# Beyond Viral Restriction: The Metabolic Dimensions of Interferon-Stimulated Genes in Antiviral Immunity

**Authors:** Xiaoyu Ding, Libao Liu, Haiming Wei

PMC · DOI: 10.3390/v18020160 · Viruses · 2026-01-25

## TL;DR

This review explores how interferon-stimulated genes (ISGs) influence cellular metabolism to fight viruses and how viruses can counteract these defenses.

## Contribution

The paper highlights the novel role of ISGs in modulating metabolism as part of antiviral immunity and how viruses exploit these pathways.

## Key findings

- ISGs modulate glycolysis, lipid, amino acid, and nucleotide metabolism to create an antiviral environment.
- Viruses can evade or hijack ISG-driven metabolic pathways to their advantage.
- ISGs may act as both protective and pathogenic regulators in antiviral immunity.

## Abstract

Interferon-stimulated genes (ISGs) are classically recognized for their direct antiviral functions, such as viral genome degradation or replication blockade. However, emerging evidence reveals that ISGs orchestrate a broader landscape of host defense by rewiring cellular metabolism. These mechanisms are still not fully understood in the context of antiviral immunity. This review synthesizes recent advances in understanding how ISGs modulate metabolic pathways (e.g., glycolysis, lipid metabolism, amino acids, and nucleotide metabolism) to create an antiviral cellular environment. However, viruses have developed strategies to evade or counteract ISG-encoded proteins, and some even hijack certain ISGs to their advantage. Therefore, we further explore how viruses subvert these ISG-driven metabolic to evade host defenses. Overall, we summarize the current state of knowledge on the interactions between viruses and ISGs and propose that ISGs act as “protective” or “pathogenic” regulators at the dimensions of metabolism, offering new perspectives for targeting host-centered pathways to combat viral infections.

