# Prolyl tRNA Synthetase Is Required for Mammarenavirus Multiplication

**Authors:** Haydar Witwit, Pablo Ibanez, Ruifeng Zhou, Nathaniel Jackson, Ruby Escobedo, Beatrice Cubitt, Roaa Khafaji, Rachel Y. Sattler, Luis Martinez-Sobrido, Juan Carlos de la Torre

PMC · DOI: 10.3390/v18020202 · Viruses · 2026-02-04

## TL;DR

This study shows that halofuginone inhibits mammarenavirus multiplication by targeting prolyl-tRNA synthetase, offering a potential new antiviral treatment.

## Contribution

The study identifies prolyl-tRNA synthetase as a critical target for halofuginone's antiviral activity against mammarenaviruses.

## Key findings

- Halofuginone inhibits prolyl-tRNA synthetase activity, leading to amino acid starvation and translation inhibition.
- Halofuginone strongly inhibits Z budding activity in mammarenaviruses.
- Exogenous proline prevents halofuginone's anti-LCMV activity, confirming the role of prolyl-tRNA synthetase inhibition.

## Abstract

Several mammarenaviruses (MaAv), chiefly Lassa virus (LASV) in Western Africa and Junin virus (JUNV) in the Argentinean Pampas, cause severe disease in humans and pose important public health problems in their endemic regions. In addition, the globally distributed MaAv lymphocytic choriomeningitis virus (LCMV) is an underrecognized human pathogen of clinical significance, especially in congenital infections, and LCMV poses a serious risk for immunocompromised individuals. There are no FDA-approved MaAv vaccines or antivirals, and current anti-MaAv therapy is limited to an off-label use of ribavirin, whose efficacy remains controversial. This highlights an urgent unmet need for developing antivirals against human pathogenic MaAv. Halofuginone (HF), a derivative of the natural alkaloid febrifugine, has been shown to exhibit antiviral activity against several RNA viruses. Here, we present evidence that HF exhibits potent dose-dependent antiviral activity against LCMV, and against the hemorrhagic fever causing MaAv LASV and JUNV. HF binds to the bifunctional enzyme glutamyl-prolyl-tRNA synthetase 1 (EPRS1) and specifically inhibits its prolyl-tRNA synthetase (PRS) activity, resulting in translation inhibition via the amino acid starvation (AAS) response with preferential impact on proline-rich proteins. HF anti-LCMV activity was prevented by the addition of exogenous proline supporting that inhibition of PRS activity plays a critical role in the anti-MaAv activity of HF. We found that HF did not affect LCMV cell entry, modestly (twofold) reduced the activity of the virus ribonucleoprotein (vRNP), but strongly inhibited (>90%) Z budding activity, a process involving the Z proline-rich late domain motifs.

## Linked entities

- **Proteins:** EPRS1 (glutamyl-prolyl-tRNA synthetase 1), z (lethal)
- **Chemicals:** halofuginone (PubChem CID 400772), ribavirin (PubChem CID 37542)
- **Diseases:** Lassa fever (MONDO:0005820), Junin hemorrhagic fever (MONDO:0017874)

