# Elm Blunervirus 1: A Novel Hexapartite Blunervirus Infecting Ulmus parvifolia in China

**Authors:** Yanxiang Wang, Lifeng Zhai, Junjie Xiang, Wanqing Chen, Jingjing Li, Kai Yin, Xiaoshan Shi, Junming Tu, Xian Xia, Ying Wang, Jianyu Bai

PMC · DOI: 10.3390/v18020266 · Viruses · 2026-02-20

## TL;DR

A new blunervirus, ElmBlV1, was discovered infecting elm trees in China, expanding the known diversity of this virus group.

## Contribution

The discovery of ElmBlV1, a novel hexapartite blunervirus infecting Ulmus parvifolia in China, expands the genomic and biological understanding of the Blunervirus genus.

## Key findings

- ElmBlV1 has six RNA segments, including two additional genomic components not previously reported in blunerviruses.
- ElmBlV1 proteins show amino acid identities ranging from 25.9% to 64.2% compared to known blunerviruses.
- Phylogenetic analysis shows ElmBlV1 is most closely related to blueberry necrotic ring blotch virus.

## Abstract

The genus Blunervirus comprises plant viruses that infect a diverse range of plants, but no blunervirus has been reported infecting elm trees (Ulmus parvifolia) in China to date. Using high-throughput sequencing and reverse-transcription PCR assays, a novel blunervirus, tentatively named elm blunervirus 1 (ElmBlV1), was identified from a symptomatic elm plant (Ulmus parvifolia) in China. The genome of ElmBlV1 harbors canonical molecular features of blunerviruses and comprises six RNA segments (RNAs1–6), with RNA5 and 6 being two additional genomic components not reported in known blunerviruses. Sequence analyses revealed amino acid (aa) identity of ElmBlV1 proteins ranging from 25.9% (polyprotein encoded by RNA1) to 64.2% (movement protein encoded by RNA4) relative to reported blunerviruses and include five orphan open reading frames. Phylogenetically, ElmBlV1 is most closely related to blueberry necrotic ring blotch virus. Furthermore, ElmBlV1 P37 localizes to both plasmodesmata and the nucleus. Additionally, the RNA reads mapping revealed high read coverage was observed on RNAs3–4 for this virus. To our knowledge, this is the first report of a blunervirus infecting an elm tree in China. Our results enrich the diversity of known viruses in the genus of Blunervirus and expand our understanding of their genomic characteristics and molecular biology.

## Linked entities

- **Proteins:** CCNH (cyclin H)
- **Species:** Ulmus parvifolia (taxon 63058)

## Full-text entities

- **Genes:** HFM1 (helicase for meiosis 1) [NCBI Gene 164045] {aka MER3, POF9, SEC63D1, Si-11, Si-11-6, helicase}, CD8B (CD8 subunit beta) [NCBI Gene 926] {aka CD8B1, CD8beta, LEU2, LY3, LYT3, Ly-3}, CHP1 (calcineurin like EF-hand protein 1) [NCBI Gene 11261] {aka CHP, SLC9A1BP, SPAX9, Sid470p, p22, p24}, RSS [NCBI Gene 140821], DDX5 (DEAD-box helicase 5) [NCBI Gene 1655] {aka G17P1, HLR1, HUMP68, p68}, H2BC21 (H2B clustered histone 21) [NCBI Gene 8349] {aka GL105, H2B, H2B-GL105, H2B.1, H2BE, H2BFQ}, RPP14 (ribonuclease P/MRP subunit p14) [NCBI Gene 11102] {aka P14}, PLEK (pleckstrin) [NCBI Gene 5341] {aka P47, PLEK1}
- **Diseases:** leaf mosaic (MESH:C537822), DED (MESH:D054078), vascular wilt disease (MESH:D014652), injury to (MESH:D014947), elm disease (MESH:D004194), chlorosis (MESH:D000747), OTU (MESH:D010051), infections (MESH:D007239), Virus (MESH:D014777)
- **Chemicals:** SP (MESH:C000604007), Trizol (MESH:C411644), CTAB (MESH:D000077286), OL865294 (-)
- **Species:** Hibiscus green spot virus 2 (no rank) [taxon 1513278], Tobacco mosaic virus (no rank) [taxon 12242], Turnip vein-clearing virus (no rank) [taxon 29272], Ulmus parvifolia (Chinese elm, species) [taxon 63058], Citrus tristeza virus (no rank) [taxon 12162], Tomato bushy stunt virus (no rank) [taxon 12145], Alfalfa dwarf virus (no rank) [taxon 998864], Lettuce necrotic yellows virus (no rank) [taxon 32612], Blunervirus (genus) [taxon 2022856], Citrus leprosis virus C (no rank) [taxon 347219], Emaravirus fici (species) [taxon 1980427], Tobacco ringspot virus (no rank) [taxon 12282], Elm carlavirus (species) [taxon 2015551], Ulmus americana (American elm, species) [taxon 29740], Agrobacterium tumefaciens (species) [taxon 358], Tomato fruit blotch virus (no rank) [taxon 2762435], Citrus tatter leaf virus (no rank) [taxon 33759], Nicotiana benthamiana (species) [taxon 4100], Hibiscus yellow blotch virus (no rank) [taxon 2809748], Moloney murine leukemia virus (no rank) [taxon 11801], Kitaviridae (family) [taxon 2560061], Emaravirus (genus) [taxon 675845], Pear chlorotic leaf spot-associated virus (no rank) [taxon 2603627], Elm mottle virus (no rank) [taxon 56486], Homo sapiens (human, species) [taxon 9606], Actinidia chlorotic ringspot-associated virus (no rank) [taxon 1776763], Blueberry necrotic ring blotch virus (no rank) [taxon 1094249], Cherry leaf roll virus (no rank) [taxon 12615], Cryptosporidium parvum (species) [taxon 5807], Solanum lycopersicum (tomato, species) [taxon 4081], Tombusvirus (genus) [taxon 12141], Cytorhabdovirus hordei (no rank) [taxon 1985699]
- **Mutations:** glycine-tryptophan

## Full text

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## Figures

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## References

56 references — full list in the complete paper: https://tomesphere.com/paper/PMC12945218/full.md

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Source: https://tomesphere.com/paper/PMC12945218