# Harnessing Plant–Microorganism Interactions to Mitigate Biotic and Abiotic Stresses for Sustainable Crops

**Authors:** Mayara Santana dos Santos, Silas Pessini Rodrigues, Adriana Silva Hemerly, Antonio Alberto Ribeiro Fernandes, Patricia Machado Bueno Fernandes

PMC · DOI: 10.3390/plants15040647 · 2026-02-19

## TL;DR

This paper reviews how beneficial microorganisms can help plants withstand environmental and biological stresses, offering a sustainable alternative to agrochemicals.

## Contribution

The paper systematically reviews the role of plant growth-promoting microorganisms in mitigating stress and enhancing agricultural sustainability.

## Key findings

- Plant–microorganism interactions can improve plant tolerance to biotic and abiotic stresses.
- Microorganisms promote plant growth by fixing nitrogen and solubilizing nutrients like phosphorus and potassium.
- These microbes induce systemic resistance and phytohormone synthesis, aiding plant development under stress.

## Abstract

Climate change has intensified the occurrence of biotic and abiotic stresses, representing a major threat to agricultural productivity. This climate variability, coupled with the excessive use of agrochemicals, not only compromises environmental sustainability but also exacerbates food insecurity, directly affecting food availability and quality. In this context, biotechnological strategies have proven essential for mitigating the effects of stress on plants, promoting practices focused on agricultural sustainability. Notable among these strategies is the use of plant growth-promoting microorganisms, which are emerging as promising alternatives capable of improving plant tolerance to stress conditions and simultaneously reducing dependence on agrochemicals. These microorganisms can act as nitrogen fixers and solubilizers of nutrients, such as phosphorus and potassium. Additionally, they can influence plant immune responses by inducing systemic resistance and promoting the synthesis of phytohormones, such as auxins, cytokinins, and abscisic acid, which support plant development during the stress response. The interaction between plants and microorganisms represents a sustainable agricultural management strategy capable of enhancing crop tolerance to environmental adversities. In this review, we discuss the microorganisms known to establish beneficial interactions with plants, leading to improved performance under biotic and abiotic stress. Overall, this work highlights the potential of plant–microbe partnerships as a cornerstone for advancing sustainable agriculture in the face of global challenges.

## Linked entities

- **Chemicals:** nitrogen (PubChem CID 947), phosphorus (PubChem CID 139579), potassium (PubChem CID 813), abscisic acid (PubChem CID 30583)

