# Strategies for Metabolic Engineering of Escherichia coli for β-Carotene Biosynthesis

**Authors:** Jiali Liu, Yilin Shi, Daxin Zhao, Minghao Lin, Ping Wang, Ying Zhou, Xiaohui Yan

PMC · DOI: 10.3390/molecules31040611 · Molecules · 2026-02-10

## TL;DR

This paper reviews strategies to engineer Escherichia coli for efficient β-carotene production, a valuable compound used in food, pharmaceuticals, and cosmetics.

## Contribution

The paper systematically summarizes metabolic engineering strategies for β-carotene biosynthesis in E. coli, emphasizing sustainable production.

## Key findings

- E. coli is a suitable host for β-carotene production due to its rapid growth and genetic tractability.
- Strategies include optimizing the MEP pathway, introducing the MVA pathway, and modifying central carbon metabolism.
- Efficient β-carotene production supports the sustainable synthesis of carotenoids and apocarotenoids.

## Abstract

β-Carotene has extensive applications in the food, pharmaceutical, and cosmetics industries. Traditional chemical synthesis methods face challenges such as byproduct residues and high costs, whereas natural extraction is constrained by low yields and complex processes. Recent advancements in synthetic biology and metabolic engineering have paved the way for the heterologous biosynthesis of β-carotene in microorganisms. Owing to its rapid growth, convenience of genetic manipulation, and suitability for producing apocarotenoids, Escherichia coli is an ideal host for the production of β-carotene and its derivatives, as exemplified by the record production of multiple apocarotenoids in engineered E. coli strains. Here, we summarize the metabolic engineering strategies employed to produce β-carotene in E. coli, including manipulation of the endogenous MEP pathway, introduction of the hybrid MVA pathway, modulation of central carbon metabolism, modification of the cell membrane, and fermentation process optimization. As β-carotene acts as a biosynthetic hub for many carotenoids and apocarotenoids, we also highlighted the importance of efficient β-carotene production for the sustainable preparation of these compounds. This review aims to provide theoretical insights for designing talented β-carotene producers and laying the foundation for the sustainable manufacturing of valuable carotenoids and apocarotenoids.

## Linked entities

- **Chemicals:** β-carotene (PubChem CID 573)
- **Species:** Escherichia coli (taxon 562)

