# Identification of Steroidal Alkaloids with In Vitro Antiprotozoal Activity from Holarrhena pubescens Wall. ex G. Don

**Authors:** Justus Wambua Mukavi, Monica Cal, Marcel Kaiser, Pascal Mäser, Njogu M. Kimani, Leonidah Kerubo Omosa, Thomas J. Schmidt

PMC · DOI: 10.3390/molecules31040733 · Molecules · 2026-02-20

## TL;DR

This study identifies new steroidal alkaloids from a tropical tree that show strong antiprotozoal activity against diseases like malaria and African trypanosomiasis.

## Contribution

A new steroidal alkaloid with potent antiplasmodial activity and high selectivity was isolated and characterized.

## Key findings

- Compounds 2 and 16 showed the highest antitrypanosomal activity with IC50 of 0.2 μmol/L.
- New compound 5 exhibited the strongest antiplasmodial activity with IC50 of 0.7 μmol/L and SI of 43.
- PLS regression modeling helped identify compounds responsible for antiplasmodial activity.

## Abstract

Human African Trypanosomiasis (HAT) and Malaria are serious infectious diseases endemic in tropical regions, caused by protozoan parasites, and necessitating an urgent development of new antiprotozoal drugs. As part of our ongoing search for new antiprotozoal steroidal alkaloids from plants, we investigated the methanolic stem bark extract of Holarrhena pubescens (Apocynaceae). H. pubescens is a tropical tree that some Kenyan coastal communities have long used to treat various ailments, including fever and stomach pain. The crude extract, alkaloid fraction, and 16 subfractions acquired through centrifugal partition chromatography (CPC) displayed promising in vitro antiprotozoal activity against Trypanosoma brucei rhodesiense (Tbr) and Plasmodium falciparum (Pf). Partial least squares (PLS) regression modeling of UHPLC/+ESI QqTOF-MS data and the antiprotozoal activity data of the crude extract and its fractions was performed to predict compounds that may be responsible for the observed antiplasmodial activity. Chromatographic separation of the alkaloid fraction afforded one new steroidal alkaloid (5), along with 18 known compounds (1, 2, 4, 6–20), and one artifact (3) that was presumably formed during the acid–base extraction process. The structural characterization of the isolated compounds was accomplished using UHPLC/+ESI-QqTOF-MS/MS and NMR spectroscopy. The isolated compounds were tested for their in vitro antiprotozoal properties against the two aforementioned pathogens, as well as for their cytotoxicity against mammalian cells (L6 cell line). Compounds 2 and 16 (IC50 = 0.2 μmol/L) demonstrated the highest antitrypanosomal activity, with compound 2 showing the highest selectivity (SI = 127). The new compound 5 exhibited the strongest antiplasmodial activity and selectivity against Pf (IC50 = 0.7 μmol/L, SI = 43). Our findings provide further promising antiprotozoal leads for HAT and Malaria.

## Linked entities

- **Chemicals:** compound 2 (PubChem CID 5494425), compound 3 (PubChem CID 20788885), compound 5 (PubChem CID 139170067), compound 6 (PubChem CID 642458), compound 16 (PubChem CID 122517023), compound 20 (PubChem CID 156271)
- **Diseases:** Human African Trypanosomiasis (MONDO:0005459), Malaria (MONDO:0005136)
- **Species:** Trypanosoma brucei rhodesiense (taxon 31286), Plasmodium falciparum (taxon 5833)

## Full-text entities

- **Genes:** PCSK1 (proprotein convertase subtilisin/kexin type 1) [NCBI Gene 5122] {aka BMIQ12, NEC1, PC1, PC1/3, PC3, SPC3}
- **Diseases:** cytotoxic (MESH:D064420), amoebic dysentery (MESH:D004404), deaths (MESH:D003643), infectious diseases (MESH:D003141), Malaria (MESH:D008288), HAT (MESH:D014353), liver disorders (MESH:D017093), stomach pain (MESH:D013272), influenza (MESH:D007251), injury to (MESH:D014947), protozoan diseases (MESH:D011528), hemorrhoids (MESH:D006484), fever (MESH:D005334), jaundice (MESH:D007565), diarrhea (MESH:D003967)
- **Chemicals:** TFA (MESH:D014269), K (MESH:D011188), iso-hexane (MESH:D006586), potassium iodide (MESH:D011193), Na (MESH:D012964), formamide (MESH:C031066), 2H (MESH:D003903), 3beta-aminoconamine (-), ethyl acetate (MESH:C007650), pyrrolidine (MESH:C032519), pregnane (MESH:D011278), chloroquine (MESH:D002738), Wrightiamine A (MESH:C480247), pyrroline (MESH:C013231), H (MESH:D006859), CO2 (MESH:D002245), ketone (MESH:D007659), CH3CN (MESH:C032159), C (MESH:D002244), CH2Cl2 (MESH:D008752), podophyllotoxin (MESH:D011034), N (MESH:D009584), oxygen (MESH:D010100), silica gel (MESH:D058428), CH3OH (MESH:D000432), 3H (MESH:D014316), alkamines (MESH:C040543), melarsoprol (MESH:D008549), bismuth subnitrate (MESH:C010804), pregnene (MESH:D011283), B (MESH:D001895), Conessine (MESH:C007111), 13C (MESH:C000615229), sodium hydroxide (MESH:D012972), artemisinin (MESH:C031327), HCl (MESH:D006851), methylenes (MESH:C030011), ACN (MESH:C084683), Alkaloids (MESH:D000470), C-6 (MESH:C117224), H2O (MESH:D014867)
- **Species:** Plasmodium falciparum (malaria parasite P. falciparum, species) [taxon 5833], Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116], Pf [taxon 1985359], Leishmania donovani (species) [taxon 5661], Holarrhena pubescens (Tellicherry bark, species) [taxon 69381], Thermomyces sp. BR (species) [taxon 1176339], Trypanosoma brucei rhodesiense (subspecies) [taxon 31286], Buxus sempervirens (species) [taxon 4002], Pachysandra terminalis (species) [taxon 74825], Trypanosoma cruzi (species) [taxon 5693]
- **Cell lines:** L6 — Mus musculus (Mouse), Hybridoma (CVCL_XK50)

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## References

45 references — full list in the complete paper: https://tomesphere.com/paper/PMC12942945/full.md

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Source: https://tomesphere.com/paper/PMC12942945