# Microbiological Efficacy and Cost-Effectiveness of Poultry Carcass Excision Sampling Methods in Brazil

**Authors:** Pricila Borges, Luciana Mena, Sandra Heidtmann, José Queluz, Natalia Lopes, Jaqueline Cruvinel, Michele Nesi, Juliana Schmitz, Anabile Lisboa, Viviane Colla, Christiane Huller, Brunna Dutra, Eduardo Tondo

PMC · DOI: 10.3390/microorganisms14020372 · Microorganisms · 2026-02-05

## TL;DR

This study compares two methods for sampling poultry carcasses in Brazil to check for contamination and finds that sampling neck skin is more efficient and cheaper than the current method.

## Contribution

The study introduces a more cost-effective and efficient sampling method for poultry carcass microbiological monitoring in Brazil.

## Key findings

- Neck skin sampling is statistically comparable to pooled dorsal sampling for Enterobacteriaceae counts.
- The neck skin method reduces labor time, protein waste, and costs by 99% compared to the pooled sampling method.
- Enterobacteriaceae counts in neck, cloaca, and wing regions were lower than in pooled dorsal samples.

## Abstract

Brazil is among the world’s leading exporters of chicken meat, and microbiological evaluation of carcasses is essential to verify process hygiene and safety. This study assessed the microbiological effectiveness and economic impact of two sampling methods for poultry carcasses: the excision of pooled samples of skin and muscle from multiple carcass regions, as recommended by Brazilian authorities, and the excision of neck skin alone. In accordance with Brazilian authorities guidelines requiring carcass evaluation through Enterobacteriaceae counts, these microorganisms were employed to assess contamination across different regions of 90 carcasses. Subsequently, Enterobacteriaceae counts were performed on 144 carcasses using both sampling methods. Mesophilic microorganisms, total coliforms, Escherichia coli, and Staphylococcus were tested in ten carcasses sampled by both methods to confirm the results obtained from the enumeration of Enterobacteriaceae and results were evaluated using Shapiro–Wilk, Levene, F-test, Kruskal–Wallis, Dunn, and T-test. Additionally, costs related to labor time and protein waste were quantified in 18 slaughterhouses. Results showed that Enterobacteriaceae counts in neck, cloaca, and wing regions were similar but significantly lower than those in pooled dorsal samples (p < 0.05). Neck skin samples were statistically comparable to dorsal pooled samples and exhibited higher contamination than ventral samples, demonstrating equivalent or superior microbiological representativeness. The neck skin method required less time, produced less protein waste, and reduced costs by 99%, indicating a more efficient and cost-effective alternative for microbiological monitoring of poultry carcasses.

## Full-text entities

- **Diseases:** injury to (MESH:D014947)
- **Chemicals:** peptone water (-), water (MESH:D014867)
- **Species:** Gallus gallus (bantam, species) [taxon 9031], Enterobacteriaceae (enterobacteria, family) [taxon 543], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Staphylococcus (genus) [taxon 1279], Homo sapiens (human, species) [taxon 9606], Meleagris gallopavo (common turkey, species) [taxon 9103], Escherichia coli (E. coli, species) [taxon 562], Salmonella (genus) [taxon 590]

## Full text

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## References

13 references — full list in the complete paper: https://tomesphere.com/paper/PMC12943070/full.md

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Source: https://tomesphere.com/paper/PMC12943070