## Full-text entities

- **Genes:** UBE2L6 (ubiquitin conjugating enzyme E2 L6) [NCBI Gene 9246] {aka RIG-B, UBCH8}, TYK2 (tyrosine kinase 2) [NCBI Gene 7297] {aka IMD35, JTK1}, STING1 (stimulator of interferon response cGAMP interactor 1) [NCBI Gene 340061] {aka ERIS, MITA, MPYS, NET23, SAVI, STING}, HADHB (hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta) [NCBI Gene 3032] {aka ECHB, MSTP029, MTPB, MTPD, MTPD2, TP-BETA}, STAT1 (signal transducer and activator of transcription 1) [NCBI Gene 6772] {aka CANDF7, IMD31A, IMD31B, IMD31C, ISGF-3, STAT91}, IRF9 (interferon regulatory factor 9) [NCBI Gene 10379] {aka IRF-9, ISGF3, ISGF3G, p48}, NOS2 (nitric oxide synthase 2) [NCBI Gene 4843] {aka HEP-NOS, INOS, NOS, NOS2A}, IFNLR1 (interferon lambda receptor 1) [NCBI Gene 163702] {aka CRF2/12, IFNLR, IL-28R1, IL28RA, LICR2}, FDPS (farnesyl diphosphate synthase) [NCBI Gene 2224] {aka FPPS, FPS, POROK9}, CH25H (cholesterol 25-hydroxylase) [NCBI Gene 9023] {aka C25H}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, MIR130B (microRNA 130b) [NCBI Gene 406920] {aka MIRN130B, mir-130b}, SCARB1 (scavenger receptor class B member 1) [NCBI Gene 949] {aka CD36L1, CLA-1, CLA1, HDLCQ6, HDLQTL6, SR-BI}, IDO1 (indoleamine 2,3-dioxygenase 1) [NCBI Gene 3620] {aka IDO, IDO-1, INDO}, IL10RB (interleukin 10 receptor subunit beta) [NCBI Gene 3588] {aka CDW210B, CRF2-4, CRFB4, D21S58, D21S66, IBD25}, LDLR (low density lipoprotein receptor) [NCBI Gene 3949] {aka LDLCQ2}, CD38 (CD38 molecule) [NCBI Gene 952] {aka ADPRC 1, ADPRC1, cADPR1}, ISG15 (ISG15 ubiquitin like modifier) [NCBI Gene 9636] {aka G1P2, IFI15, IMD38, IP17, UCRP, hUCRP}, PFKM (phosphofructokinase, muscle) [NCBI Gene 5213] {aka ATP-PFK, GSD7, PFK-1, PFK-A, PFK1, PFKA}, TBK1 (TANK binding kinase 1) [NCBI Gene 29110] {aka AIARV, FTDALS4, IIAE8, NAK, T2K}, PKM (pyruvate kinase M1/2) [NCBI Gene 5315] {aka CTHBP, HEL-S-30, OIP3, PK3, PKM2, TCB}, AHR (aryl hydrocarbon receptor) [NCBI Gene 196] {aka FVH3, RP85, bHLHe76}, MAVS (mitochondrial antiviral signaling protein) [NCBI Gene 57506] {aka CARDIF, IPS-1, IPS1, VISA}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, PSMB9 (proteasome 20S subunit beta 9) [NCBI Gene 5698] {aka LMP2, PRAAS3, PRAAS6, PSMB6i, RING12, beta1i}, IFNAR1 (interferon alpha and beta receptor subunit 1) [NCBI Gene 3454] {aka AVP, CRF2-1, IFN-R-1, IFN-alpha-REC, IFNAR, IFNBR}, MIR185 (microRNA 185) [NCBI Gene 406961] {aka MIRN185, miR-185}, HK1 (hexokinase 1) [NCBI Gene 3098] {aka CNSHA5, HK, HK1-ta, HK1-tb, HK1-tc, HKD}, IRF5 (interferon regulatory factor 5) [NCBI Gene 3663] {aka SLEB10}, IL10 (interleukin 10) [NCBI Gene 3586] {aka CSIF, GVHDS, IL-10, IL10A, TGIF}, RIGI (RNA sensor RIG-I) [NCBI Gene 23586] {aka DDX58, RIG-I, RIG1, RLR-1, SGMRT2}, UBE4A (ubiquitination factor E4A) [NCBI Gene 9354] {aka E4, NEDHMS, UBOX2, UFD2}, EIF2AK2 (eukaryotic translation initiation factor 2 alpha kinase 2) [NCBI Gene 5610] {aka PKR, PPP1R83, PRKR}, G6PD (glucose-6-phosphate dehydrogenase) [NCBI Gene 2539] {aka CNSHA1, G6PD1}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, INSIG2 (insulin induced gene 2) [NCBI Gene 51141] {aka INSIG-2}, IFNB1 (interferon beta 1) [NCBI Gene 3456] {aka IFB, IFF, IFN-beta, IFNB}, OASL (2'-5'-oligoadenylate synthetase like) [NCBI Gene 8638] {aka OASL1, OASLd, TRIP-14, TRIP14, p59 OASL, p59-OASL}, UBA7 (ubiquitin like modifier activating enzyme 7) [NCBI Gene 7318] {aka D8, UBA1B, UBE1L, UBE2, UBE7}, PLSCR1 (phospholipid scramblase 1) [NCBI Gene 5359] {aka MMTRA1B}, IFNAR2 (interferon alpha and beta receptor subunit 2) [NCBI Gene 3455] {aka IFN-R, IFN-R-2, IFN-alpha-REC, IFNABR, IFNARB, IMD45}, OGT (O-linked N-acetylglucosamine (GlcNAc) transferase) [NCBI Gene 8473] {aka HINCUT-1, HRNT1, MRX106, O-GLCNAC, OGT1, XLID106}, CPT2 (carnitine palmitoyltransferase 2) [NCBI Gene 1376] {aka CPT1, CPTASE, IIAE4}, IFNA1 (interferon alpha 1) [NCBI Gene 3439] {aka IFL, IFN, IFN-ALPHA, IFN-alphaD, IFNA13, IFNA@}, HK2 (hexokinase 2) [NCBI Gene 3099] {aka HKII, HXK2}, PDLIM7 (PDZ and LIM domain 7) [NCBI Gene 9260] {aka LMP1, LMP3}, EIF2A (eukaryotic translation initiation factor 2A) [NCBI Gene 83939] {aka CDA02, EIF-2A, MST089, MSTP004, MSTP089}, EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}, SGK1 (serum/glucocorticoid regulated kinase 1) [NCBI Gene 