# Uncovering the Prokaryotic Diversity of Hypersaline Soils of Odiel Saltmarshes Natural Area Through Metagenome-Assembled Genomes

**Authors:** Cristina Galisteo, Fernando Puente-Sánchez, Rafael R. de la Haba, Stefan Bertilsson, Antonio Ventosa, Cristina Sánchez-Porro

PMC · DOI: 10.3390/microorganisms14020489 · Microorganisms · 2026-02-18

## TL;DR

This study explores the diverse microbial life in hypersaline soils of Spain, revealing new prokaryotic species adapted to extreme conditions.

## Contribution

The study introduces six novel Candidatus prokaryotic taxa and their genomic adaptations to extreme salinity and heavy metals.

## Key findings

- Six high-quality metagenome-assembled genomes (MAGs) were reconstructed from hypersaline soils.
- The genomes revealed metabolic traits enabling survival in high salinity and heavy metal conditions.
- The findings expand the catalog of known prokaryotic diversity in extreme environments.

## Abstract

The hypersaline soils of the Odiel Saltmarshes Natural Area in Southwest Spain harbor highly diverse microbial communities adapted to extreme conditions. However, their genomic diversity remains largely unexplored. In addition to high salinity, these soils are contaminated with heavy metals, creating a hostile environment of great interest for studying extremophilic microorganisms and their metabolic adaptations. This study aims to characterize the uncovered prokaryotic taxa as Candidatus species inhabiting the hypersaline soils of the Odiel Saltmarshes, based on their metagenomic assembled genomic sequences. The reconstructed genomes were assessed for quality based on completeness and contamination thresholds and subsequently taxonomically classified. Comparative genomic analysis of six high-quality MAGs revealed key metabolic traits related to survival under extreme salinity and heavy metal conditions. The findings provide new insights about microbial diversity of hypersaline environments and expand the catalog of known prokaryotic genomes. Detailed characterization of six novel Candidatus taxa highlights the unique adaptations of these microorganisms, enhancing our understanding of life in extreme habitats.

## Full-text entities

- **Genes:** ARSA (arylsulfatase A) [NCBI Gene 410] {aka ASA, MLD}, STS (steroid sulfatase) [NCBI Gene 412] {aka ARSC, ARSC1, ASC, ES, SSDD, XLI}, COPA (coat protein complex I subunit alpha) [NCBI Gene 1314] {aka AIAISD, AIAISD1, AILJK, HEP-COP, alpha-COP}, HSD17B8 (hydroxysteroid 17-beta dehydrogenase 8) [NCBI Gene 7923] {aka D6S2245E, FABG, FABGL, H2-KE6, HKE6, KE6}, MAG (myelin associated glycoprotein) [NCBI Gene 4099] {aka GMA, S-MAG, SIGLEC-4A, SIGLEC4, SIGLEC4A, SPG75}, ARSB (arylsulfatase B) [NCBI Gene 411] {aka ASB, G4S, MPS6}, NOC2L (NOC2 like nucleolar associated transcriptional repressor) [NCBI Gene 26155] {aka NET15, NET7, NIR, PPP1R112}
- **Diseases:** injury to (MESH:D014947)
- **Chemicals:** ectoine (MESH:C045628), Cadmium (MESH:D002104), arsenic (MESH:D001151), lead (MESH:D007854), arsenate (MESH:C025657), heavy metal (MESH:D019216), arsenite (MESH:C015001), Amino (-), glycine betaine (MESH:D001622), sodium (MESH:D012964), potassium (MESH:D011188), lactobionic acid (MESH:C005608), arginine (MESH:D001120), carotenoid (MESH:D002338), copper (MESH:D003300), silver (MESH:D012834), hals (MESH:D005474), biotin (MESH:D001710), gold (MESH:D006046), Metals (MESH:D008670), metalloid (MESH:D058955), Zinc (MESH:D015032), ammonia (MESH:D000641), salt (MESH:D012492), nitrate (MESH:D009566), N2 (MESH:D009584), choline (MESH:D002794), menaquinone (MESH:D024482)
- **Species:** Pseudomonas taetrolens (species) [taxon 47884], Thiohalophilus (genus) [taxon 445670], PX clade (clade) [taxon 569578], Rhodovibrio (genus) [taxon 85274], Longimicrobium sp. (species) [taxon 2029185], Nitrospina watsonii (species) [taxon 1323948], Thiohalobacter (genus) [taxon 1273155], Silicimonas (genus) [taxon 1955420], Hemicycliophora onubensis (species) [taxon 2126612], Nitrospinia (class) [taxon 1293498], Martensia sp. 3 (species) [taxon 159501], Chromohalobacter sarecensis (species) [taxon 245294], Haloarcula (genus) [taxon 2237], H. roseum [taxon 48946], Wenzhouxiangella sp. (species) [taxon 1979961], Gracilimonas (genus) [taxon 649462], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Homo sapiens (human, species) [taxon 9606], Nitrospina gracilis (species) [taxon 35801], Rhodohalobacter (genus) [taxon 1974209], Halorubrum (genus) [taxon 56688], Acidobacteriota (phylum) [taxon 57723], Fodinibius (genus) [taxon 1397106], Halobacteriales (order) [taxon 2235], Rubrimonas (genus) [taxon 89523], Halobaculum (genus) [taxon 43927], Halomarina (genus) [taxon 871740], Halofilum (genus) [taxon 2045120], Coleofasciculus (genus) [taxon 669368], Methanobacteriota (euryarchaeotes, phylum) [taxon 28890], Thiohalorhabdus (genus) [taxon 492233], Erythrobacter (genus) [taxon 1041], Longimicrobium terrae (species) [taxon 1639882], Salinimicrobium (genus) [taxon 561367], Halomonas (genus) [taxon 2745], Halomicronema (genus) [taxon 170610]
- **Cell lines:** U6272 — Homo sapiens (Human), Fibrosarcoma, Cancer cell line (CVCL_A3FC), M2_2A_ — Homo sapiens (Human), Transformed cell line (CVCL_ZU46)

## Full text

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## Figures

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## References

113 references — full list in the complete paper: https://tomesphere.com/paper/PMC12942990/full.md

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Source: https://tomesphere.com/paper/PMC12942990