# Optimized Propagation and Purification Protocols for Large-Scale Production of Rhinovirus C

**Authors:** Jason Kaiya, Mark K. Devries, James E. Gern, Yury A. Bochkov

PMC · DOI: 10.3390/v18020169 · Viruses · 2026-01-28

## TL;DR

This paper describes optimized methods to grow and purify large amounts of Rhinovirus C, which could help in developing treatments and vaccines.

## Contribution

The study introduces a robust system for large-scale RV-C production and recommends a lipase-based purification method for high-quality virus preparations.

## Key findings

- RV-C15a yields were significantly lower in suspension cultures compared to adherent cultures.
- Lipase treatment followed by ultracentrifugation produced highly pure and concentrated virus preparations.
- Infection timing and calcium supplementation improved virus production in adherent cultures.

## Abstract

Background: Rhinovirus C (RV-C) is one of three species of rhinoviruses (RVs), which cause the common cold, preschool wheezing illnesses and exacerbations of asthma. RV-C types are more virulent, especially in children, but progress in developing treatments is limited by difficulties in generating high-titer virus preparations. The goals of this study were to optimize methods for large-scale production and purification of RV-C to facilitate structure and immune response studies. Methods: We optimized protocols for the propagation and purification of RV-C15a, a clinical isolate adapted to HeLa-E8 cells stably expressing virus receptor CDHR3. We compared virus yields in adherent and suspension cultures, evaluated the effects of calcium supplementation and infection timing, and tested multiple purification strategies, including ultracentrifugation, dialysis, and lipase treatment. Results: RV-C15a yields were significantly lower in suspension vs. adherent cultures despite comparable virus binding and entry, suggesting post-entry replication limitations in suspended cells. In adherent cultures, infecting soon after cell seeding and calcium supplementation reduced the time of virus production and modestly improved virus progeny yields. Surface CDHR3 expression declined over time, potentially restricting viral spread. Among purification methods, lipase treatment of infected cell lysates followed by ultracentrifugation produced highly pure and concentrated virus preparations suitable for structural and immunological applications, with high yields. Conclusions: We present a robust system for large-scale RV-C15a production in adherent HeLa-E8 cells and recommend a lipase-based purification method as a rapid and effective approach for producing high-quality viral preparations. These advances will support structural studies and accelerate the development of RV-C-targeted therapeutics and vaccines.

## Linked entities

- **Proteins:** CDHR3 (cadherin related family member 3)
- **Chemicals:** calcium (PubChem CID 5460341)
- **Diseases:** common cold (MONDO:0005709), asthma (MONDO:0004979)
- **Species:** Rhinovirus C (taxon 463676)

## Full-text entities

- **Genes:** CDHR3 (cadherin related family member 3) [NCBI Gene 222256] {aka CDH28}, RNASE1 (ribonuclease A family member 1, pancreatic) [NCBI Gene 6035] {aka RAC1, RIB1, RNS1}, NKS1 (natural killer cell susceptibility 1) [NCBI Gene 4819] {aka EC-1, EC1}
- **Diseases:** airway diseases (MESH:D029424), common cold (MESH:D003139), respiratory illnesses (MESH:D012140), injury to (MESH:D014947), Respiratory infections (MESH:D012141), asthma (MESH:D001249), wheezing (MESH:D012135), RV-C (OMIM:211750), cold (MESH:D000067390), infection (MESH:D007239)
- **Chemicals:** phospholipids (MESH:D010743), copper (MESH:D003300), calcium chloride (MESH:D002122), amyl acetate (MESH:C005716), NaCl (MESH:D012965), carbon (MESH:D002244), Streptomycin (MESH:D013307), EDTA (MESH:D004492), polyethylene glycol (MESH:D011092), lipid (MESH:D008055), Sucrose (MESH:D013395), CO2 (MESH:D002245), L-glutamine (MESH:D005973), PEG 6000 (MESH:C000595215), Ca (MESH:D002118), Mg (MESH:D008274), A (MESH:D001151), PBS (MESH:D007854), Tween-20 (MESH:D011136), Penicillin (MESH:D010406), Pluronic F68 (MESH:D020442), Alexa Fluor 633 (-), N-lauroylsarcosine (MESH:C025231), uranyl acetate (MESH:C005460), amino acids (MESH:D000596)
- **Species:** Rhinovirus C (no rank) [taxon 463676], Enterovirus (genus) [taxon 12059], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** F200C, rs6967330, C in 2
- **Cell lines:** H1-HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_3334), HBEC3-KT — Homo sapiens (Human), Telomerase immortalized cell line (CVCL_X491), HeLa-E8 — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_ZF12), HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030), WI-38 — Homo sapiens (Human), Finite cell line (CVCL_0579), -C15a — Homo sapiens (Human), Lung squamous cell carcinoma, Cancer cell line (CVCL_H624)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12945259/full.md

## References

27 references — full list in the complete paper: https://tomesphere.com/paper/PMC12945259/full.md

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Source: https://tomesphere.com/paper/PMC12945259