6446] {aka SGK}, CNBP (CCHC-type zinc finger nucleic acid binding protein) [NCBI Gene 7555] {aka CNBP1, DM2, PROMM, RNF163, ZCCHC22, ZNF9}, SLC2A1 (solute carrier family 2 member 1) [NCBI Gene 6513] {aka CSE, DYT17, DYT18, DYT9, EIG12, GLUT}, TRAF6 (TNF receptor associated factor 6) [NCBI Gene 7189] {aka MGC:3310, RNF85}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, SREBF2 (sterol regulatory element binding transcription factor 2) [NCBI Gene 6721] {aka SREBP-2, SREBP2, bHLHd2}, FGF9 (fibroblast growth factor 9) [NCBI Gene 2254] {aka FGF-9, GAF, HBFG-9, HBGF-9, SYNS3}, JAK2 (Janus kinase 2) [NCBI Gene 3717] {aka JTK10}, OSBP (oxysterol binding protein) [NCBI Gene 5007] {aka OSBP1}, IFNGR1 (interferon gamma receptor 1) [NCBI Gene 3459] {aka CD119, IFNGR, IMD27A, IMD27B}, JAK1 (Janus kinase 1) [NCBI Gene 3716] {aka AIIDE, JAK1A, JAK1B, JTK3}, SCD (stearoyl-CoA desaturase) [NCBI Gene 6319] {aka FADS5, MSTP008, SCD1, SCDOS, hSCD1}
- **Diseases:** SLE (MESH:D008180), autoimmune diseases (MESH:D001327), viremia (MESH:D014766), myocarditis (MESH:D009205), fetal microcephaly (MESH:D005315), cancer (MESH:D009369), injury (MESH:D014947), chronic inflammation (MESH:D007249), hyperglycemia (MESH:D006943), H1N1 influenza virus (MESH:D007251), mitochondrial dysfunction (MESH:D028361), ovarian inflammation (MESH:D010049), pregnancy abnormalities (MESH:D011254), tissue damage (MESH:D017695), chronic diseases (MESH:D002908), NPC (MESH:D000077274), acute heart failure (MESH:D006333), cardiac dysfunction (MESH:D006331), liver injury (MESH:D017093), antiviral infection (MESH:D007239), infertility (MESH:D007246), HCV infection (MESH:D006526), Viral Infection (MESH:D014777)
- **Chemicals:** 3'-deoxy-3',4'-didehydro-CTP (MESH:C000629696), kynurenine (MESH:D007737), asparagine (MESH:D001216), NO (MESH:D009569), Cholesterol (MESH:D002784), pyrimidine (MESH:C030986), cAMP (MESH:D000242), purines (MESH:D011687), phospholipid (MESH:D010743), nicotinamide (MESH:D009536), phosphoenolpyruvate (MESH:D010728), 3-phosphoglycerate (MESH:C005156), Nucleotide (MESH:D009711), acetyl-CoA (MESH:D000105), S-adenosylmethionine (MESH:D012436), isoprenoid (MESH:D013729), malonyl-CoA (MESH:D008316), lactate (MESH:D019344), glucose-6-phosphate (MESH:D019298), triglycerides (MESH:D014280), TCA (MESH:D014233), carbon (MESH:D002244), pentose phosphate (MESH:D010428), pyruvate (MESH:D019289), GTP (MESH:D006160), cADPR (MESH:D036563), cGMP (MESH:D006152), mevalonate (MESH:D008798), vitamin D (MESH:D014807), ADP-ribose (MESH:D000246), oxygen (MESH:D010100), NAD+ (MESH:D009243), tryptophan (MESH:D014364), Glucose (MESH:D005947), hexosamine (MESH:D006595), reactive oxygen species (MESH:D017382), ATP (MESH:D000255), steroid hormones (MESH:D013256), pyrimidines (MESH:D011743), Glutamine (MESH:D005973), Lipid (MESH:D008055), 25-HC (MESH:C007997), sterol (MESH:D013261), cGAMP (MESH:C584311), NADP+ (MESH:D009249), Amino Acid (MESH:D000596), FAD (MESH:D005182), ribonucleotide (MESH:D012265), carbohydrates (MESH:D002241), arginine (MESH:D001120), fatty acid (MESH:D005227), CVB3 (-), uridine diphosphate N-acetylglucosamine (MESH:D014537), palmitate (MESH:D010168), bile acids (MESH:D001647), fructose-6-phosphate (MESH:C027618), alpha-KG (MESH:D007656), CTP (MESH:D003570)
- **Species:** Coxsackievirus B3 (no rank) [taxon 12072], Orthopoxvirus vaccinia (species) [taxon 10245], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049], Mus musculus (house mouse, species) [taxon 10090], Coxsackievirus (species) [taxon 12066], Hepatitis C virus [taxon 11103], Zika virus (no rank) [taxon 64320], Porcine reproductive and respiratory syndrome virus (no rank) [taxon 28344], Influenza A virus (no rank) [taxon 11320], Bacillus sp. AT (species) [taxon 1196779], human gammaherpesvirus 4 (Epstein Barr virus, no rank) [taxon 10376], Homo sapiens (human, species) [taxon 9606], Chiroptera (bats, order) [taxon 9397], Macaca mulatta (rhesus macaque, species) [taxon 9544]

## Full text

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## Figures

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## References

142 references — full list in the complete paper: https://tomesphere.com/paper/PMC12944853/full.md

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Source: https://tomesphere.com/paper/PMC12944853