# Pro-Apoptotic and Anti-EMT Activity of Wild Ginseng Adventitious Root Extract in MDA-MB-231 TNBC Cells: Association with GSK-3β/β-Catenin Signaling

**Authors:** Chang-Eui Hong, Ducdat Le, Mina Lee, Su-Yun Lyu

PMC · DOI: 10.3390/ph19020216 · Pharmaceuticals · 2026-01-26

## TL;DR

Wild ginseng root extract shows anticancer effects in TNBC cells by inducing cell death and reducing cancer spread through specific molecular pathways.

## Contribution

WGAR extract demonstrates pro-apoptotic and anti-EMT activity in TNBC cells via GSK-3β/β-catenin signaling modulation.

## Key findings

- WGAR reduced cell viability with an IC50 of 79 μg/mL and induced 51.2% cell death in MDA-MB-231 cells.
- WGAR activated apoptosis through caspase-9 and -3 activation and suppressed EMT markers like N-cadherin and β-catenin.
- Proteome analysis showed decreased ECM remodeling and inflammatory proteins, suggesting anti-invasive effects.

## Abstract

Background/Objectives: Triple-negative breast cancer (TNBC) lacks targeted therapies and has a poor prognosis. Wild ginseng (Panax ginseng) is traditionally valued for its medicinal properties, but its scarcity limits therapeutic application. Adventitious root culture technology provides a sustainable source of wild ginseng-derived bioactive compounds. This study investigated the anticancer effects of wild ginseng adventitious root extract (WGAR) on MDA-MB-231 TNBC cells and elucidated the underlying molecular mechanisms. Methods: WGAR was prepared from cultured adventitious roots of 100-year-old wild ginseng, and its chemical composition was analyzed by LC-MS/MS. Anticancer effects were evaluated using MTT assay, acridine orange/propidium iodide (AO/PI) staining, Matrigel invasion assay, Western blot analysis, and proteome profiler array. Molecular docking was performed to predict interactions between WGAR constituents and target proteins poly (ADP-ribose) polymerase (PARP)-1 and β-catenin. Results: LC-MS/MS analysis tentatively identified 17 compounds, including ginsenosides (Rg3, Rh1, Rf) and terpenoids (ursolic acid). WGAR reduced cell viability with an IC50 of 79 μg/mL at 48 h, inducing 51.2% cell death. WGAR activated the intrinsic apoptotic pathway through sequential caspase-9 and caspase-3 activation, followed by PARP cleavage, and was associated with changes in epithelial–mesenchymal transition (EMT)-related markers (reduced N-cadherin, Slug, and β-catenin) alongside decreased inhibitory Ser9 phosphorylation of GSK-3β. Proteome array analysis revealed suppression of ECM remodeling proteins (tenascin C, u-PA) and inflammatory mediators (IL-6, CXCL8). Molecular docking predicted that selected WGAR constituents, particularly terpenoid-type compounds, may potentially interact with PARP-1 and β-catenin; however, these in silico findings are hypothesis-generating and require experimental validation. Conclusions: WGAR exerts multi-target anticancer effects on TNBC cells through apoptosis induction and EMT suppression associated with modulation of GSK-3β/β-catenin signaling, suggesting its potential as a source of therapeutic agents for TNBC.

## Linked entities

- **Genes:** PARP1 (poly(ADP-ribose) polymerase 1) [NCBI Gene 142], GSK3B (glycogen synthase kinase 3 beta) [NCBI Gene 2932], ctnnb1.S (catenin beta 1 S homeolog) [NCBI Gene 380441], CadN (Cadherin-N) [NCBI Gene 35070], SNAI2 (snail family transcriptional repressor 2) [NCBI Gene 6591]
- **Proteins:** PARP1 (poly(ADP-ribose) polymerase 1), ctnnb1.S (catenin beta 1 S homeolog), Casp9 (caspase 9), Casp3 (caspase 3), Tnc (tenascin C), PLAU (plasminogen activator, urokinase), IL6 (interleukin 6), CXCL8 (C-X-C motif chemokine ligand 8)
- **Chemicals:** ginsenosides (PubChem CID 3086007), Rg3 (PubChem CID 169408342), Rh1 (PubChem CID 394347), Rf (PubChem CID 150964), ursolic acid (PubChem CID 64945)
- **Diseases:** triple-negative breast cancer (MONDO:0005494)
- **Species:** Panax ginseng (taxon 4054)

