# Hidden Activities of Tyrosine Phenol-Lyase and Tryptophan Indole-Lyase: Recombinant PLP-Dependent C–C Lyases as New Biocatalysts for Antimicrobial Thiosulfinate Generation

**Authors:** Vitalia V. Kulikova, Svetlana V. Revtovich, Kseniya P. Levshina, Yaroslav V. Kozmenko, Natalya V. Anufrieva, Elena A. Morozova, Pavel N. Solyev

PMC · DOI: 10.3390/ph19020291 · 2026-02-10

## TL;DR

This paper discovers new enzyme activities that can produce antimicrobial compounds from specific amino acid derivatives.

## Contribution

First demonstration that C–C lyases can act as C–S lyases to synthesize thiosulfinates from cysteine sulfoxides.

## Key findings

- TPL and Trpase, along with MGL, can degrade petiveriin into thiosulfinates.
- Enzyme-generated thiosulfinates show antimicrobial activity against pathogens like Candida albicans and Staphylococcus aureus.

## Abstract

Background: Lyases are used in a wide scope of applications, making them invaluable tools in both industrial biotechnology and molecular biology. Many examples of lyases belong to the extensive family of pyridoxal 5′-phosphate (PLP)-dependent enzymes, which catalyze numerous reactions involved in amino acid metabolism, like tryptophan indole-lyase (Trpase or Tnase), tyrosine phenol-lyase (TPL), and methionine γ-lyase (MGL). Beyond their role in physiological processes, these lyases can also facilitate the synthesis of other biologically active products from non-canonical substrates. Objectives: Up till now there were only two C–S lyases known for the thiosulfinates’ biosynthesis from S-substituted L-cysteine sulfoxides—alliinase and MGL. Our study reveals for the first time that C–C lyases are capable of C–S lyase activity in reactions with S-alkyl, S-allyl and S-benzyl cysteine sulfoxides. Methods: We have compared the kinetic profiles of S-substituted L-cysteine sulfoxide degradation mediated by carbon–sulfur lyase MGL versus carbon–carbon lyases TPL and Trpase. Results: Among other S-alkyl-L-cysteine sulfoxides, petiveriin (S-benzyl-L-cysteine sulfoxide) was proven to be a substrate for all three enzymes. The potential utility of these enzymes in thiosulfinate production was supported by in vitro testing of enzyme-generated thiosulfinates against clinically relevant pathogens such as Candida albicans, Pseudomonas aeruginosa, and Staphylococcus aureus. Conclusions: Both C–S and C–C lyases—MGL, TPL, and Trpase—can be implemented for practical application in thiosulfinate synthesis.

## Linked entities

- **Proteins:** Tpl (Triplolethal), CLEC10A (C-type lectin domain containing 10A)
- **Chemicals:** pyridoxal 5′-phosphate (PubChem CID 1051), petiveriin (PubChem CID 16075057)

## Full-text entities

- **Diseases:** bacterial infections (MESH:D001424), infectious diseases (MESH:D003141), bacterial and fungal infections (MESH:D009181), abnormalities (MESH:D000014), cytotoxic (MESH:D064420), Lyases (MESH:D056807), injury to (MESH:D014947), cystic fibrosis (MESH:D003550), cancer (MESH:D009369)
- **Chemicals:** L-cysteine (MESH:D003545), glutathione (MESH:D005978), methanethiol (MESH:C005231), DETS (MESH:C068718), ethiin (MESH:C406690), DATS (MESH:C028145), L-tryptophan (MESH:D014364), PLP (MESH:D011732), H (MESH:D006859), allicin (MESH:C006452), Lys (MESH:D008239), acetate (MESH:D000085), DPTS (MESH:C059372), NADH (MESH:D009243), thiosulfates (MESH:D013885), proton (MESH:D011522), Sulfoxides (MESH:D013454), S (MESH:D013455), L-cysteine sulfoxide (MESH:C100870), H2S (MESH:D006862), DMTS (MESH:D004130), L-DOPA (MESH:D007980), 4H (-), 2H (MESH:D003903), sulfenic acid (MESH:D013434), Petivericin (MESH:C529747), alpha-ketobutyrate (MESH:C016635), Alliin (MESH:C006453), L-serine (MESH:D012694), amino acid (MESH:D000596), S-Methyl-L-cysteine sulfoxide (MESH:C008389), MOPS (MESH:C008550), Amphotericin B (MESH:D000666), S-benzyl cysteine sulfoxide (MESH:C445736), propiin (MESH:C495663), indoles (MESH:D007211), D2O (MESH:D017666), L-tyrosine (MESH:D014443), H2O (MESH:D014867), 13C (MESH:C000615229), glucosinolates (MESH:D005961), isothiocyanates (MESH:D017879), gentamicin (MESH:D005839), sulfoxide (MESH:C005746), cyanates (MESH:D003485), ammonia (MESH:D000641), O (MESH:D010100), sulfide (MESH:D013440), aromatic amino acids (MESH:D024322), acid (MESH:D000143), 2-Nitro-5-thiobenzoate (MESH:C011136), Phosphate (MESH:D010710), thiocyanates (MESH:D013861), methanol (MESH:D000432), 3H (MESH:D014316), PPB (MESH:D011075), pyruvic acid (MESH:D019289), L-Methionine (MESH:D008715), carbon (MESH:D002244), N (MESH:D009584)
- **Species:** PX clade (clade) [taxon 569578], Citrobacter freundii (species) [taxon 546], Oryctolagus cuniculus (domestic rabbit, species) [taxon 9986], Achromobacter ruhlandii (species) [taxon 72557], Petiveria alliacea (species) [taxon 46142], Homo sapiens (human, species) [taxon 9606], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Staphylococcus aureus (species) [taxon 1280], Burkholderia cenocepacia (species) [taxon 95486], Allium sativum (garlic, species) [taxon 4682], Salmonella enterica subsp. enterica serovar Typhimurium (no rank) [taxon 90371], aureus [taxon 46170], Candida albicans (species) [taxon 5476], Clostridium novyi (species) [taxon 1542], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Mus musculus (house mouse, species) [taxon 10090], Pseudomonas aeruginosa (species) [taxon 287]
- **Mutations:** C115H, His343Ala

## Figures

15 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12943590/full.md

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Source: https://tomesphere.com/paper/PMC12943590