# Investigation of Gene Regions Responsible for Drug Resistance in Clinical Isolates of Mycobacterium tuberculosis Complex Resistant to at Least Two First-Line Anti-Tuberculosis Drugs

**Authors:** Mahmut Ulger, Nurcihan Biltekin, Seda Tezcan Ulger, Gonul Aslan

PMC · DOI: 10.3390/pathogens15020222 · Pathogens · 2026-02-16

## TL;DR

This study identifies new genetic mutations in tuberculosis bacteria that cause resistance to multiple drugs, helping improve diagnosis and treatment strategies.

## Contribution

The study reports a novel rpsL mutation at codon 70 and a previously unreported codon 88 mutation in the region.

## Key findings

- AAG → AGG mutation was found in the rpsL gene at codon 43 and 88.
- A new GAG → GCG mutation was identified at rpsL codon 70.
- Common mutations included AGC → ACC at katG codon 315 and C → T at the inhA promoter.

## Abstract

Early and rapid diagnosis of drug resistance in tuberculosis (TB) plays a key role in reducing the spread of resistance and enabling effective treatment. The aim of this study was to investigate mutations in drug resistance-associated gene regions of Mycobacterium tuberculosis complex (MTBC) isolates resistant to at least two first-line anti-tuberculosis drugs through sequence analysis, in order to characterize the core molecular features of these strains in the region and to identify previously unreported, geographically distinct novel mutation sites. The drug susceptibility of 23 clinical isolates was assessed using the BACTEC MGIT 960 system, and resistance-associated point mutations were identified through DNA sequence analysis and comparison with GenBank reference sequences. AAG → AGG mutation was detected in the rpsL gene region at codon 43 (n = 7) and codon 88 (n = 1). Additionally, GAG → GCG point mutation was identified at codon 70 (n = 2), representing a new region not previously reported in the literature. The most frequent mutation was AGC → ACC at katG codon 315 (n = 10), followed by a C → T substitution at position −15 of the inhA promoter region (n = 4). Additionally, TCG → TTG at rpoB codon 531 (n = 4) and ATG → GTG at embB codon 306 (n = 1) were detected. The detection of resistance-associated mutations is essential for controlling drug-resistant tuberculosis. In this study, a novel rpsL mutation (GAG → GCG) at codon 70 and a previously unreported codon 88 mutation in our country were identified, contributing to the understanding of molecular resistance mechanisms and epidemiology.

## Linked entities

- **Genes:** rpsL (30S ribosomal protein S12) [NCBI Gene 881709], katG (catalase-peroxidase) [NCBI Gene 885638], INHA (inhibin subunit alpha) [NCBI Gene 3623], rpoB (RNA polymerase beta subunit) [NCBI Gene 800292], embB (arabinosyltransferase B) [NCBI Gene 886126]
- **Diseases:** tuberculosis (MONDO:0018076)
- **Species:** Mycobacterium tuberculosis complex (taxon 77643)

## Full-text entities

- **Genes:** rpoB [NCBI Gene 888164], INHA (inhibin subunit alpha) [NCBI Gene 3623]
- **Diseases:** MTBC (MESH:D014376), bacterial disease (MESH:D001424), death (MESH:D003643), pulmonary TB (MESH:D014397), multidrug- and extensively drug-resistant TB (MESH:D054908), MDR (MESH:D018088), injury to (MESH:D014947), abscess (MESH:D000038), extrapulmonary TB (MESH:D000092225), INH resistance (MESH:D060467)
- **Chemicals:** Agarose (MESH:D012685), chloroform (MESH:D002725), Thr (MESH:D013912), A (MESH:D001151), Lys (MESH:D008239), S (MESH:D013455), LJ medium (-), RIF (MESH:D012293), Arg (MESH:D001120), Ser (MESH:D012694), EMB (MESH:D004977), arabinogalactan (MESH:C005653), L (MESH:D007930), water (MESH:D014867), Glu (MESH:D018698), INH (MESH:D007538), PZA (MESH:D011718), Acid (MESH:D000143), aminoglycoside (MESH:D000617), T (MESH:D014316), MgCl2 (MESH:D015636), SM (MESH:D013307), Ala (MESH:D000409), lipoarabinomannan (MESH:C050016), mycolic acid (MESH:D009171), ethidium bromide (MESH:D004996)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mycobacterium tuberculosis (species) [taxon 1773], Mycobacterium tuberculosis complex (species group) [taxon 77643], Mycobacterium tuberculosis H37Rv (strain) [taxon 83332]
- **Mutations:** ACC substitution at codon 315, Arg) substitution at codon 43, G70A, Ala) mutation at codon 70, L43R, Arg) substitution at codon 88, S531L, Ser   Thr substitution at codon 315, M306V, L88R, T substitution at position -15, C15T, C   T, L88A, S315T, Val mutation at codon 306, TTG substitution at codon 531, L43A, 15 C, T mutation at position -15

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12943113/full.md

## References

47 references — full list in the complete paper: https://tomesphere.com/paper/PMC12943113/full.md

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Source: https://tomesphere.com/paper/PMC12943113