# Flavin-Containing Monooxygenase 1 Gene Mediates Resistance to Calonectria pseudoreteaudii Crude Toxin in Arabidopsis thaliana and Eucalyptus grandis

**Authors:** Xiuping Huang, Wenbin Tang, Hongyi Liu, Guo-Dong Lu

PMC · DOI: 10.3390/plants15040577 · 2026-02-12

## TL;DR

A gene called FMO1 helps plants resist a fungal toxin, suggesting it could be important for improving disease resistance in crops.

## Contribution

The study identifies FMO1 as a key gene mediating resistance to a fungal toxin in both Arabidopsis and Eucalyptus.

## Key findings

- AtFMO1 knockout plants showed increased leaf yellowing and reduced defense markers when exposed to the toxin.
- The SA-dependent immune pathway is likely the main response in Arabidopsis to the toxin.
- Eucalyptus FMO1 genes showed distinct expression patterns in response to the toxin, indicating a conserved role in resistance.

## Abstract

Eucalyptus leaf blight is a globally distributed disease caused by Calonectria fungi, with C. pseudoreteaudii being the dominant pathogen in Fujian, China. The crude toxin produced by C. pseudoreteaudii is a key virulent factor. To investigate the resistance mechanism triggered by crude toxin infection, transcriptome sequencing, physiological observations, and qRT-PCR analyses were conducted. Transcriptome analysis of Arabidopsis thaliana treated with C. pseudoreteaudii crude toxin revealed that a flavin-containing monooxygenase 1 gene (AtFMO1) exhibited the highest differential expression with DMSO control. Compared with Arabidopsis ecotype Col-4 (the wild type, WT), AtFMO1 knockout mutant (Δfmo1) plants displayed dose-dependent leaf margin yellowing accompanied by reduced callose deposition and hydrogen peroxide (H2O2) accumulation under crude toxin treatment. qRT-PCR analysis of key genes from two immune pathways showed that the salicylic acid-dependent (SA-dependent) pathway was likely Arabidopsis’s primary response pathway for crude toxin. In E. grandis, a total of 38 EgFMOs were identified, with eight EgFMO1s, based on the protein sequence similarity, conserved domain, and motif pattern. qRT-PCR analysis of EgFMO1s revealed two major expression patterns in response to crude toxin treatment: an initial downregulation followed by upregulation, and continuous upregulation. Collectively, these results suggest FMO1 plays a positive role in resistance to C. pseudoreteaudii crude toxin in both A. thaliana and E. grandis.

## Linked entities

- **Chemicals:** hydrogen peroxide (PubChem CID 784), DMSO (PubChem CID 679)
- **Species:** Arabidopsis thaliana (taxon 3702), Eucalyptus grandis (taxon 71139), Calonectria pseudoreteaudii (taxon 707572)

## Full-text entities

- **Genes:** MPK1 (mitogen-activated protein kinase 1) [NCBI Gene 837559] {aka ATMPK1, F14N23.9, F14N23_9, MITOGEN-ACTIVATED PROTEIN KINASE, mitogen-activated protein kinase 1}, FMO (Flavin-binding monooxygenase family protein) [NCBI Gene 837773] {aka T28K15.7, T28K15_7, flavin monooxygenase}, PR1 (pathogenesis-related protein 1) [NCBI Gene 815949] {aka ATPR1, PATHOGENESIS-RELATED GENE 1, PATHOGENESIS-RELATED PROTEIN 1, PR 1, T6B13.15, T6B13_15}, AT4G20350 (oxidoreductase) [NCBI Gene 827783] {aka F9F13.6, F9F13_6}, NPR1 (regulatory protein (NPR1)) [NCBI Gene 842733] {aka ARABIDOPSIS NONEXPRESSER OF PR GENES 1, ATNPR1, F15H21.6, F15H21_6, NIM1, NON-INDUCIBLE IMMUNITY 1}, EDS1 (alpha/beta-Hydrolases superfamily protein) [NCBI Gene 823964] {aka ATEDS1, EDS1 PROTEIN, enhanced disease susceptibility 1}, FMO1 (flavin-dependent monooxygenase 1) [NCBI Gene 838508] {aka T29M8.12, T29M8_12, flavin-dependent monooxygenase 1}
- **Diseases:** injury to (MESH:D014947), FMOs (MESH:C562935), infection (MESH:D007239), WT (MESH:D006969), Fungal (MESH:D009181)
- **Chemicals:** Crude Toxin (-), H2O2 (MESH:D006861), N-hydroxypipecolic acid (MESH:C000631908), hypotaurine (MESH:C003949), methanol (MESH:D000432), T (MESH:D014316), NaCl (MESH:D012965), SA (MESH:D000077145), molecular oxygen (MESH:D010100), glycerol (MESH:D005990), salicylic acid (MESH:D020156), zeatin (MESH:D015026), ethylene (MESH:C036216), K2HPO4 (MESH:C013216), nitrogen (MESH:D009584), ammonium tartrate (MESH:C029768), FAD (MESH:D005182), taurine (MESH:D013654), aniline blue (MESH:C017006), water (MESH:D014867), SYBR Green (MESH:C098022), sucrose (MESH:D013395), Callose (MESH:C048306), 3,3'-diaminobenzidine (MESH:D015100), alcohol (MESH:D000438), acetic acid (MESH:D019342), ethanol (MESH:D000431), jasmonic acid (MESH:C011006), NH4NO3 (MESH:C006568), DAPI (MESH:C007293), DMSO (MESH:D004121), ROS (MESH:D017382)
- **Species:** Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Calonectria (genus) [taxon 57138], Homo sapiens (human, species) [taxon 9606], Cylindrocladium [taxon 40266], Oryza punctata (species) [taxon 4537], Calonectria pseudoreteaudii (species) [taxon 707572], Eucalyptus grandis (rose gum, species) [taxon 71139], Triticum aestivum (bread wheat, species) [taxon 4565]
- **Cell lines:** YA51 — Homo sapiens (Human), Invasive breast carcinoma of no special type, Cancer cell line (CVCL_1H31), -4 — Homo sapiens (Human), Ataxia telangiectasia syndrome, Finite cell line (CVCL_F083)

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12943951/full.md

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Source: https://tomesphere.com/paper/PMC12943951