## Full-text entities

- **Genes:** VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422] {aka L-VEGF, MVCD1, VEGF, VPF}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, PLAU (plasminogen activator, urokinase) [NCBI Gene 5328] {aka ATF, BDPLT5, QPD, UPA, URK, u-PA}, MMP2 (matrix metallopeptidase 2) [NCBI Gene 4313] {aka CLG4, CLG4A, MMP-2, MMP-II, MONA, TBE-1}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, ANXA5 (annexin A5) [NCBI Gene 308] {aka ANX5, CPB-I, ENX2, HEL-S-7, PP4, RPRGL3}, CASP9 (caspase 9) [NCBI Gene 842] {aka APAF-3, APAF3, ICE-LAP6, MCH6, PPP1R56}, CASP3 (caspase 3) [NCBI Gene 836] {aka CPP32, CPP32B, SCA-1}, VIM (vimentin) [NCBI Gene 7431], TNC (tenascin C) [NCBI Gene 3371] {aka 150-225, DFNA56, GMEM, GP, HXB, JI}, STAT3 (signal transducer and activator of transcription 3) [NCBI Gene 6774] {aka ADMIO, ADMIO1, APRF, HIES}, PARP1 (poly(ADP-ribose) polymerase 1) [NCBI Gene 142] {aka ADPRT, ADPRT 1, ADPRT1, ARTD1, PARP, PARP-1}, CDH1 (cadherin 1) [NCBI Gene 999] {aka Arc-1, BCDS1, CD324, CDHE, ECAD, LCAM}, SNAI1 (snail family transcriptional repressor 1) [NCBI Gene 6615] {aka SLUGH2, SNA, SNAH, SNAIL, SNAIL1, dJ710H13.1}, GSK3B (glycogen synthase kinase 3 beta) [NCBI Gene 2932], CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, CSF1 (colony stimulating factor 1) [NCBI Gene 1435] {aka CSF-1, MCSF, PG-M-CSF}, SNAI2 (snail family transcriptional repressor 2) [NCBI Gene 6591] {aka SLUG, SLUGH, SLUGH1, SNAIL2, WS2D}, CDH2 (cadherin 2) [NCBI Gene 1000] {aka ACOGS, ADHD8, ARVD14, CD325, CDHN, CDw325}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, FN1 (fibronectin 1) [NCBI Gene 2335] {aka CIG, ED-B, FINC, FN, FNZ, GFND}, MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318] {aka CLG4B, GELB, MANDP2, MMP-9}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}
- **Diseases:** Tumor (MESH:D009369), injury to (MESH:D014947), Inflammatory (MESH:D007249), glioblastoma (MESH:D005909), nasopharyngeal carcinoma (MESH:D000077274), hepatocellular carcinoma (MESH:D006528), necrotic (MESH:D009336), TNBC (MESH:D064726), breast cancer (MESH:D001943), Cytotoxic (MESH:D064420), tumorigenic (MESH:D002471), colorectal and gastric carcinoma (MESH:D015179), T cell lymphoma (MESH:D016399), metastasis (MESH:D009362)
- **Chemicals:** Ethanol (MESH:D000431), CaCl2 (MESH:D002122), Ginsenoside Rh1 (MESH:C425564), SDS (MESH:D012967), aglycone (MESH:C458179), CHIR99021 (MESH:C473711), Ursolic acid (MESH:C005466), Terpenoid (MESH:D013729), Water (MESH:D014867), acetonitrile (MESH:C032159), 7-AAD (MESH:C025942), streptomycin (MESH:D013307), carbon (MESH:D002244), (S)-ginsenoside Rg3 (MESH:C097367), polyacrylamide (MESH:C016679), thiamine HCl (MESH:C000712172), EDTA (MESH:D004492), ginsenoside Rg1 (MESH:C035054), z-VAD-fmk (MESH:C096713), formic acid (MESH:C030544), PI (MESH:D010716), pyridoxine HCl (MESH:D011736), formazan (MESH:D005562), PTFE (MESH:D011138), ginsenoside (MESH:D036145), AO (MESH:D000165), ginsenoside Rh2 (MESH:C055305), saline (MESH:D012965), methyl palmitate (MESH:C019012), inositol (MESH:D007294), DMSO (MESH:D004121), lime (MESH:C016538), saponin (MESH:D012503), ROS (MESH:D017382), Tween-20 (MESH:D011136), myristic acid (MESH:D019814), NAD+ (MESH:D009243), PBS (MESH:D007854), LiCl (MESH:D018021), PVDF (MESH:C024865), Hydrogen (MESH:D006859), pseudoginsenoside F11 (MESH:C413985), Rh1 (MESH:C117776), octadecane (MESH:C022883), sucrose (MESH:D013395), KI (MESH:C066186), paraformaldehyde (MESH:C003043), pentacyclic triterpenoid (MESH:D053978), CO2 (MESH:D002245), PPT (MESH:C081552), BCA (MESH:C047117), Ginsenoside Rf (MESH:C055328), triterpenoid (MESH:D014315), majonoside R2 (MESH:C098043), KNO3 (MESH:C023844), Fatty acid (MESH:D005227), ocotillol (MESH:C524540), nicotinic acid (MESH:D009525), MTT (MESH:C070243), amino acids (MESH:D000596)
- **Species:** Panax ginseng (Asiatic ginseng, species) [taxon 4054], Panax (genus) [taxon 4053], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** MCF-7 — Homo sapiens (Human), Invasive breast carcinoma of no special type, Cancer cell line (CVCL_0031), S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), MDA-MB-231 — Homo sapiens (Human), Breast adenocarcinoma, Cancer cell line (CVCL_0062)

## Full text

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## Figures

12 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12943350/full.md

## References

53 references — full list in the complete paper: https://tomesphere.com/paper/PMC12943350/full.md

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Source: https://tomesphere.com/paper/PMC12943350