# Dissecting Cell Death Pathways in Influenza A Virus Infection: Comparative Insights from Human Models

**Authors:** Ngoc Mai Khoi Nguyen, Alison C. West, Rebecca L. Ambrose, Michelle D. Tate

PMC · DOI: 10.3390/v18020246 · Viruses · 2026-02-14

## TL;DR

This review compares how different human cell models respond to influenza by triggering cell death, aiming to improve understanding of the virus's effects and treatment strategies.

## Contribution

The paper provides a systematic comparison of programmed cell death in human-relevant influenza models, highlighting model-specific differences and translational gaps.

## Key findings

- Human models show distinct pathway activation and cell-type vulnerability compared to murine models.
- Bystander effects and spatial dynamics vary across experimental platforms.
- Gaps remain in comparative analyses across viral strains and model systems.

## Abstract

Influenza A virus remains a major global health threat, causing annual epidemics and occasional pandemics. Programmed cell death, including apoptosis, pyroptosis, and necroptosis, with emerging evidence for ferroptosis, plays a dual role in influenza pathogenesis, both limiting viral replication and contributing to immunopathology. Most mechanistic insights have been derived from murine genetic models, which have been invaluable for establishing causal roles of these pathways. However, murine models and cancer-derived cell lines differ significantly from human physiology. This review systematically compares influenza-induced programmed cell death across human-relevant platforms, including primary cells, immortalized non-cancerous lines, co-cultures, organoids, and precision-cut lung slices. The increasing complexity of these models reveals distinct aspects of pathway activation, bystander effects, cell-type vulnerability, and spatial dynamics. We highlight critical divergences between model systems, identify gaps in comparative analyses across viral strains and experimental platforms, and outline future directions leveraging advanced model systems, multi-omics, and functional genomics to enhance translational relevance and guide the development of host-directed therapies.