## Full-text entities

- **Genes:** EIF2AK4 (eukaryotic translation initiation factor 2 alpha kinase 4) [NCBI Gene 440275] {aka GCN2, PVOD2}, EIF2A (eukaryotic translation initiation factor 2A) [NCBI Gene 83939] {aka CDA02, EIF-2A, MST089, MSTP004, MSTP089}, GYPC (glycophorin C (Gerbich blood group)) [NCBI Gene 2995] {aka CD236, CD236R, GE, GPC, GPD, GYPD}, CHMP4B (charged multivesicular body protein 4B) [NCBI Gene 128866] {aka C20orf178, CHMP4A, CTPP3, CTRCT31, SNF7, SNF7-2}, RNF130 (ring finger protein 130) [NCBI Gene 55819] {aka G1RP, G1RZFP, GOLIATH, GP}, EIF2AK2 (eukaryotic translation initiation factor 2 alpha kinase 2) [NCBI Gene 5610] {aka PKR, PPP1R83, PRKR}, ATF4 (activating transcription factor 4) [NCBI Gene 468] {aka CREB-2, CREB2, TAXREB67, TXREB}, PDCD6IP (programmed cell death 6 interacting protein) [NCBI Gene 10015] {aka AIP1, ALIX, DRIP4, HP95, MCPH29}, AARS1 (alanyl-tRNA synthetase 1) [NCBI Gene 16] {aka AARS, CMT2N, DEE29, EIEE29, HDLS2, TTD8}, CCS (copper chaperone for superoxide dismutase) [NCBI Gene 9973], GP2 (glycoprotein 2) [NCBI Gene 2813] {aka ZAP75}, PATZ1 (POZ/BTB and AT hook containing zinc finger 1) [NCBI Gene 23598] {aka MAZR, PATZ, RIAZ, ZBTB19, ZNF278, ZSG}, CHMP2A (charged multivesicular body protein 2A) [NCBI Gene 27243] {aka BC-2, BC2, CHMP2, VPS2, VPS2A}, GBA3 (glucosylceramidase beta 3 (gene/pseudogene)) [NCBI Gene 57733] {aka CBG, CBGL1, GLUC, KLRP}, EPRS1 (glutamyl-prolyl-tRNA synthetase 1) [NCBI Gene 2058] {aka EARS, EPRS, GLUPRORS, HLD15, PARS, PIG32}, Nucleoprotein [NCBI Gene 956592], PRS [NCBI Gene 5640], TSG101 (tumor susceptibility 101) [NCBI Gene 7251] {aka TSG10, VPS23}
- **Diseases:** hepatitis (MESH:D056486), pulmonary fibrosis (MESH:D011658), LF (MESH:D007835), hypomyelinating leukodystrophy (MESH:C536319), viral infection (MESH:D014777), toxicity (MESH:D064420), MaAv infections (MESH:D007239), myocarditis (MESH:D009205), autoimmune diseases (MESH:D001327), fibrotic disorders (MESH:D009358), cardiotoxicity (MESH:D066126), VHFD (MESH:D006482), Argentine hemorrhagic fever (MESH:D006478), hemorrhagic fever (MESH:D006480), mitochondrial dysfunction (MESH:D028361), inflammatory (MESH:D007249), injury to (MESH:D014947), cancer (MESH:D009369)
- **Chemicals:** PFA (MESH:C003043), nucleoside (MESH:D009705), L-glutamine (MESH:D005973), CO2 (MESH:D002245), DAPI (MESH:C007293), DMSO (MESH:D004121), formalin (MESH:D005557), Z (MESH:C000597310), NADH (MESH:D009243), Sodium citrate (MESH:D000077559), Alexa Fluor 647 (MESH:C569686), penicillin (MESH:D010406), DMEM (-), methyl acetate (MESH:C046923), HF (MESH:C010176), Alexa Fluor 488 (MESH:C000711379), 4'-fluorouridine (MESH:C000717487), Lipofectamine 2000 (MESH:C086724), amino acid (MESH:D000596), NADPH (MESH:D009249), RBV (MESH:D012254), febrifugine (MESH:C001207), tetrazolium (MESH:D013778), favipiravir (MESH:C462182), formazan (MESH:D005562), IMP-1088 (MESH:C000723047), L-Proline (MESH:D011392), streptomycin (MESH:D013307), NH4Cl (MESH:D000643)
- **Species:** HF [taxon 2008765], LASV [taxon 11620], Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049], LCMV [taxon 11623], Mammarenavirus juninense (species) [taxon 2169991], Mammarenavirus (genus) [taxon 1653394], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** G2A, N1584A
- **Cell lines:** Ea.hy926 — Homo sapiens (Human), Hybrid cell line (CVCL_3901), Vero E6 — Chlorocebus sabaeus (Green monkey), Spontaneously immortalized cell line (CVCL_0574), Ea HY 926 — Homo sapiens (Human), Induced pluripotent stem cell (CVCL_A1NX), African green monkey kidney — Chlorocebus aethiops (Green monkey), Embryonic stem cell (CVCL_RY74), S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), HAP1 — Homo sapiens (Human), Chronic myelogenous leukemia, BCR-ABL1 positive, Cancer cell line (CVCL_Y019), A549 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023), HEK 293T — Homo sapiens (Human), Transformed cell line (CVCL_0063)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12944994/full.md

## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12944994/full.md

## References

81 references — full list in the complete paper: https://tomesphere.com/paper/PMC12944994/full.md

---
Source: https://tomesphere.com/paper/PMC12944994