# Crohn’s Disease in Malaysia: Could Application of the Precautionary Principle Reduce Future Incidence?

**Authors:** Roger W. Pickup, Pei Boon Ooi, Gaurav Agrawal, Peter M. Atkinson, Jeremy Sanderson, Raja Affendi Raja Ali

PMC · DOI: 10.3390/microorganisms14020295 · Microorganisms · 2026-01-27

## TL;DR

This paper explores how applying the precautionary principle could help reduce the rising incidence of Crohn’s disease in Malaysia by examining genetic, environmental, and microbial factors.

## Contribution

The paper is the first to summarize evidence linking MAP, genetics, and environment to Crohn’s disease in Malaysia and proposes preventive measures.

## Key findings

- Crohn’s disease incidence in Malaysia is rising and mirrors historical trends in the UK.
- Mycobacterium avium subspecies paratuberculosis (MAP) exposure through imported cattle and dairy products may contribute to CD in Malaysia.
- Preventive measures like screening cattle and dairy products are suggested if MAP is confirmed as a risk factor.

## Abstract

Inflammatory bowel disease (IBD) comprises mainly Crohn’s disease (CD) and Ulcerative Colitis (UC). The Western model suggests that environmental factors, immunological factors, the gut microbiome, and genetic disposition all contribute to the onset and sustained symptoms that define CD, although the pathogenesis of CD remains unresolved. Current studies propose that in individuals who are genetically susceptible, genetic factors linked to immune dysregulation, in combination with environmental exposure, can result in dysbiosis of the gut microbiome and intestinal barrier dysfunction, leading to immune dysregulation. In Malaysia, the incidence of IBD is rising with CD increasing disproportionally compared to UC, and the incidence of CD currently mirrors that of the United Kingdom in the 1930s, which now has one of the highest incidences worldwide. Given the suggested role of Mycobacterium avium subspecies paratuberculosis (MAP) in CD in Western countries, which is subject to some controversy, this review summarises for the first time the current evidence on genetic, environmental, and microbial factors that could contribute to the rise of Crohn’s disease in Malaysia and proposes preventive approaches. We note the increasing reliance of Malaysia on imported cattle and milk products from areas of high Johne’s Disease prevalence to meet increasing demand and changes in milk preferences in the Malaysian population, both key indicators for human-MAP exposure in the Western model. Therefore, should MAP be shown to be associated with CD in Malaysia, some preventative measures are suggested, such as screening imported and native beef and dairy cattle, dairy products and ultimately water, both recreational and potable.

## Linked entities

- **Diseases:** Crohn’s disease (MONDO:0005011), Ulcerative Colitis (MONDO:0005101), Johne’s Disease (MONDO:0025449)

## Full-text entities

- **Genes:** TNFSF15 (TNF superfamily member 15) [NCBI Gene 9966] {aka TL1, TL1A, TNLG1B, VEGI, VEGI192A}, IL23R (interleukin 23 receptor) [NCBI Gene 149233] {aka PSORS7}, LCT (lactase) [NCBI Gene 3938] {aka LAC, LPH, LPH1}, LINC00824 (long intergenic non-protein coding RNA 824) [NCBI Gene 101927774] {aka LINC01263}, CARD9 (caspase recruitment domain family member 9) [NCBI Gene 64170] {aka CANDF2, IMD103, hCARD9}, IBD5 (inflammatory bowel disease 5) [NCBI Gene 50941], ATG16L1 (autophagy related 16 like 1) [NCBI Gene 55054] {aka APG16L, ATG16A, ATG16L, IBD10, WDR30}, NOD2 (nucleotide binding oligomerization domain containing 2) [NCBI Gene 64127] {aka ACUG, BLAU, BLAUS, CARD15, CD, CLR16.3}, DLG5 (discs large MAGUK scaffold protein 5) [NCBI Gene 9231] {aka LP-DLG, P-DLG5, PDLG, YUVOB}, JAK2 (Janus kinase 2) [NCBI Gene 3717] {aka JTK10}, PTPN22 (protein tyrosine phosphatase non-receptor type 22) [NCBI Gene 26191] {aka LYP, LYP1, LYP2, PEP, PTPN22.5, PTPN22.6}, HLA-A (major histocompatibility complex, class I, A) [NCBI Gene 3105] {aka HLAA}, TLR4 (toll like receptor 4) [NCBI Gene 7099] {aka ARMD10, CD284, TLR-4, TOLL}, ATG16L2 (autophagy related 16 like 2) [NCBI Gene 89849] {aka ATG16B, WDR80}, STAT3 (signal transducer and activator of transcription 3) [NCBI Gene 6774] {aka ADMIO, ADMIO1, APRF, HIES}, IRF5 (interferon regulatory factor 5) [NCBI Gene 3663] {aka SLEB10}, IRGM (immunity related GTPase M) [NCBI Gene 345611] {aka IBD19, IFI1, IRGM1, LRG-47, LRG47}
- **Diseases:** rheumatoid arthritis (MESH:D001172), Lactose malabsorption (MESH:D007787), Indeterminate Colitis (MESH:D003092), Microscopic Colitis (MESH:D046728), GI disease (MESH:D005767), sarcoidosis (MESH:D012507), immune-related diseases (MESH:D007154), infected (MESH:D007239), CJD (MESH:D007562), CD (MESH:D003424), IBD (MESH:D015212), Type 1 diabetes (MESH:D003922), zoonotic diseases (MESH:D015047), fistula (MESH:D005402), intestinal disease (MESH:D007410), multiple sclerosis (MESH:D009103), immune dysregulation (OMIM:614878), UC (MESH:D003093), JD (MESH:D010283), fibrosis (MESH:D005355), Chronic inflammation (MESH:D007249), abscess (MESH:D000038), coeliac disease (MESH:D004194), injury to (MESH:D014947), perianal fistula (MESH:D000694), autoimmune conditions (MESH:D001327), Immune-mediated diseases (MESH:C567355), strictures (MESH:D003251), Hashimoto's thyroiditis (MESH:D050031)
- **Chemicals:** n-6-polyunsaturated fatty acids (-), calcium (MESH:D002118), n-3 polyunsaturated fatty acids (MESH:D015525), Water (MESH:D014867)
- **Species:** Adenoviridae (family) [taxon 10508], Homo sapiens (human, species) [taxon 9606], Mycobacterium (genus) [taxon 1763], Myceliophthora sp. AP (species) [taxon 1176335], Bos taurus (bovine, species) [taxon 9913], gut metagenome (species) [taxon 749906], Cryptosporidium (genus) [taxon 5806], Escherichia coli (E. coli, species) [taxon 562], Ovis aries (domestic sheep, species) [taxon 9940]
- **Mutations:** rs10954213, rs1123567, rs6651252, rs2241880, rs2277680, rs3807306, rs10974944, rs4986791

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## References

131 references — full list in the complete paper: https://tomesphere.com/paper/PMC12943012/full.md

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Source: https://tomesphere.com/paper/PMC12943012