## Full-text entities

- **Genes:** YjgB [NCBI Gene 8319278], GdhA [NCBI Gene 10076150]
- **Diseases:** Alzheimer's disease (MESH:D000544), cancer (MESH:D009369), injury to (MESH:D014947), neurodegenerative diseases (MESH:D019636), inflammation (MESH:D007249), eye diseases (MESH:D005128), heart disorders (MESH:D006331), cytotoxicity (MESH:D064420), osteoporosis (MESH:D010024)
- **Chemicals:** beta-ionone (MESH:C008157), neoxanthin (MESH:C011947), CL (MESH:C571055), isoprene (MESH:C005059), 1-deoxy-D-xylulose-5-phosphate (MESH:C109460), 2-methyl-D-erythritol-4-phosphate (MESH:C000598497), nucleotide (MESH:D009711), acetyl-CoA (MESH:D000105), Retinoids (MESH:D012176), capsanthin (MESH:C006889), terpenoid (MESH:D013729), Vitamin A (MESH:D014801), Lycopene (MESH:D000077276), Carotenoids (MESH:D002338), PEP (MESH:D010728), ADP (MESH:D000244), Carbon (MESH:D002244), G3P (MESH:D005986), MVA (MESH:C051113), 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MESH:C443879), damascenone (MESH:C502869), crocetin (MESH:C487773), glucose-6-phosphate (MESH:D019298), Zeaxanthin (MESH:D065146), oxygen (MESH:D010100), alpha-ionone (MESH:C011879), PYR (MESH:D019289), MECPP (MESH:C078327), MVA (MESH:D008798), SL (MESH:C000591191), adenosine (MESH:D000241), ABA (MESH:D000040), beta-farnesene (MESH:C062671), glucose (MESH:D005947), 4-diphosphocytidyl-2-C-methyl-D-erythritol (MESH:C400182), phytoene (MESH:C100185), HMBPP (MESH:C443995), beta-cryptoxanthin (MESH:D000072743), MEP (MESH:C064603), antheraxanthin (MESH:C031140), xanthophylls (MESH:D024341), IPP (MESH:C004809), Mevalonate 5-phosphate (MESH:C045038), Astaxanthin (MESH:C005948), pyrophosphate (MESH:C107241), All-trans-beta-carotene (MESH:D019207), lipid (MESH:D008055), 5-deoxystrigol (MESH:C528323), ATP (MESH:D000255), FPP (MESH:C004808), GPP (MESH:C015234), fatty acid (MESH:D005227), lutein (MESH:D014975), Acetoacetyl-CoA (MESH:C010667), Crocins (MESH:C029036), NADPH (MESH:D009249), amino acid (MESH:D000596), fructose-6-phosphate (MESH:C027618), safranal (MESH:C087963), 4-diphosphocytidyl-2-C-methyl-D-erythritol-2-phosphate (MESH:C406803)
- **Species:** Nicotiana tabacum (American tobacco, species) [taxon 4097], Komagataella phaffii (species) [taxon 460519], Deinococcus radiodurans (species) [taxon 1299], Pantoea agglomerans (species) [taxon 549], Pantoea ananatis (species) [taxon 553], Streptococcus pneumoniae (species) [taxon 1313], Kluyveromyces marxianus (species) [taxon 4911], Komagataella pastoris (species) [taxon 4922], Enterococcus faecalis (species) [taxon 1351], Acholeplasma laidlawii (species) [taxon 2148], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Chlorella vulgaris (species) [taxon 3077], Agrobacterium aurantiacum (species) [taxon 44155], Yarrowia lipolytica (species) [taxon 4952], Adonis aestivalis (summer pheasant's eye, species) [taxon 113211], Escherichia coli (E. coli, species) [taxon 562], Bacillus subtilis (species) [taxon 1423], Blakeslea trispora (species) [taxon 4850], Vibrio sp. (species) [taxon 678], Rhodotorula mucilaginosa (species) [taxon 5537], Abies grandis (grand fir, species) [taxon 46611], Phaffia rhodozyma (species) [taxon 264483], PX clade (clade) [taxon 569578], Brevundimonas sp. (species) [taxon 1871086], Synechocystis sp. (species) [taxon 1143], Dunaliella salina (species) [taxon 3046], Homo sapiens (human, species) [taxon 9606], Rhodococcus opacus (species) [taxon 37919], Escherichia coli BL21(DE3) (strain) [taxon 469008], Haematococcus lacustris (species) [taxon 44745], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Daucus carota (carrot, species) [taxon 4039], Cupriavidus necator H16 (strain) [taxon 381666], Rhodococcus erythropolis (species) [taxon 1833]
- **Mutations:** G6P
- **Cell lines:** XL1-Blue — Homo sapiens (Human), Burkitt lymphoma, Cancer cell line (CVCL_1967), S17-1 — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_E226), SD212 — Homo sapiens (Human), Bladder carcinoma, Cancer cell line (CVCL_W902), MG1655 — Homo sapiens (Human), Maple syrup urine disease, Transformed cell line (CVCL_D514), BL21 — Homo sapiens (Human), EBV-related Burkitt lymphoma, Cancer cell line (CVCL_M639), CAR025 — Carassius auratus (Goldfish), Spontaneously immortalized cell line (CVCL_4140), DH5alpha — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12943421/full.md

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12943421/full.md

## References

106 references — full list in the complete paper: https://tomesphere.com/paper/PMC12943421/full.md

---
Source: https://tomesphere.com/paper/PMC12943421