## Full-text entities

- **Genes:** PAL [NCBI Gene 542258], SPS [NCBI Gene 542711], CAT2 [NCBI Gene 542230], LOC542372 (phosphoenolpyruvate carboxylase 1) [NCBI Gene 542372] {aka GRMZM2G083841, PEPC1, PEPCase, PPC1, PPEPC4, pep1}, PR5 [NCBI Gene 542720], P5CS [NCBI Gene 778431], Peroxidase [NCBI Gene 547504], PR1 [NCBI Gene 542352], Catalase [NCBI Gene 100037447], LOC542251 (dehydrin) [NCBI Gene 542251] {aka GRMZM2G373522, dehydrin3, dhn-2, dhn2}, CPPS2 (CPP synthase) [NCBI Gene 542165] {aka Ent-CPS, Ent-CPS 2, GRMZM2G044481, ZmAN2, an2}, RBC-L [NCBI Gene 845212], AN1 [NCBI Gene 542253], Ascorbate peroxidase [NCBI Gene 100286773], RDR6 [NCBI Gene 100274261], lox1 (linoleate 9S-lipoxygenase1) [NCBI Gene 541856] {aka GRMZM2G156861, LOX}, WRKY70 [NCBI Gene 103645995], LOC100170665 (uncharacterized LOC100170665) [NCBI Gene 100170665] {aka GRMZM2G347043, NAC1, NAC49, SNAC1}, glutathione peroxidase [NCBI Gene 100306295], APX [NCBI Gene 542476]
- **Diseases:** stunted growth (MESH:D006130), antibiotic (MESH:D004761), cardiorespiratory diseases (MESH:D004194), injury to (MESH:D014947), viral diseases (MESH:D014777), heavy metal toxicity (MESH:D000075322), SAR (MESH:D063730), infection (MESH:D007239), fungal (MESH:D009181)
- **Chemicals:** Phosphorus (MESH:D010758), phosphate (MESH:D010710), salt (MESH:D012492), nitrate (MESH:D009566), capsidiol (MESH:C081843), sugars (MESH:D000073893), SA (MESH:D020156), oxygen (MESH:D010100), calcium carbonate (MESH:D002119), Proline (MESH:D011392), ABA (MESH:D000040), indole-3-acetamide (MESH:C015950), chitin (MESH:D002686), chlorophyll (MESH:D002734), carbon (MESH:D002244), ammonium (MESH:D064751), polysaccharide (MESH:D011134), ET (MESH:C036216), MDA (MESH:D015104), N2 (MESH:D009584), disaccharide (MESH:D004187), iron (MESH:D007501), brassinin (MESH:C089020), gibberellins (MESH:D005875), carotenoids (MESH:D002338), malic acid (MESH:C030298), nervonic acid (MESH:C013147), 2,4-DAPG (MESH:C059817), K+ (MESH:D011188), DMDS (MESH:C021181), glycine betaine (MESH:D001622), Exopolysaccharides (-), H2O2 (MESH:D006861), oxaloacetate (MESH:D062907), nitrite (MESH:D009573), amino acids (MESH:D000596), lipid (MESH:D008055), ATP (MESH:D000255), CK (MESH:D003583), citric (MESH:D019343), carbon dioxide (MESH:D002245), flavonoid (MESH:D005419), Trehalose (MESH:D014199), chlorogenic acid (MESH:D002726), JA (MESH:C011006), calcium (MESH:D002118), ROS (MESH:D017382), auxin (MESH:D007210), GA (MESH:D005708), IAA (MESH:C030737), tryptophan (MESH:D014364)
- **Species:** Groundnut bud necrosis virus (no rank) [taxon 198612], Bacillus subtilis (species) [taxon 1423], Trichoderma hamatum (species) [taxon 49224], Glycine max (soybean, species) [taxon 3847], Bacillus cereus (species) [taxon 1396], Xylella fastidiosa (species) [taxon 2371], Pyricularia oryzae (rice blast fungus, species) [taxon 318829], Lactuca sativa (cultivated lettuce, species) [taxon 4236], Mesorhizobium sp. (species) [taxon 1871066], Bipolaris maydis (southern corn leaf blight pathogen, species) [taxon 5016], Cronobacter dublinensis (species) [taxon 413497], Pseudomonas protegens Pf-5 (strain) [taxon 220664], Bacillus amyloliquefaciens (species) [taxon 1390], Leuconostoc mesenteroides (species) [taxon 1245], Brassica rapa subsp. oleifera (biennial turnip rape, subspecies) [taxon 145471], Chlorella sp. (species) [taxon 3079], Trichoderma harzianum (species) [taxon 5544], Bacillus tequilensis (species) [taxon 227866], Globisporangium ultimum (species) [taxon 2052682], Paenibacillus (genus) [taxon 44249], Nicotiana tabacum (American tobacco, species) [taxon 4097], Priestia megaterium (species) [taxon 1404], Fungi (kingdom) [taxon 4751], Sclerotinia sclerotiorum (species) [taxon 5180], Arachis hypogaea (goober, species) [taxon 3818], Shewanella putrefaciens (species) [taxon 24], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Capsicum annuum (sweet pepper, species) [taxon 4072], Pseudomonas putida (species) [taxon 303], Sclerotinia minor (species) [taxon 38451], Solanum lycopersicum (tomato, species) [taxon 4081], Chlorophyta (green algae, phylum) [taxon 3041], Pseudomonas sp. (species) [taxon 306], Homo sapiens (human, species) [taxon 9606], Enterobacter cloacae (species) [taxon 550], Tomato yellow leaf curl virus (no rank) [taxon 10832], Tomato mosaic virus (no rank) [taxon 12253], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Cupriavidus pinatubonensis (species) [taxon 248026], Oryza sativa (Asian cultivated rice, species) [taxon 4530], PX clade (clade) [taxon 569578], Fusarium oxysporum (species) [taxon 5507], Bacillus thuringiensis (species) [taxon 1428], Rhizoctonia solani (species) [taxon 456999], Brassica rapa subsp. pekinensis (bai cai, subspecies) [taxon 51351], Sorghum bicolor (broomcorn, species) [taxon 4558], Jania sp. (species) [taxon 2116078], Bipolaris sp. (species) [taxon 1756142], Triticum aestivum (bread wheat, species) [taxon 4565], Streptomyces pactum (species) [taxon 68249], Botrytis cinerea (gray fruit mold, species) [taxon 40559]

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12943981/full.md

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Source: https://tomesphere.com/paper/PMC12943981