) [NCBI Gene 9927] {aka CMT2A, CMT2A2, CMT2A2A, CMT2A2B, CPRP1, HMSN6A}, SNORD54 (small nucleolar RNA, C/D box 54) [NCBI Gene 26795] {aka RNU54, U54}, ATF4 (activating transcription factor 4) [NCBI Gene 468] {aka CREB-2, CREB2, TAXREB67, TXREB}, NAMPT (nicotinamide phosphoribosyltransferase) [NCBI Gene 10135] {aka 1110035O14Rik, PBEF, PBEF1, VF, VISFATIN}, RN7SL368P (RNA, 7SL, cytoplasmic 368, pseudogene) [NCBI Gene 106479357], MIR26A1 (microRNA 26a-1) [NCBI Gene 407015] {aka MIR26A, MIRN26A1, mir-26a-1}, MAPK8 (mitogen-activated protein kinase 8) [NCBI Gene 5599] {aka JNK, JNK-46, JNK1, JNK1A2, JNK21B1/2, PRKM8}, YTHDC1 (YTH N6-methyladenosine RNA binding protein C1) [NCBI Gene 91746] {aka YT521, YT521-B}, NEAT1 (nuclear paraspeckle assembly transcript 1) [NCBI Gene 283131] {aka LINC00084, NCRNA00084, TP53LC15, TncRNA, VINC}, LINC01235 (long intergenic non-protein coding RNA 1235) [NCBI Gene 401492], ZC3H13 (zinc finger CCCH-type containing 13) [NCBI Gene 23091] {aka KIAA0853, Xio}, METTL3 (methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit) [NCBI Gene 56339] {aka IME4, M6A, MT-A70, Spo8, hMETTL3}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, PPARGC1A (PPARG coactivator 1 alpha) [NCBI Gene 10891] {aka LEM6, PGC-1(alpha), PGC-1alpha, PGC-1v, PGC1, PGC1A}, EBLN3P (endogenous Bornavirus like nucleoprotein 3, pseudogene) [NCBI Gene 100506710] {aka EBLN3}, SNORA24 (small nucleolar RNA, H/ACA box 24) [NCBI Gene 677809] {aka ACA24, SNORA24A}, YTHDF1 (YTH N6-methyladenosine RNA binding protein F1) [NCBI Gene 54915] {aka C20orf21, DF1}, PRDX1 (peroxiredoxin 1) [NCBI Gene 5052] {aka MSP23, NKEF-A, NKEFA, PAG, PAGA, PAGB}, CEBPG (CCAAT enhancer binding protein gamma) [NCBI Gene 1054] {aka GPE1BP, IG/EBP-1}, SNORD15B (small nucleolar RNA, C/D box 15B) [NCBI Gene 114599] {aka RNU15B, U15B}, VIRMA (vir like m6A methyltransferase associated) [NCBI Gene 25962] {aka KIAA1429, MSTP054, fSAP121}, YTHDF2 (YTH N6-methyladenosine RNA binding protein F2) [NCBI Gene 51441] {aka CAHL, DF2, HGRG8, NY-REN-2}, COX7B (cytochrome c oxidase subunit 7B) [NCBI Gene 1349] {aka APLCC, LSDMCA2}, MGST3 (microsomal glutathione S-transferase 3) [NCBI Gene 4259] {aka GST-3, GST-III}, HNRNPC (heterogeneous nuclear ribonucleoprotein C) [NCBI Gene 3183] {aka HNRNP, HNRPC, MRD74, SNRPC}, CCDC97 (coiled-coil domain containing 97) [NCBI Gene 90324], ATG12 (autophagy related 12) [NCBI Gene 9140] {aka APG12, APG12L, FBR93, HAPG12}, CYP4F3 (cytochrome P450 family 4 subfamily F member 3) [NCBI Gene 4051] {aka CPF3, CYP4F, CYPIVF3, LTB4H}, YTHDC2 (YTH N6-methyladenosine RNA binding protein C2) [NCBI Gene 64848] {aka CAHL, hYTHDC2}, KDM5A (lysine demethylase 5A) [NCBI Gene 5927] {aka NEDEHC, RBBP-2, RBBP2, RBP2}, DNM1L (dynamin 1 like) [NCBI Gene 10059] {aka DLP1, DRP1, DVLP, DYMPLE, EMPF, EMPF1}
- **Diseases:** cardiac damage (MESH:D006331), coronary artery disease (MESH:D003324), cardiac hypertrophy (MESH:D006332), HF (MESH:D006333), infarct (MESH:D007238), embolization (MESH:D004617), nerve degeneration (MESH:D009410), endothelial (MESH:D005642), necrosis (MESH:D009336), hyperplasia (MESH:D006965), atherosclerotic plaques (MESH:D058226), immune dysregulation (OMIM:614878), atherosclerosis (MESH:D050197), death (MESH:D003643), thrombus (MESH:D013927), I/R injury (MESH:D015427), ischemic injury (MESH:D017202), cardiovascular disease (MESH:D002318), AMI (MESH:D009203), myocardial damage (MESH:D009202), arrhythmias (MESH:D001145), hypoxia (MESH:D000860), metabolic disorders (MESH:D008659), ischemia (MESH:D007511), Mitochondrial dysfunction (MESH:D028361), myocardial fibrosis (MESH:D005355), inflammation (MESH:D007249), ventricular dysfunction (MESH:D018754), chromosome-defective (MESH:D002869), AD (MESH:D000544)
- **Chemicals:** Glutathione (MESH:D005978), m6A (MESH:C005955), ROS (MESH:D017382), calcium (MESH:D002118), 3'-Azido-3'- deoxythymidine (MESH:D015215), silica (MESH:D012822), hydrogen peroxide (MESH:D006861), Corydalis hendersonii (-), 1-Methyl-4-phenyl-2,3-dihydropyridinium (MESH:C044755), ethanol (MESH:D000431), harmine (MESH:D006247), alkaloids (MESH:D000470), chrysin (MESH:C043561), N6-methyladenosine (MESH:C010223), quercetin (MESH:D011794), EDTA (MESH:D004492)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12946055/full.md

## References

51 references — full list in the complete paper: https://tomesphere.com/paper/PMC12946055/full.md

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Source: https://tomesphere.com/paper/PMC12946055