# Mosses ML: Machine-Learning-Enhanced Biomonitoring of Emerging Contaminants Using Hylocomium splendens: An Integrated Approach Linking Atmospheric Deposition, Trace Metals, and Predictive Risk Assessment

**Authors:** Grzegorz Kosior, Kacper Matik, Monika Sporek, Zbigniew Ziembik, Antonina Kalinichenko

PMC · DOI: 10.3390/toxics14020121 · Toxics · 2026-01-28

## TL;DR

This paper introduces Mosses ML, a machine learning framework that improves the detection and risk assessment of atmospheric pollutants using mosses as bioindicators.

## Contribution

The novel contribution is the integration of machine learning with moss biomonitoring to enhance predictive and mechanistic insights into atmospheric contamination.

## Key findings

- ML models achieved high predictive accuracy (R2 up to 0.91) in estimating moss metal concentrations from deposition metrics.
- Dry deposition load and co-occurring metal signals were identified as the main predictors of contamination.
- The ML approach improved high-risk site identification by 24–38% compared to traditional methods.

## Abstract

Atmospheric deposition of emerging contaminants, including toxic trace elements, remains a critical environmental and public health concern. Moss biomonitoring offers a sensitive and cost-effective tool for assessing airborne pollutants, yet traditional analyses rely on descriptive statistics and lack predictive and mechanistic insights. Here, we introduce Mosses ML, a machine-learning-enhanced framework that integrates moss biomonitoring with bulk and dry deposition measurements to improve detection, interpretation, and risk assessment of atmospheric contaminants. Using Hylocomium splendens transplants exposed for 90 days across industrial, urban, and rural sites in Upper Silesia (Poland), we combined trace element accumulation (Cd, Pb, Zn, Ni, Cr, Fe), relative accumulation factors (RAFs), PCA-derived gradients, and site-level metadata with Random Forest and Gradient Boosting models. ML algorithms achieved high predictive performance (R2 up to 0.91), accurately estimating moss metal concentrations from deposition metrics and environmental variables. SHAP feature-importance analysis identified dry deposition load and co-occurring metal signals as the dominant predictors of contamination, confirming the primary role of particulate emissions in shaping moss chemistry. Compared with classical threshold-based classification, the ML approach improved high-risk site identification by 24–38%. Mosses ML combines biologically meaningful indicators with modern computational tools, strengthening the role of mosses as early-warning systems for atmospheric pollution. The framework is broadly applicable to bryophyte biomonitoring and supports regulatory decision-making for emerging contaminants.

## Linked entities

- **Chemicals:** Cd (PubChem CID 23973), Pb (PubChem CID 5352425), Zn (PubChem CID 23994), Ni (PubChem CID 934), Cr (PubChem CID 23976), Fe (PubChem CID 23925)
- **Species:** Hylocomium splendens (taxon 53007), Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** SHROOM4 (shroom family member 4) [NCBI Gene 57477] {aka MRXSSDS, SHAP, shrm4}, PCSK1 (proprotein convertase subtilisin/kexin type 1) [NCBI Gene 5122] {aka BMIQ12, NEC1, PC1, PC1/3, PC3, SPC3}, ZHX2 (zinc fingers and homeoboxes 2) [NCBI Gene 22882] {aka AFR1, RAF}
- **Diseases:** injury to (MESH:D014947)
- **Chemicals:** particulates (-), hexane (MESH:D006586), K (MESH:D011188), Cr (MESH:D002857), white petrolatum (MESH:D010577), Co (MESH:D003035), Pb (MESH:D007854), Cd (MESH:D002104), HClO4 (MESH:C576518), cellulose (MESH:D002482), Manganese (MESH:D008345), HNO3 (MESH:D017942), Mg (MESH:D008274), Metal (MESH:D008670), nylon (MESH:D009757), Zn (MESH:D015032), Ni (MESH:D009532), Water (MESH:D014867), trace element (MESH:D014131), V (MESH:D014639), Fe (MESH:D007501), Thymol (MESH:D013943), Cu (MESH:D003300), polyethylene (MESH:D020959)
- **Species:** Pleurozium schreberi (species) [taxon 34163], Homo sapiens (human, species) [taxon 9606], Bryophyta (mosses, clade) [taxon 3208], Hylocomium splendens (species) [taxon 53007]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12944864/full.md

## References

23 references — full list in the complete paper: https://tomesphere.com/paper/PMC12944864/full.md

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Source: https://tomesphere.com/paper/PMC12944864