## Linked entities

- **Diseases:** influenza (MONDO:0005812)
- **Species:** Homo sapiens (taxon 9606), Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Gpx4 (glutathione peroxidase 4) [NCBI Gene 625249] {aka GPx-4, GSHPx-4, PHGPx, mtPHGPx, snGPx}, PYCARD (PYD and CARD domain containing) [NCBI Gene 29108] {aka ASC, CARD5, TMS, TMS-1, TMS1}, NLRP1 (NLR family pyrin domain containing 1) [NCBI Gene 22861] {aka AIADK, CARD7, CIDED, CLR17.1, DEFCAP, DEFCAP-L/S}, NINJ1 (ninjurin 1) [NCBI Gene 4814] {aka NIN1, NINJURIN, hNINJ1}, CASP5 (caspase 5) [NCBI Gene 838] {aka ICE(rel)III, ICEREL-III, ICH-3}, BID (BH3 interacting domain death agonist) [NCBI Gene 637] {aka FP497}, CASP1 (caspase 1) [NCBI Gene 834] {aka ICE, IL1BC, P45}, FAS (Fas cell surface death receptor) [NCBI Gene 355] {aka ALPS1A, APO-1, APT1, CD95, FAS1, FASTM}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, BCL2L1 (BCL2 like 1) [NCBI Gene 598] {aka BCL-XL/S, BCL2L, BCLX, Bcl-X, PPP1R52}, NLRP3 (NLR family pyrin domain containing 3) [NCBI Gene 114548] {aka AGTAVPRL, AII, AVP, C1orf7, CIAS1, CLR1.1}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, IVNS1ABP (influenza virus NS1A binding protein) [NCBI Gene 10625] {aka ARA3, FLARA3, HSPC068, IMD70, KLHL39, ND1}, CXCL10 (C-X-C motif chemokine ligand 10) [NCBI Gene 3627] {aka C7, IFI10, INP10, IP-10, SCYB10, crg-2}, RIPK1 (receptor interacting serine/threonine kinase 1) [NCBI Gene 8737] {aka AIEFL, IMD57, RIP, RIP-1, RIP1}, CASP8 (caspase 8) [NCBI Gene 841] {aka ALPS2B, CAP4, Casp-8, FLICE, MACH, MCH5}, ZBP1 (Z-DNA binding protein 1) [NCBI Gene 81030] {aka C20orf183, DAI, DLM-1, DLM1}, GZMM (granzyme M) [NCBI Gene 3004] {aka LMET1, MET1}, PCBD1 (pterin-4 alpha-carbinolamine dehydratase 1) [NCBI Gene 5092] {aka DCOH, PCBD, PCD, PHS}, SLC25A6 (solute carrier family 25 member 6) [NCBI Gene 293] {aka AAC3, ANT, ANT 2, ANT 3, ANT3, ANT3Y}, CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 6387] {aka IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1}, TNFRSF1A (TNF receptor superfamily member 1A) [NCBI Gene 7132] {aka CD120a, FPF, TBP1, TNF-R, TNF-R-I, TNF-R55}, MCL1 (MCL1 apoptosis regulator, BCL2 family member) [NCBI Gene 4170] {aka BCL2L3, EAT, MCL1-ES, MCL1L, MCL1S, Mcl-1}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, BCL2L11 (BCL2 like 11) [NCBI Gene 10018] {aka BAM, BIM, BOD}, HSP90AA1 (heat shock protein 90 alpha family class A member 1) [NCBI Gene 3320] {aka EL52, HEL-S-65p, HSP86, HSP89A, HSP90A, HSP90N}, CXCR4 (C-X-C motif chemokine receptor 4) [NCBI Gene 7852] {aka CD184, D2S201E, FB22, HM89, HSY3RR, LCR1}, GPX4 (glutathione peroxidase 4) [NCBI Gene 2879] {aka GPx-4, GSHPx-4, MCSP, PHGPx, SMDS, snGPx}, HMGB1 (high mobility group box 1) [NCBI Gene 3146] {aka HMG-1, HMG1, HMG3, SBP-1}, AIMP1 (aminoacyl tRNA synthetase complex interacting multifunctional protein 1) [NCBI Gene 9255] {aka EMAP2, EMAPII, HLD3, SCYE1, p43}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, TRAF2 (TNF receptor associated factor 2) [NCBI Gene 7186] {aka MGC:45012, RNF117, TRAP, TRAP3}, BAK1 (BCL2 antagonist/killer 1) [NCBI Gene 578] {aka BAK, BAK-LIKE, BCL2L7, CDN1}, SMR3A (submaxillary gland androgen regulated protein 3A) [NCBI Gene 26952] {aka P-B1, PBI, PRL5, PROL5}, AGER (advanced glycosylation end-product specific receptor) [NCBI Gene 177] {aka RAGE, SCARJ1, sRAGE}, CASP4 (caspase 4) [NCBI Gene 837] {aka CASP-4, ICE(rel)II, ICEREL-II, ICH-2, Mih1, Mih1/TX}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, Il1b (interleukin 1 beta) [NCBI Gene 16176] {aka IL-1beta, Il-1b}, Mlkl (mixed lineage kinase domain-like) [NCBI Gene 74568] {aka 9130019I15Rik}, VDAC1 (voltage dependent anion channel 1) [NCBI Gene 7416] {aka PORIN, VDAC-1}, HSPA4 (heat shock protein family A (Hsp70) member 4) [NCBI Gene 3308] {aka APG-2, HEL-S-5a, HS24/P52, HSPH2, RY, hsp70}, Casp3 (caspase 3) [NCBI Gene 12367] {aka A830040C14Rik, AC-3, CASP-3, CC3, CPP-32, CPP32}, APAF1 (apoptotic peptidase activating factor 1) [NCBI Gene 317] {aka APAF-1, CED4}, FASLG (Fas ligand) [NCBI Gene 356] {aka ALPS1B, APT1LG1, APTL, CD178, CD95-L, CD95L}, SLC7A11 (solute carrier family 7 member 11) [NCBI Gene 23657] {aka CCBR1, xCT}, TNFSF10 (TNF superfamily member 10) [NCBI Gene 8743] {aka APO2L, Apo-2L, CD253, TANCR, TL2, TNLG6A}, BAX (BCL2 associated X, apoptosis regulator) [NCBI Gene 581] {aka BCL2L4}, PARP1 (poly(ADP-ribose) polymerase 1) [NCBI Gene 142] {aka ADPRT, ADPRT 1, ADPRT1, ARTD1, PARP, PARP-1}, Ninj1 (ninjurin 1) [NCBI Gene 18081], IL18 (interleukin 18) [NCBI Gene 3606] {aka IGIF, IL-18, IL-1g, IL1F4}, Mucin [NCBI Gene 100508689], Gsdmd (gasdermin D) [NCBI Gene 69146] {aka 1810036L03Rik, DF5L, Dfna5l, GsdmD-1, Gsdmdc1, M2-4}, GSDMD (gasdermin D) [NCBI Gene 79792] {aka DF5L, DFNA5L, FKSG10, GSDMDC1}, ACE2 (angiotensin converting enzyme 2) [NCBI Gene 59272] {aka ACEH}, MAP3K7 (mitogen-activated protein kinase kinase kinase 7) [NCBI Gene 6885] {aka CSCF, FMD2, MEKK7, TAK1, TGF1a}, TRADD (TNFRSF1A associated via death domain) [NCBI Gene 8717] {aka Hs.89862}, RIPK3 (receptor interacting serine/threonine kinase 3) [NCBI Gene 11035] {aka RIP3}, SIGLEC12 (sialic acid binding Ig like lectin 12) [NCBI Gene 89858] {aka S2V, SIGLECL1, SLG, Siglec-XII}, MLKL (mixed lineage kinase domain like pseudokinase) [NCBI Gene 197259] {aka hMLKL}, CYCS (cytochrome c, somatic) [NCBI Gene 54205] {aka CYC, HCS, THC4}
- **Diseases:** cytotoxicity (MESH:D064420), PMR (MESH:D005322), vascular injury (MESH:D057772), ALI (MESH:D004618), H1N1 infection (MESH:D007239), leukemia (MESH:D007938), deaths (MESH:D003643), epithelial injury (MESH:D009375), tissue injury (MESH:D017695), Lung Injury (MESH:D055370), acute lung injury (MESH:D055371), pulmonary edema (MESH:D011654), Cancer (MESH:D009369), Lung Organoid (MESH:D008171), mitochondrial dysfunction (MESH:D028361), respiratory complications (MESH:D012140), monocytic leukemia (MESH:D007951), IAV (MESH:D007251), inflammation (MESH:D007249), injury (MESH:D014947), ARDS (MESH:D012128), hemorrhagic (MESH:D006470)
- **Chemicals:** malondialdehyde (MESH:D008315), 1-methyl-tryptophan (MESH:C525396), K+ (MESH:D011188), PUFAs (MESH:D005231), necrostatin-1 (MESH:C507699), disulfiram (MESH:D004221), PCLS (-), ROS (MESH:D017382), agarose (MESH:D012685), cysteine (MESH:D003545), lipid (MESH:D008055), glutathione (MESH:D005978), dimethyl fumarate (MESH:D000069462), GSK'872 (MESH:C000633405), SA (MESH:D019158), PMA (MESH:D013755), oxygen (MESH:D010100), Ferrostatin-1 (MESH:C573944), FITC-dextran (MESH:C015219), iron (MESH:D007501)
- **Species:** Influenza B virus (no rank) [taxon 11520], H2N2 subtype (serotype) [taxon 114729], Homo sapiens (human, species) [taxon 9606], H7N9 subtype (serotype) [taxon 333278], Influenza A virus (no rank) [taxon 11320], H5N1 subtype (serotype) [taxon 102793], Bos taurus (bovine, species) [taxon 9913], H3N2 subtype (serotype) [taxon 119210], Enterovirus (genus) [taxon 12059], Mus musculus (house mouse, species) [taxon 10090], H1N1 subtype (serotype) [taxon 114727], Sus scrofa (pig, species) [taxon 9823], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049]
- **Cell lines:** Calu-3 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0609), THP-1 — Homo sapiens (Human), Childhood acute monocytic leukemia, Cancer cell line (CVCL_0006), MRC-5 — Homo sapiens (Human), Finite cell line (CVCL_0440), NHBE — Homo sapiens (Human), Transformed cell line (CVCL_S124), HBMEC — Homo sapiens (Human), Transformed cell line (CVCL_0307), fibroblasts — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_0594), HUVEC — Homo sapiens (Human), Finite cell line (CVCL_2959), A549 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023), HBEC3 — Homo sapiens (Human), Telomerase immortalized cell line (CVCL_X491), BEAS- — Homo sapiens (Human), Transformed cell line (CVCL_0168), HULEC — Homo sapiens (Human), Transformed cell line (CVCL_0A09)

## Full text

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## Figures

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## References

180 references — full list in the complete paper: https://tomesphere.com/paper/PMC12945023/full.md

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Source: https://tomesphere.com/paper/PMC12945023